morexGenes - Barley RNA-seq Database

Contig contig_1567569

Source Contig contig_1567569

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1567569 (2639 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1567569

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14212	3	1636 bp	AK356366	Available	Available	None

CDS Structure of MLOC_14212

Contig Sequence (2639 bp)

>contig_1567569 2639 assembly3_WGSMorex_rbca.fasta
TAGGATTTATAAATGACGGGAAACATACCAAAAATAGAAGAGGAATAATGTTTATCCCAG
CTCCCTACTTTGTGGTACTAGTGCTTATCTTCTGAAGCAGCTTCGTAGTCGCAAAAAAAC
GGAAAAAAGGAAATAAGCAGATCCATGTTGATGCTTTTTGTTGGTATATTCTTGCATGTA
TTTGACACACTCCTTAGTCCTTAGGGAAAGCCAAGACTTGGAAACTGTATTTTCGATCGC
AATATTGTGCATTAAGAGGGATAGGTTTAGGGCAACGTGTGGACGCAGCACGCCGCTGCG
TCATAGAACCTTTGGTTTGGCTCCGCTCGTACGAGAATGGACGTAGCTGTAAGTTTTGGT
GCAATGCTACAATCCTGGGAAAATAGCAGATCCATGTTGATGCTTTTTTGTTAGTATATT
CATGCGTGTATTTGACACATCCTTAGAGAATNCCAAGACTTGGAAACTGTGCTCCGACCT
CTATATTGTGCAATAAGAGGGCTAAACTTAGAGCAACGTGTGGACGTAGCACGGCGCCGC
CTCATGGAACCTTGGTTTGGCTCCGCATTGTACGTGGCTATGAGTTTTGGTGCAATGCTA
TAATCCTGGGAAGATAGTTTCAACCTTCCTTTTCATTGCCTGATGTCCGTCTTTTAATTT
TCTGCGTGGTTGACTGGTTGTACATAAACTGTCATCAAGGTTTTTTGCACACCTTCAACT
TGTCTGCTATTTTCTGTACAGAAAATCTTGTTGATTAATAACTTGCTTTATCTTGTACAG
CACTTATGCCTGCCTATGGAGTCATCTAAAACTGATGCCGGTGATAAGCATTTGGAGAGC
TACCTGACACTGGGTTTGACAATACCACAGTCAAAGAAAGGGGATACCAACTTTCCAAAG
GTCCTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAGAATGAACAATTACTA
GGTTCTGATAGAATAAAGGAGACGACCACTATTTTTCATGGACAGAGGGTCCCAGATCTT
AGTATACAGCTCTATGCAGAGCGCATTTTCAAGTATGCCGAGTGCAGTCCATCTTGCTTC
GTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGCCAAATGTGTACATGACGCCC
TTTAGCGTTCACCGGTTGCTAATTACAAGTGTGGTGGTTGCTGCCAAATTCACAGATGAT
GGGTAAGTGTACCCAATGCAACTGCAATTCAATTGTGTTTCTCTGTGTACCACAAACATG
CACAGGTTTTCCAATAACTTTCTCGATGTATCTCCTGCAGGTTTTTCGACAATGCGTTCT
ACGCTAGGGTTGGAGGAATCAGCACAGTCGAGATGAATCGGCTTGAGCTGGATTTGTTGT
TTAATCTGGACTTCAGGCTGAAAGTGAACCTAGAGACATTTGGGAGCTACTGCTTGCAGC
TGGAGAAACACGCACCGGTGTCACCAGAGAGACTCCCGGTTCAGGTTCATTGTGTCAAGG
GATCTAAAGATTTGAGCTATAGCAACAGCAGCGCCGACGAGTTTTGCCAGAGCAAGCTAG
TGCGCCAGAGCTACAGCAGCCAGGCTCTCCAAGGATGTAGCTGACCAATCTATTTACGAC
CTGCAGTTTTGCAAAGATTACTGATTATTCGTTTAGATCTGACATTTGTGCATTCGGATT
GCATTAAATTGTTCTGAGGGTGTTTGATTAGTAGGGATTCGATTCTGTTTTACTTCTGTA
ACACTGTAATTCTTGCAAACCACTCTGTTTAAATTTGCACAATCGAGTTGGGAAACAACT
GGCCTGGACATTATTCAGTCCTGTGATATCCAATGCCGCGGTTTAACTGGATCCGTTGCC
AAGTAACCTCTTGGCAAGTTGTGTCTGGCTTTTCCAAGATCTGTGAATGGCATGTGTTCT
TTCTCTGTGCACCTTCTGATTCAGTTTAGTCGCATAACAGGATCGATGATGATTTTCACT
GGCATTGTTGGTACAAGGAATTTATAAAGCGAATTACTTTCCTGAACACGAGAAATGCTT
CTAGGAAGGGAAGAAATGCTCTTCTGTCTGAAGTTCAGCTTTAAATTTCTGTGTGTGTTA
TCTGGTCAGTCCTCAAACGTTATCCCTTAACTAGAGTAATTTTTCTTTGTCTTGCGGGGC
TTAATTAGAGTAGTTGATTATGCAACTATGCTAGGAAAGAGTCCGGTTATTTGTAGATCA
TGTTACCGACTTGAATGGACCTGTGTGTGTGTGTGTGTTATCTGGGCAGTTCGAATGGAC
TTACCATTTGTCGGTCAAGTTTTGTCTACTGCATACAGGCATCGACCTTCCCCCATAAAG
CAGAGAAGGATATGTATCATATATGTATGCAGTTTTAGACCTATTGTTCTGGGACATGAT
GGAACAATTTTATGCCCCAAGATCCGAACAACATGATGGAACAATAAAGCAGAGAAGATA
TGTATGCTGATTCGATTTCCTTCAGCAGTTCCTCGGTTGAGTTGTGCAACTGAGAGCATC
TCCAACAGCCGCGCTTTGCGTCGCGCGCAAAAAACTTGTTTGCCGCGCGCGTTTCGTTGG
TTTAGCGCGGCCGCCAGCGCTGGCTCCAACAGTCGCGCTAAAATGCAGCGCGCGCGCCG