Contig Data
morexGenes
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Map Locations of contig_156772 (3138 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_156772

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14291 2 949 bp AK376803 Not available Available None
MLOC_14293 2 2013 bp MLOC_14293.2 Available Available LOC_Os03g53900.4, FRAME:-2, EVALUE:3e-79, 13103.m05903 protein universal stress protein domain containing protein, putative, expressed
MLOC_14292 1 864 bp None Available Available None





CDS Structure of MLOC_14291






CDS Structure of MLOC_14293






CDS Structure of MLOC_14292






Contig Sequence (3138 bp)

>contig_156772 3138 assembly3_WGSMorex_rbca.fasta
TCACAGGTAATTCAGTTCTGATGCATCTGTTCTAATACTTTTATGGAATTATATATAGGG
GCTGCTGATTGTGTGCGTTTGTTAGATTTTGTTTGCAATCAAGGGTGAACACTATGATCG
TACTATCATCTCCATCGCTGGAAAGTTTGTGCCTATACCATTGCTTCTTTCCTTCAGACT
TAAACATTTGGTATCACATCTCATTAGAGCGAGCGTGTGACCTATGTAGCTGAGATTACT
TTGGATTGAGCGCAACATCGGCAGCTTATATTTATAATTTGGAACCAAACATCANNNNNT
TATTCTTGTATGTGAATGTTCTCTTGAAAATCTTAGTTGTATTCTTTGGAGCTTATGTGT
ATATATATCTCTGTGTGTGTGTAGTCGTCACTAGTTGACAATTTAAGTATCTTGATACCT
CGTAAATTTTGTAATAACATCTTATATTATGGGCCAGAGGGAGTAGAAAACATTGCTGGT
GTTGTTTTGTGAGAAGTCAATATGGATCAAAATTTGTAATTCTGAATCATCCGTTTTCTT
TCTCTAACGCTTTTGATTCATGCTTCTTTCGTCAGGGGAAGTTCAGAAGGACCGCGCACT
GGAGCTCCTAAACGTGCGCCCCTGCGGTTTCAAACCTCAGCACTCGAACAAACTGGGAAA
TGTGTTCCGGCTGTTCACGAATTACGACCCGGTAGACAGACTTGGTGGCTGGGATCGGAG
CGATGGCGCCCCGGTTTAGCCATGCCAAGTTGTCCATGGCTCTGGTCGTTCATTACATAT
TTACATGCTTAGAAACTGGACATGTCTTGGGCAAGTACAGAGATGTCCATCCTATGGATA
CTCTGATATGATGCATCTTTCAGTCATGTGCTGTCAGGTTTTTTTTCATTTAGAAATTGG
ACACAACTTTGGTAATGTTTCTCTTTGATACATATGTGTACTGTCATGTATTAGGTGAAC
CAAGTTCTTCACAAATGTTCCTGTCTTGAGCCACATGGCCGTGATTGAGATTGAGACTAA
ACTTCTGGACGTACTACACATGATCGAGATGCTTGCACACCAAACGTACTACACAGGATC
TCGATCACTCCATCTTCTAAGTCGTTATTGGAAGCACAAGTCGCTTGATGCAGTACAGTA
GTAGTTATGAACAAGTAGATGTGGTTCCCTTTGGCCGGGCTTCACTTGTGGTGCGCTTTG
TTGGGCGGCTTGACGATGAGGACGGGACAGGAGGCGTGATGTGCGAGGTAGTCGCTCACG
CTGCCCAGCAACGCCCTGCAACACACCACCAGCACAAGGTCACGAAGACGATTGATATGT
TAGTTACATGGAGGCCATGGCGATCGGCGCGTACCTCTTGATCATGCCCAGGCCGCGGCT
GCCGAGGACGAGGAGGTCGGCGCGCGCGTCCTCCACGGCCTGGCAGATGGCCTCCTTGGC
GTCGCCCTCCACCACCGCCGCCGTGGCGCTCACCTGCTTCTGCCTGCACACGTCCAGCGC
GCGGGCCACCGCCTTCCGGGAGTTCTCCGCCTGCGCCCTCCTCATGGAGTCCATCGCCGT
CGGCGGCGCGTAGGCCAGGCCTGCTTCCACAGTCCACGACGCCGCACGCACGCACCAACC
AGGTGTGTCAGTGGAGCGCCCCGAGCTCAGAGTTCAGACGGTTAGCGCGCGTGAGGATGC
TTAGCTCACCGTGGGCGGCGACGGGGTAGACGAAGTGGTCGACGGGGTGCTGGGCGTGGA
CGACGACGACGGACGCGCCGGGGTGGTGCCGGACGACGTTGTCGAGCGCCCACGAGAGCG
CGTGCAGGCTCTCCTCGCTCGCGTCCACCGCCGCCACCACCTTCATCGTCGTGACCTCCG
CTCCAGGCGCCATGCCGCTCGCCATGGCCACGGCCTCGGCGCTCGCCTCCTCCATATAAC
GATGCCTTCACTTGCGGTGAGAGTGAGACCAAGACCGGCTTCGTGCCTGGCGATCGCTGC
CTCGATCGACCACATCGCCTGTCGTATATATATATGCGCGCGCGCGCGCACGGTCGGCGC
CGCTGGCTTTTGGATGTGAACGGCACGGGATAGATGGATGGATGGATAGAGATGGGGAGC
GAGACGCGGTGGCTTTTGGTCCGTAGCTCCCGCCGTGCGTGCGTTCGTCAACTCCTGCTC
GCTTGCGGCGGTCGGACGGTGTATCTTGGCTTCATTGGGCCGTTGAGTTTGGCGCGTCCC
CTGCTCGCGGTCTGCTCCGGGGATTCGCACAAGTGCCCACTGCCCAGAACCAGAAGCCTT
GTCAAGCCACCGAAAACCGTAGAGCCTTTTTTTTAGTGCTAATAACTAACGAACATAGGG
GAGGGCGTCAAATGCAGCCTCAAGGGAAGCGCGGCTCTCAACAAAAGTGTCACTCGATCG
TGCGAGATGGCGTCGGGCTCGAGTGGATCGTGCGAGACATGCGATACGAGATGGTGTGTC
TCCTTCGCCGTCGATATCGGCTCGCGGCAGCTACGCTTTGCCGACGGCGAGCTGCTTCTC
CGACGGGAGGCTCTCAGGTTAGTACTGAGGGATGCGAGAGGGGTTACCATCGATGCTCGG
TGCCTTCGGGAAGGGGAAACCCTAGATATTGATGTCATGGTGGCGTTCCCCTGTTACTTC
GCGAGAATTCGAGATCGGCTGCCGGAGAATTGGGCTCCGGTGAGGGCGGCCGAGGATACG
GCGTCAGCCAGGAGGAGGGGAACGATGGGTGGGGGTGATGTCGCGCCAGGTGGGGTCGAG
GCGGGCCCTGCCTCCAACAGTGCGCCAATGGCGGATGGGCGACACGTGGGAGGAAATCGG
AGCGCTCGTTTTGGCTCCGATGGCAGTATAAAAGCCCCCACCGCGCCGAGACTTGACCTA
GAGGAATCATTTTCCCATTTCTGGTCGGCGCAGCCTAGAAGCCCTAGATCGAGAGCGAGC
GATTCCTTCGGTTGGTGGAGAGGGAAGGTTGGAGGAGATCTGCGATCCTTCGCGGTGGTG
GCTGCGTCTCCTCCTACGATGGGGGGTGGAGGTCGAGGCTTCCGAGGAGAGCGACGGGGG
GAGCCTGGTCGTGGTGCTCGCGGGCCCGGTCATGCTCCTGGACGGGGCGGGGGCCGTGAT
GGAGACCGGAGCAAATAC