Map Locations of contig_1567505 (5613 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1567505

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14193 5 1623 bp MLOC_14193.2 Available Available LOC_Os07g41730.2, FRAME:-3, EVALUE:0.0, 13107.m10030 protein OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed





CDS Structure of MLOC_14193






Contig Sequence (5613 bp)

>contig_1567505 5613 assembly3_WGSMorex_rbca.fasta
CAAATATTTACGAAAAATAATCACGAAAATGAAAAATAACCACGAAAAATAATAATCATG
AGAACGAGAAAAAATAACCACAAAAAAATAACCACGAAAACTTTTGTTCAGATGCGGGGT
GAGCGCGGTGAGAATTGCTTGGTTATTTCTTTTTTTTCTTTGCTTTCTCACACGAATAAC
GAGTCGATTCCTCCAAATCAGTGGAATCAGTTGGTGACGCATCTGGAAGGAATATTCCCT
GCATGCGGATGACCCAATTCCGATTCCTAACCCAACTAAACACGAGAACGGCTGCTAGGG
ATGGAACCAACCCGTCCGATTCCACCTCATCCTGAAACCAAACACATCCTTAGTCATACA
CGGGCAAGGTGACCTGAAACCAAACACATCCTTAGTCATACACGGGCAAGGTGACGCAGA
TTCAGTTCCGATTGACACGAACTACAAAACAGTTTTGTTGAAGGAACAACCATTGCTACT
TATTTAATCAAATGGGACAGGTTATTCATCATCTCCAGGCCTCTTTGCTCTGCACGTCTC
TTGCACACGGGCAATACATAAAATATTCTTGAAGGACTGCAATCCTCCGAAATTTTCATT
TGATAATAATCCTTTAAACCAAAGAAGCCCTGGGTGGAAGCATTTTCAGAAACAAAGATA
TTGAAAGCTGCAGGTTTTTGCACAGCAGGCGCAAAAAAACAAGATACCATGTTGGTAGCA
ACAGTCATAATAACAGAACCAAATGGCTGAGCCAACAAGATTACCCTATACTGAACCGTC
ATACACCAAGGCTAGATTTGCTAACATACGGTACTACTAGTTCCAATAAATTGCAAATAC
TTGAATGAAGCCAATTCAACATTGTACAGAAACTCGGGAGTTGAAGGCCATGCTAGGCTC
AGAAATATATATATGTCACTCCATACACAAATGCAGCAGCATCATAGGATGGAGAACAAC
CTCAAAATATATTCACAGCTTTGGCTTCTTCAGGTGGAATGGAGCAGAACAATCACCTGA
ATTAATTGTTTGAAATGATCTTCAATCCATCAAAGACCGGAATTGCATCAACATCAGAAA
AACTGGTGGAAAACAGCAGGCTGCTCTAAATATCCCAATTATTATGCAGCTTTATCTAGA
AAGAGAGATTTAATTTATCAGAGGCAAGCTAACATACATCGCACATTTGTAGTCAACATC
ATGAACCAGGTTCCAAAATTTGAAGATACAAATGATTGTATTCACTATTCAGTATTGCCA
TTAATAACACTAGTAAAACTACACTATGTAGTTAAATACACAAATATGACAGCATAATGT
GTCCCTACACATATAAGTAAAAACATGATAGAACAATATTCCCAGGAAAATGTTAAAATG
AATTGGTAAATACTAATTACCATCATCAGCAATTTCACTTGTGCAGCTGACATCAGAACT
CTCTACTTCTGGGGCATATTGGTCCAGAAACAATTCAATTGTCCTCCAGTAGCGGTCCCC
TCCAGAAATCCAGGTATCCATATGCATACCACTGGGAAAATCAACAAACCTACAATTCCT
GTTATGTTCAACAGCTTTGTCATACAGCATCCTCATGTGTGAAGGGGGAACCAGTTCATC
TTGCAATCCAGAAAGGAAGAGAATGGGTTGTTTGACCTGCATTGACATGCAAAAATTAGG
CAACGGATAACACACAGCATTGGGCTAAAATAAAGATCTGAGAACTGCAGAATGGCATAA
ATACAGAATTGAAACCTTACGGCTTAACAGATTATGATTATTTCTGAAGATGGGACGGAC
TAAAATAAAGATTTGAGAACAGCAGAATAGCATAAATACAGATTTGGAATCTTACAGCTT
AACAATAATATAGGTTCATTTTTTTGGTGTAATCTTCGAATACAAAGTCCAAAAGAATAA
AAGCAAACTATTTGAATCACAAGCAGATCAACACTATAATTTTTTCCAGAAGATCAAAAA
TAAGAATACGGAAGTTGTAACCAAGCATGAAAACAACATCGTATAAAATGTTAATTTAAA
CCAACCCCCAAAACTCACCTCTGCAACAACATCAAGTGTACTCCATGGAGAGCGAACAAC
ACAGTTAAGAAGTTTTGGGCCTTTGGCAGAACTGCCGCCTATGAACCATCTTAAGAAGGG
CAGCATGATACCAGCCATATCCAATATAGATGTAAAAGTATTTTCCAATATTAGAGCAGA
CACCTGCAACATAGAACAATATCTAGCAAGATCATTGTCAATTGCAAAGGCCAAAGCTTA
TAGCACCTCTATAGATGTTATTAGCTTACTAAAATATGACCTAAATCATGTTGCCTAACC
ACATGACTGAGTTCACAGCCGTAAAATCTAAAGAGCCTGCTTTATTAAGATGTCCCATGT
TGATCACAAAAGTAAAGTGTTGGTTGGACATAATTTCCTTTAATGGGTGACCGAGATCTG
GGGACTGTTTTTGGGTATTTAAGTTATTGAGTTCTGGCCAATCAAGATGGAAGGGGAAAG
AAAGATCTGGGTCTGTTGTTTTTTTTCTCTCTTTTCAAGTAAAACTTCTCTCCTATATGC
TGCCTCACATCATTTGATTTTCAGCATAGTAATCAAGACTGTAACCACCTATCTGCTGTC
AACAATGGGCATGATCATATGTCATCACTTGATTTTCAGCATATTGTAACAGTCTTAACA
TTCTTCACAATCTTCTGGCAAGATCTCTAGCAGAATAATCTCATAGAAGGTAGTCTACAT
CTTAACTACATGAAAATCTAAGTCTAGTTTATGAACATATGCATGTTTTGAATGTTGATC
CAACGAAATTTGTTCAATAATAGAAGCGCAGTGGAGGATACTGCCATCACAAATCCAATA
GCAGAGAGATCAAATGAACCTATTCTCACTTCTCTACAACAATATGCATAGACAAATCAG
TTTACAATGAGTACCTTGTCAGGATTGTTCTTTGCAAGAACTGATCCAACAGCACCTCCT
AAAGATCTCCCAAAGATAACTATCCTGGATGTGTCAATGTCCTTCCTCTGAAGTAGATGA
TCAAGCGCAGCCTATCAAAAGAAGAGCTGTAAGAAGAGTAAACAGAACCCCAAAAGTGAG
AACAAAACAAAAAATCAAGAAACAACAAACCTGTGCATCTTTTGTGATGCCACTCTGAGA
AGGATAACCTTCACTCTCACCATACCTACAGACATGATCAAAGTTCAGGTCACTAATAAA
TGGAAGAAATTGAAGACATTTGTATCACATACTGAGAGATTCAAGAAAAAAAAGAATGAA
ACAAAGATAATAGAAATGGTTTATACTGTGGAGAACCATACCCTCTATAAGAAAGCATAA
ACACATTGCACTGTAGCCGCTGCATCATTAGTCGAACGCATTCCAAACGATGTGCAATAT
CTATAACATGTGAAGGATTTTAACAAAGTATAGCTTCAGCACAATCTTTGCCATCAATTA
GATATAATTTTATGAGATTAATTTTCATGTCCATAAAAAGAAATTCAGGATACTGCCGGC
ATTTTCCTGGAAGAACAGAATGGTTGGACCTGCATCAGGAAAACACTATGAAACAAACGA
CAATGTGGGAACAAAACAAATGTAGAGTTGAGAACAAACTGAAGATTGAGTACAATAGTT
ACTAAGCATACATACACTATATCAATTTCATGCTATCAGTGATGTAGGAAATGGGAGAGG
ACTGAAGCTCTGAAGATGACTCTTTTTGTGAAATACTCTCTTAAAACTCTTGTTTTCATA
TAATTATCAAGCATCACAAACACCTAGTTATAGAACAATATCTAATAAATAAATACACCA
GCAAATGATGTGGCCAATGAGATATAGACAAGAAGAAGTGTATCTCATTTGATGCGTTGA
CAAGATCAGCTGTAGTAGATACCACTAGCTAGAGGAAACTAGCACATGAATGCAAATTCT
AGTTTTGCAGATAGTTGGCCAGCTGGTCCAGTTACGCATTTGGGGCCAACGACTAAAAGG
CGAAGGTGATTAGGAGAAAGTAGGTTCAGCGCAGCGCCAAGCCGCTTTTCAAGGGAAGAG
ACAAATGTGTTTGACATGCCAAAGTATTTTGAACGTACACGTGGCAATTGCATATTTCTC
GTCCACAGATCTACGCCAATATTTCCCATCTCTTCCTGCTTTGAACCAAATCATGGTTCA
CATGAACTTATATATAGTCATGCATGCCTTTATATATGGTCAGAAAGCTTATTGGGTATA
CTTTCTAAACTTGCACAACTTTCAAAACTAACCCGTAGAAATAAACGGTAGAAAACTAAA
TCAACAACCATGGAACGTAGTGATGCAATGCAAATATATAACCACGTAAAGACAAGAAAG
AAACACATCACGATAAAAAACTAAGTATGAATAAAATATGGAACCTAACCCTACCATATG
TTCATAACATCTCCACAGTCTATTGAACACCAATAGCACATCAGAGAAATACACTATACT
GAGTACCACATACACCAGCGAGTACTGACTAGAAAATCACAATGAAGCTGGAACTTGATA
ACTCAATTCCAATTGAAACTCATTGTGAGATCGGCCAATCAATCCTGAATCCATACACCA
AACTACAGAGAACTGTGTAATTAAAGCAAGGAACCCTATAGATCGATTAAGAACATACGA
CATACCCACGCAGGCAGCCGCAGTAAAGTACAAACCCTACAGCCACAAAAATCATAAATA
TTGGGGCATATCCTACGTGAACGCCGTAAATGCTACCCAGATCCACGGACCCATGTCCCG
ATCAAGGGAGCTAAGAGATGAAGCGAAGCCATTATCTAGCCACACAATTCGGGTCAAAAT
CAATCTCTCGAGTATAGCCTCGAAGAGATCCACAACCTGACGCTCCAATAACCCGAACAC
TTCCTGATACCGATGGGATATTCGACACGGGGGGAGGAACCAACAGACAAACCAGGAGAG
GTTGGGGAGGATCGGGGACTGGGTGGTACTTGCCTCGGCAGGTGGGAGAATGGCGGAGGA
ACCAGGAGTGGAGGCGCACGCCGTCGGCGGCGCGGAGCCAGACGTCCTCATAGATGAGTC
GGAGGCGCGTGGGCGTGATGGGGTAGGCTCGCGGGAGACCAGGGAGCACGGGCACGTAGA
CGAGGCGCTCCTGCAGCGCCACCAGCGCCGCCAGACCCACCACCGCCATGCCCCCCGCGC
CGTACACCAGCGCCTTGAGCCACCCCACCATCTCCGCCGCCGATGGGAAGGAAGGGCTCC
GTCAGGCGGGTGGTGGTGGTGATGTGCGCGGTCGCCGCTGCTCTTTGACTCGCGTCGTCG
GTCGGGGCCGGATTTGGGTTTTAGTCGGACGGGACGGGGCCTGCTTCGAGCCAGAGCTCA
AGTGCGTCTAGGCCTGTAGGGACGGAAAAATTAACTGACCTGTGTAAGAACTCACGAAGT
GAACCCAAACGCAAAAAAATTCATCCGTCTGACCCTTTCGTGTGGCGTCCGAAACCTAAG
CGTCATACTATACTGTGTGACGTCTAAGTCGTCGGCGCCACACGCACCGACCACCTGGCA
GGGAGGGCCCACCTCCAGGCAGTGCGACGCCTA