Contig Data
morexGenes
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Map Locations of contig_1567519 (5738 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1567519

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14197 2 1404 bp MLOC_14197.1 Available Available LOC_Os12g08920.1, FRAME:-1, EVALUE:6e-174, 13112.m00947 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_14197






Contig Sequence (5738 bp)

>contig_1567519 5738 assembly3_WGSMorex_rbca.fasta
TGGCTTGGAGAAAATGCTTTGCTGGATCGATACACAACTCCTTCAGTTTTGAGCGCCCAT
CCCATCCATTGCGTATGCAACTGGATTTTCCTTTTATGTTTCGTTCAATCAACGTCACTC
TTTATTAGATTCTCATAAGATGGTCCTTCGCTATCTCGAACAAATAATACTACAAATTTA
TAGCTCAGCAATCGACTATCTTTCCACCTCGCAAGGCCTTATCTCCTCACACATCTATAA
TTGGCATCAAGCGATCTCCTGCCGTCAGATCTTCCCTCGCAGTGGTTCTTGCTCGGGCCA
ATCAAGGGTCGTCCTTTGCGACGTTACCCGACCTTCGCGATTTGTTGTGGGTTCTCTCAT
CGGTTGGATTCGGTGTTTTTTTGTGTGTCATGACTTCACATGCAATTGGGTTGTCTGGGC
ATGAAGAAAGTGATCTGACATAGATGATGAAGGGGCTAGGGATCTGCGATGAGGACCTTG
ATGATGAATTTTTCAAGAAAGAGGAACAATCGTCAACGAATGCTACATGGCAGCTGCCGA
TTGCAAGGGTTTATGTGGAGAAAAAATTATGAGTTTTAGTTTTGCAAGACATGCGTCGTG
CATGGGATTAGGTCATGATATTAAGTTTAGATCTTTGGATACAATTCGTTCCTATAAAAA
ACAATAAATGGCAAAGCCGAAACAAATTATGGATACATATACTATACTAATAAGATGATA
CGATTGCATGAAGATGATTGCAATGAACTCTCATGAGAGATAGACATCGGAATCAACTGT
CATGATAGATAAAACATACTCCCTCCTTTCAAAATAAGTGATCTAAAAATGACTCAACTT
TGCATTAACTTTAGTACAAAGTTGAGTCATTTTTGAGTCAGTCACTTATTTTGGGACGGA
GGGAGTATAATCTTACTAATCTTATCATCATCCATGCAATTAATCAACACACATAGAAAG
GAAAGCCTGATACAATCACTACTCCCTCCGTTCCTAAATNNNNNNNNNNNNNNNNNNNNN
NNTAGAAGTCTACATACGAAGCAAAATGAGTGAATCAATACTCTAAAGTATGTCTATATN
NNNNNNTATGTAGTCCACTAGTAAAATCTCTTTAAAGACTTATATTTAGAAACGGAGGGA
GTAGTATTTAAGATAACAGATTGCATGGTCAAATACGAAGAAAGAAAAAGGGCAAGGTAA
TAAGACACGAAGGAACACCGAACTAGTGCCCTCGGTCGACTTTCGTTTGTCGTATCTGTC
ATGCCTTGAATCCTGTAAGGCAATGCCCTAAATTCATTCGCTTCGTTTTACTGCACCTTC
TCCGAGGAGACTGCTATGACGAGAGCGGTGGAGCCAGCGCAGTGGGTCGTGGCAGATCTT
TGGATAATCAATAAGCTATACACCATGCAATTCGGGTGCTTTGGCAATGTGATGGAAGGA
GGGCCATGACATTACGTGGAAGGCCTATTACTCTTGCTTCGTATGACCGATTCATGGAGT
CGTCCTCAATCCTCCCGAATACTTTTAGTATTTAGATTGAAATTACGATTTGTCGCATGT
CTTCACCTCGGTGGTTAAATTGTGGGCGAGTATCTTGCACACGAGACACCATCAAATAAT
TTCCCACGAAGCTTTTTTCATGTTATAATTACAACTAATATCGGAAAGCCTCTGAAAAAT
GTTATGTCAATGTTTAAGGGTGTCGGGCGAGAGAGCTATTTTGTGAAGTATGAGTTGTTG
CTCAATTGGTGTGTTGTGTGTGGTATTATTGGTGGTCTAAACACTAAACACGAAAACATC
GGCTATCCCCCTTTAACCCTCATGTTTAAGGATTTTTGTGCATCCAATAGCATGCGTCGG
GAGGTCGAAGGGGCCGGGGTTGTAGCTCAAGTCGTGGTCCGGGTAGTGGCTCAAGAGGTA
ATAAGTTCTACGATACTTTCTCGGATCAGAGTGATGACGATGACCGGAGATATGCTAATG
ATGATGAGTTACATAAGAATCGAAATGGGCATCATGATTAGGAGGATGACCTTCACAAGG
ATGAATTGTTGTACCGGCTAGAGATGATAAAGCAATGAAAACTAGTCCTTGTTATGGCGG
GGGTAAGGACTCGCATGGGAATACTTCTGCTACTATGGTTGATGAGACATATCCTGATAT
GATGGACGTTGAACAGAGGAGGAAGAAATAATTGTTAATTGTGCCACCATGAGAGGGCTC
CTCGCCTACGGTTGGGAATTTGAGTCAACTGTAAGTTCTCCTTCAAAGAGGGATCCAAAG
GGATGTGAGAATGATGATAAAAGTAATGGTAATGCAGGTTCAGCAAACCTAAAATCGGCG
AGGAAAAAAATTGTTAGTTCCACCACCATGGGAAAACCAAAATGTCACATAAGGGATGGT
ACTCTATTTGAGGTGCACTACACAGAAAGTTCAACCAAATTCGCACGACGACTGCAACTT
GAGTTATGTCTTCGTGTTTATTTTTGAAGCAATTGCACTTACTTAAAAAAAAATCATATA
TTAAGTTGCTATGTACTCCCTCCGTTTTAGTTTATAAGTCCGGCACGTGTATCTAGGTCG
TCAATTTAACCAACTTAATGAGAGACATATATTATAAAAATTATATCATTAAAAAGTTTA
GATGTTTTATTTTTTAATGATATAATTTTTATGTTAAATAATATATTTTATATAAGTCAA
ATTAATGATCTAGGTACACGTGCATGTCTTATAAACTGTGATAGAGGGAGCATTATGCAT
TGCACCCTCTTATTCAATATTTTTGTGTGTAACAATTTTGAAAAAGTTGCCACTTTTCCC
GTCTCATTGATTCGTTGACGTAAATATCTTCTCTCTCAGGGCCTGCTTGGAATCGGTGTA
TACTTATACACTCGGATTTAATTTACACATGTATATTACCGGCCATATATAGTGTAAATT
ACGCCTGAAATAGAAACGATGACTCGACATCTGTATCAATTACACCGGTATTTAGAACTC
ATCCGACAATCCAAGCGAGCCCTCAACCTCAAATGGGTGAAGTGGAAGGTCGGTTATTGG
AATCCTTAGAATGAAAAATTTACTCGCTCGGGTAGAAATCGCATCAACGTCAACGCCATC
GATCATTTTGTTAGAAATCTAAGATAATTCCGTGGTTCATGTGTTTGGTGTGTATGTTAT
CTGTAAACATGTGGATTTTTCTTTTAATATAAAATGCAATGCTTTTATGTGATGAATGCG
GATGTGCTAGTACTGCGACGGTGATTAACTGAAGGCAGATAAGTCAGTAGTAACGATACA
CTCACTCACCGCCACTCGGTACACTTTCCCCTGTTCCTGTTATCCGTATGTAGTACTGTG
CAATGCGAGTAACACAGTAGTAGGTTTCTTGATACAGTTGGAGTACACAGTGCAATCACA
TGAATGGCGCCATATTTTCCTTGAGAACATTAAATCGGCACCGAATATAGACAGCTCAAA
CCAACACGTTAGTACTGAATCCAGAGTACGTGCTCCCCATTCTCATCTTTTCTGCGAGTT
TTGTTTTCTTTGCATTGCACATTAATTAATTTCTGCATGTTCTTGCACTAGAAATCAAAC
AAGTTGTTAACAACTCATCCGTCAATCCGGTGAATATGAAATCTTAATCCGACCACCATT
CTCGACTGTCAATATTCGAGCATGCACTGAAGAAATCATGTTCATTTTCTCTGAATGAAT
TCATGTTTCCGGGAGAGATTTACAGTAATTTGAATGCTATTGTTCGTAGTATGATTTATA
GCAATGGCTTGTCGATCGATCAGTTCGTGTTGAACGCCGAGCACACGTCCCTGATCTCCC
CGGCGTCGCCGGTGATGGCGCCGATGGTGCCCATCTTGATCATGGCGCCGACGAAATCCT
GCGCGAAGCTGGCGGACGCCGCGCCGAGGTAGGCGCCGACGAGCGCGCCGGTGGCGTTGT
TGGCCTCGAGCGCCGCGTCGGAGGCGATGGCGACGAGGCCTGAGCGGATGTTGCGGAGGA
TGGAGTCGTCGAATCTGCCCTGGCTGCCGCGGTCCAGTGGCACGCGCGTGTTGAAGTCGC
CGGGCGCGCACCGGGCCTTGAGCTCCGACAGGAACGCCGCCGGGATCGACGGGTCCGACC
CCGTGCGGCCGCCCGGCAGCGGAAAGCTGTAGAGCCGATCCTTGACGAAGAAGCACGCCG
TCGTGCCGATCGTGTGCGCCGCTGCATGCGCATGTTGCGGCGGAGGGACGCCGTCGCGTG
TCAGCGTGTGACGTGCGTGCACGCGCGCGCGTACGTACGGTACTATGTGGTCGATGTGGG
GTACGTACCTGTGAGGAGAACGAGGTCGCGGTCGTTGAGGCCGCTGGCGGCGAACTTGGA
GCGGAGCACCTGGATGGAGTCGCTCACGTCCGGCAGCACGTCGGCGTCGCGGACGTTGGA
CGACAGCCCGTCGCGCCGCCCCGTCGGCACCTCGAACGACGGCCCGTTTGTCTGCCATGG
CGCGCGTCAGACAAAGACAAGCAGCATCCCGATCGTCAGTGGCACCGCGCGCCCGTCACG
AGCCCCCGACAAGATCGACTAGAAACAAACACGGCGTGCATGGGGCAGGATTGCAGGAAC
GCCTCGTGCTAACATGACGTACCATGGCTATGGCGTCGCGTGCGGCGAGAGCGACGATGT
CGGCGCAGGAGACGACCCCGGGGCACTGCTCCTCGAGCTCCGCCTTGGCGGCGTCGACCA
CGTCCAGGCCGCGGAGGCCCTGGTGCTTGTTGTTGTTCACCTCGGCGCCGTTGCCCGTGA
TCAGCACCGACGCGTCGCATCCCTGCAGCAGCCACGCGCGCACTTGAATAACTCGCTCAC
TGTCACTGCTAGCTACCCTGACATCGACACGGCTAACTACATCGGCCATTCAGCCAAGCC
ATTTCTGCTCACTCTGACGAAGCAGTCGTGGAACTGGAGGCGGACGAGGGCGGGGAGGAT
GGTGGCGTCCGAGGCGGCGGCTTCCTGGACGGCGGTGGTGACCATGTCCTCGGCGCCGGG
GCAGGAGTCGGAGTAGAACCCCATCTGGAGCTGACCGTGCGCGGCGCCGAAGAACAGCAA
GAACGCCACTGTTAGCGCTGCCGGCGCGGTTGTCAGAAGGACGCCGTCGGCCATTTCTGG
CAGACACCAGCAGCCAGCACGAGACTGCACGGGAAAATATTCTTGCGTCACTAACTCGAG
ATGGAGCAAGTGATGGGGAGTTGCATAAATCAGGGCTAATTTTATTTATAGAGCTTAATC
TGGGCACTGGCTGGCTGTCAGTATGGGGAGCTTGTCTTGAGCGCTGTGTGAGTGTGATGC
TCCACCAGGAATGCGTTTAAGTTGGCGGATGCAGACGATATTAAGGGCGTTCCGGATTGG
AGACGTCTCAGCCCCAACCGGAATGAAGCCCAAGGTTCCGGTAAGGATGCGGTGTTTTCT
AGCAGAGTCAATCACATCACCTATGATTAAACTTGACAAGAAAAATCAATTTAGTGCTAT
AACTTGCGGCATACGTTGAATTGGTGTGTTGAGTTAGAGCATGTTTGGTTCCCAGCCACA
CTTTGTCAAGCCAAAATTTGGCAGCCACAGTTTAGTTGACATATGTTTGGTTTTTGCCAC
ACTTTGTTGTCGCTATGGCTCATTTGTCATAGAGTCAATTTTTTTGTCAACTTTTGTCGA
AGTTTGGCGTTCGTTTTTTCAGCCACACTTTGTGGCTT