morexGenes - Barley RNA-seq Database

Contig contig_156763
Source Contig contig_156763
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_156763 (6140 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_156763

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14239	2	1824 bp	MLOC_14239.1	Available	Available	LOC_Os09g32550.2, FRAME:+3, EVALUE:0.0, 13109.m03247 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
CDS Structure of MLOC_14239

Contig Sequence (6140 bp)

>contig_156763 6140 assembly3_WGSMorex_rbca.fasta
CCCTACTTAAACCCCACCCCCCCTCCTCCGGTCCTCCACACGTCAACGTTCGCTCGCTCT
CCAACAACGACTCCGCACGACCATGGCGGCATCCATGCCGGCCTCCCCCCTCCGGCCGCT
CCTCCTTCTCCTCCTCGCCGCCCTCGCCTGCCACGGTAAGCCATCCCTCCGTCCCCTCAC
CCGACCCGACCCACCCTGAGCTAGCTGATGATTGACGTGCGCTATGTTGATCTGTCCGTT
TCTTTGCTCCTGCAGCGGCGGACACGAGCTGGAGCGGGAGCCCCTTCCGCCACGGGCGCG
GCCGCGGCCTCGGCGTCAACTACGGCAGGGTGGCGGACGACATCCCGACGCCGCGGCGGT
CCGTGCAGCTGCTGCGCGCGGCGGGGGCGGGCTCCGTCAAGATCTACGACGCCAACCCGG
CGGTGCTCCGCGCGCTGGCCGGCACGGGCATGGCGGTCTCCATCATGGTGCCCAACCAGG
TCATCCCGGACCTTGCCGCCTCCTACGCCGCCGCCGACCGCTGGGTCGCCGCCAACCTGC
TCCCCTACCTCCCGCGCACGCGGGTCAAGTTCCTGCTCGTCGGCAACGAGGTGCTCTCCG
ACGGCTCCATCGCCGCCTCCACCTGGCCCCGCATCGTGCCGGCCATGGAGAACCTCCACC
GCAGCCTCCGCGCGCGCCGCGTCAGCCGCGTCAAGCTCGGCACCACGCTCGCCATGGACG
CGCTCGTCGCGGGCGCCTTCCCGCGCCCGCCCTCCGCCGCGGCGTTCCGCCCCGACATCG
CCGAGTCCGTCCTGCGCCCGCTGCTCCGCTTCCTCGAGGGCACCAACTCCTACTACTTCG
TCGACGCATACACCTACTTCGTCTGGGCCGGCAGCAACGGCACCGTCCCGCTCGACTATG
CGCTCCTCCAGCCCGCCACGCGCGCCCGCTACGTCGACCCCGGCACGGGCCTCACATACA
CAAACCTGCTCGACGAAATGCTCGACGCCGTGGGCGCCGCCATGTCCAAGCTCGGCCACG
GGGGCGTCAGGATCGCCGTCGCCGAGACCGGCTGGCCCAACGGCGGCGACTACGACCAGA
TCGGCGCCAACGTCCGCAACGCCGCCGTCTACAACAGGAACCTCGCGGCGCGGATGGCCA
GGAACCCCGGCACGCCAGCGCGGCCGGGCGCCAGGATGCCCGTGTTCGTCTTCTCCCTCT
ACAACGAGAACCTCAAGCCAGGCCCGGGCACCGAGCGCCACTGGGGGCTCTACTACCCCA
ACGGCACGGCCGTGTACCGGGTCGACCTCACCGGGCGGCGGCCGCTGTGGGCGTACCCGC
CGCTGCCGGCGCCGGAGAACGACACGCCGTACAAGGGCCAGATATGGTGCGTGCTGGCCG
CCCACGCCGGCAGGAAGCTGAACGAGACGGCGGTGGGGGACGCGCTGACGTACGCGTGCG
GGCAGGGGAACGGGACCTGCGACGCCGTCCAGCCCGGCGGCGAGTGCTTCCAGCCCAACA
CCGGCGCGGCGCACGCCAGCTACGCCTTCAACTCCTACTGGCAGCAGTTCAGGAAGACAG
GTGCTACGTGCTACTTCAACAACCTCGCAGAGCAGACCATCAAGGACCCAAGTAAGCATG
CACAAACTCAACACTCCTGCTCTACACATTCTGAAATTAACTACTGCTACTCCAAATTGT
ATGCGCTTAAATGATTTATGCGTTGCAACTAGATTATTTGAGCTAGTGCGTTGGGTTATT
GAAACTGTGTACCCTTGGCGTCGATTAGCAGTACCTGGTGAACAGAATACATAGTACATT
TTTCAGATGAACAAAACAAAGTAATGTCTTCGGTTTCTTTAGCTGGACGTGGGATGAACC
TTCTGAAACTAGCCAAGGATATAGTACAGTTTAGGAGAACGGTACAGGACCAGCTTGGTT
CTAGGTATGATCGGGGGTGATTAAATTAAACTGCTCTAACTTGTCACCTGAGATTACATC
GGGTTATTCAAATGACCAAATCTGGATCAGGTCATTCCAAACTAGGAGATCCTTCCGATG
CAGTCTTAGCTGTTATGAAGGGTTTACTTATTATAATGCTGATTAGGGCGATGAAATCAA
ATTGCCCTAATGTCTCTCCTAATATTATACTAGACGTCCCTCTTATGATCCATTTGGTGT
ACTGCATATGATATCTTAGGCAGGTAGTTCAGTGAAGAGATTAGGATCGAGATATTTGAA
AATGCTTACCACTTCCTAGTAGTTGCTAGCCTGTAAGCTTTAGTTCTCTATTGCCCATAG
CTGATTGATTACTTGGATAATTTATTCTGCTAATGATACATGAGGATTATAATGGAATTG
TGCGGGGAATAAGGCAACTACTTATTATGCAAACAGAGTTGACCCACAGCTTGGAGATCC
AGATATTGGTATGCACAAGATGCTTGTGCATTAGACCTGTTGTTGTGAAAATATATTCAG
CAGCCATAGTGTTGACCCAACACATTTGGATCTCGATTGTTTTATCTATTGTTTTAAGCA
CAAGCACAAGCACAAGTAGAAGCTTGTTTCTGACAACTTCATCTTATGGAATGAGATGAA
CACACTGTTCGCTGTAGAGCGTCATGAACCCTTCCCAGTGAACATTTAACACTAATGGTT
TCATTTTACTGACTGGGTGTGAATAGGTATGGCTCTTACAGTCTAACAGTTGGGAGTTCA
GCAGTTATGCACTTGTTGAAGCTAGTATCTGCAACCAACACCACATTGGCATCGTTTTCG
AAAGAAAAAAAACACCACATTGGCATCGTTTTCGAAAGAAAAAAAACACCACATTGGCAT
TGTGACATGCAGTAGGAAACATCTTTCTAACATTATGGCACAGAAATCCTACCAGAGCCC
CATGTATATCTGGGTCGCCGATAAAAAAAATGTTCTGAGATGATCAGGTTGCAGTTACCA
TCCTTGCTCTGAAAGGTCCATTCAGATAGGGTAGTAGAGTTGGCTGTCGTTTTTCGATTT
CTTTTATATGCTAAACCCATGTGCACTGCGGTCTTCTGTTCGTTGATCGAGTCAAAGTCC
AACCGCACATTTCACGTCACCTTTGGATACCCTGCACTGCCCATCTGCCATCAGCATGAT
CATGGCAGGCAGTGATTATCTGATACATTGAAAGTGATACAGAAACAAAAAATTCTGCAC
AGCCATGGTTTCAGGTGTTAGCACATAGAGTATTTGGAGACATCAGGGATTGGTATGCGG
AACATACTCTTTATGCTGAATTCTCATGCGCTTATGCATGAACCCTGTAGTCCTTTAGCC
TGTTATTATTATGCATAAGCGGAAGAGGATGGCTTTGAGTGTCGACAGGTGTAGGTGAAA
CGTTCTGCATATTCATAATACCGTATAGTTCCCATCAGTTCACCACCTGCTCTGCTTGCT
TGCGTGCCTTTCCTTCAGTTCTTTTAGCTAGTCACTTTAGCTGAAACACGGACTTGCAGA
TTGTTACTTTGGTCACTGAAAAGTATGCAAGACCTTTCCATTATTACTCAAAGGAGTAAT
CAGAATCTCCAGCTAGAAACCACAAACACTAACCACAAATTATTACTCCCTCCATCCGAA
AATACTTGTCATAAAAATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTT
TATTCATTTGTATGATAAGTAATTCCGACGGAGGGAGTATATATTACTTGTACGTGTATA
TTATCGGTTTCTGCTAGCTGAATCAACTCTTTGTTTTTACTCTGATCTTGATATTCAATT
GTTTTATAGCCTTTGGTTCTTGTTACTAACTGGTTGGTTGTGCCTCTCACTGCAGGCCAC
GGATCGTGCAAGTTCAGGAGTTCATTGGGCTGATTGATTCACACATTGAGGGAGGACACT
GAGGGTGATGTATTATGATCCTACTGATGTTCTCAAACCTTGTGATGTAACAGTGACAGC
TGACCGTCCGTTTGACCATTTTTCGTTTTTCGTGGTGGTTAGGCAGGCCGTTGTCCTTTT
TGTTGTATCAAAATCATCATTCATGCACGTCATCTGTTGACGGTTGAAATGATAGTCACT
CTGATTTCATTGTTACTGGCTCCTGTCTTGCTAATCATGTCGCTTGCACGAACCCTTTTA
CCCAATGTCCCCATCTCTACTACTGGAATGCAATGTTCAGTTGCCTATTTCACTCTGCGG
CTCTATGGCCTTGTGCACGATTGCACAAAGCCACGACGTATCTCTCACTCGTTTCCATCA
CTGAACCTTTCTTGTTGAAGCTACTAGTATCTACAACCAACCCCACATTAGCAAAGTGAT
ATGCAGTAGAAAATATCTTCCTAACTTTATGTCACAGAGAATCCTACCATAGCACTATGT
ACATCTATTCGCTGACAAAAAAATTGTTCTGAGATGATCAGGTTTGCAGTTGCCATCCTT
CCTCTGAAAGATCCATTCAGATAGACATGGTAGAGTTGGCTGTCGTTTCTCCGTCGTTTT
ATAGTGCTAAACCCAGGTGCACTGCGGTCCTCCGTTGGTTGATCGAGTCAAAAGTCCAAC
TGCACATCTCGCGTTACCTTTGGATCCCCTGCATCTGCGTTGCCCGTCTTCCATCGGCAT
GAGCATGGCACGCATTGGCTATCTGAATCGGCAGTCCTTGTTACATCTTGGACATTTGAA
ACAAATTTTCTGCACAGGGCACAGCCATTGCTTTAGGTTTTAGCACATATTTAGAAACAT
GATGGTTCAGTATGCAGAACATTTCGTACGCTTTTGTCGAGTTGTCGTAAGCAGAAGATG
ATGGGTGTTGAGTGTTGATAGCTGTATAAAAGGCCTTTCCATACTTACTTAAAGAAGAAA
TCAGAATCTCCAGCTACAATGATTCTTACCGATGCATATCAATGATTCTTGAGGACTTAA
TTATTGCACTGCCACTTCTGAGAAGCTTTACTCGTAGCTATATATATACGATGACTGTAT
GAGCGGTTTCTACTAGCTGAAGCAACTCACCTCTGATGTCGACATGCAACTGCTTTGCTT
TCATTAGCCTTTGGTTGTCGTTAACTGGTTTCTATTAGCGTTTGGTTGTTGTTAACTGGT
TAATAATTCCGCCTCTCACTGCAGGCTACGGATCATGCAAGTTCCACCGTTCATTGGGAT
GATTGATCTACACAAGGACATGGAGGGAGGATAGTGAGGGGGGGGGTGTATGATCATGAT
TAATTTCAGATGTAACAGTGATCGTTATTTTTGTAAGAAGTCTTAGACATCTGAAATCGA
GGGGGCGTCATCTAGTGAATGGCAGAGATGAAATGGTACTCCTTCCGTTCACTTTTGTAA
GACGTTTTAGACATCTGAAATCGAACAGTTCTGGGTGTTGTCTTTAAATGTCTAAAACGT
CCTACAAAAGTAAACAGAGGGTGTAGTAGGCACTCTGATTTTATTATTATTACCGGCTCT
TGCTAATCCTGTCACTTGGCACGCACAATCTTATCCTTTTGTCCCTTTCGTCTGTCCCAT
ACCACCAACTACTGGAATGCAACGTTCACTTGCCTGTTTCAGTCTCTGCCCTTGTGCACA
ATTGCGGAAAGCCACGACGGACCTCTCACTCGTTTCCATCACTGGACTTTTCCTCGTCAC
AGTTGCTATATCTGTGCTCAGCAATGCTACATATACGGGAGTTTTACAGGCTGAGATGAG
GTGGAATGCATTGATTGGTGATTAAGATGAAGCGGACCCATCCCAAAAATCAGGGGGAAG
AGATTAGTGTAGAGAAAGACCAGTCCGTTAAATCTTGTAAAAAGTTTCCGTAAGTCTAGC
ATTTTTTATCTGTGCTGCCGGCTGACCATTGTGCGTTCAATCTCTGCCCATCCAAGTCCA
CTGCATGTGAGTGAGGCCTGTCGTTGCTTGGGTATGTACTCTATGGTCGTATTCCCTCTA
TCCCAAAATAATTGTCTTAACTTTATACTCTTTTCGTTTTTTTAGTCCACATATAAGATT
TGGTCAAAGTCAAACTTCGTAAACTTTGACTGAAATTATATAATAAAATATCAACATTCA
TAATATGAAATCAATATTAGTAGATGCATCATGATATTAATTTTCATAGCATATAGGTTT
AGTATTATAGATGTTGACAT