Contig Data
morexGenes
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Map Locations of contig_1567463 (5510 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1567463

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14183 2 1208 bp AK358313 Available Available None
MLOC_14182 1 864 bp MLOC_14182.1 Available Available None





CDS Structure of MLOC_14183






CDS Structure of MLOC_14182






Contig Sequence (5510 bp)

>contig_1567463 5510 assembly3_WGSMorex_rbca.fasta
ACTCATCAGGTCCAACGGGGGACACATTCAACGCGGCCCCACTCGTCAGAATTAACAGTC
AAAGCACTGACCCGACGACATCCACCGTTTGTGACCAGTTCTGAGGGTTTCAGCCAAAGG
AGTAGGAAAAAGTAAGCAAAAGTTAAGAGCGTGAGGATGAATGAGTAGAGCTAACGAACC
ATGGGCACAGAAATAAAAATCTCTATTATAAATTGCATCTATTCATATGCAAGCACTTGC
CAAAAATTATCCTACGAATAAACAAACATACGAACTAGGGGCATACAAATAAAAATCTGT
ATTATAAATTGCATCTATTCATATGCAAGCACTTGTTAAAATTTATCCTAGGAATTTTTT
TGCGGTACCGCGAGCAAGCGAGACGGATTTATGGGATCTATTTCGTCGAATGGCTCTTGG
TATCACAAAATACTTTTAATGGAGCGAGTAAACGATTTTTGCGGGGTGAGTTTTTATCAG
ATTCGTTAGAGTTGCTCTTACAACTCAAAATAGTTGAGGAGTACCAAAGAAATGTTGGGA
CCACATGAGTTACACTAGGCCTTAATATACCAACACTATACAAGTACAGTATTAAAACGC
AATAGCATGTGGTTGAGATAAGAAAACATGGCACGCAATCACGTCTGCGTATATATATGA
ACATAAAGTTCCATCTCCAACAAAGCTGGCGATAACTAAGAGCTTCCGAATTCCCACCAA
TACCGCGTTTGGTATGAATGAATCCGATACGAATAAACAAACATACGAAGAAACAAAAAA
CGTGTATCCGTGTCATCAACTCCACGCCCAAAAAGTAAAAAAGCGCCGCCAACAGCTCCG
TCCCCTTTCCGCGCCCACACTGGTGGCGCACGAAGCGCCTACGTGGCCCGATCGAGGTCG
TCGGCTCAGCCTGGCCCAACCACCGCCGGTGGTTTCCCTCCGTCCGCGTCCTCTGAGATC
ACCTCACCTCGCTGACTCAGATCCTCCTCTGGAGTCAAATCCTCATCAGCCTCGACGCAT
CACCGGCGATTCGCTAGCTAATTATTTCCGTCCAGAAAAACAACGCGGCCCGCTCCCAAT
GATCACTCCGTCCCGTTGTTGCCGTGTAGCTGTGCACGCACTGTGCTACATGTCGTCGTC
GATCGGCTACCTTTGTCCACGACACTACTATATAGCTGTCGCTGAGCTCTCGAGTCGAGG
CTTGTTCCCATTCTTCTTCCACATCGCTACGGCTACGAGATCCATCTGCTCCGTTTCTTG
GGTTGCTCCGTGCTTCGGCCGGTGCTTGGCTACGCGTCCCGTTGCCTGCCCTTGTTGACC
GGGCCGGAGAGCTCGGAGGCTTCACGAGGGGAGTAGCTAGCTGGAGTTTGGAAGCGATCA
ATGGCGATCTGCGCGGGCTTCGATTCCTACCGGGCGTCGCCGGCGGACATGCGGGTCGTG
ACGTCGGACGGGCAGAGCATGGCCGCGCACTCCTACGTTCTTGTAAGCCACTCTGCCGCT
TATTCGATTTACGCGGCGGATCTTGTCTTGTGCCTTGCTGTTGAATCTTGGCTAATTCGA
AATCGGGTGGCGATATGCAGGCCTCGGCGTCGCCGGTGCTGGAGCGGATGATCGACAGGG
CGCAGGGCGGGTGGGGCGCCGAGTGCACCATCCGCGTCCTCGGCGTGTCCTACGACGCCG
TCCACGCCTTCATCCACTTCCTCTACTCCCCCAAGTGCAAGGTGGTGCCCGCGGAGGAGG
AGGCGGTGGGCGCGAACTGGGCGCAGGTGCTGGCGCTGGCGCACGCGTACCGGGTGGGGT
GGCTGAAGCGGGCGGCGGAGGCGGCCGTGTCGGCGCGCCTCACGCCGGAGCGCGCCGTGG
ACATGCTGAAGCTGGCGAGGCTCTGCGACGCGCCGCGGCTGTACACGTGGTGCGCGCGCC
TCGCGGCCGAGGAGTTCGCCGCCGTGGAGCAGTCCGACGGGTGGCGCTTCGCGCGGCGCC
ACGACGCGGCGCTCGAGCTGGAGCTCCTCGCGCTCCTGGAGGACGCGGACCAGCGGAGGG
GGCGGTGGGCGCGCGAGCGGGCCGCGCAGGAGGCGTGCCGGCAGCTCGGCGAGGCCATGG
CGTCCCTCGACCACATCTTCCCCGGCGCCAAGGGCGCCTGCGCTGACGCGGACGCGCCGT
GCGCGAGGGCGGGGTGCACGTGCCGGGGCCTGCGGCTGCTGATGCAGCACTTCGCGACGT
GCGCGAGGAAGATGGCGCCCGGCGGGTGCGCGCGGTGCAAGCGCATGCTGCAGCTGTTCC
GGCTGCACGCCTCCGTCTGCGTCCGGCCGGACCGGGCCTGCCGTGTGCCGCTCTGCAGGT
GAGAGAGAGAGAGAAAAAATATGAAACGTGGCGCTTTTTGCAAACGTACGGTAGATCATC
GGCAACCAAGAGCCAGGCTGGCGAGATCGGCGCCCGGCGCGCTTTCCGCGAAAGGAAATC
GATTTATACTCCTCTAGAATGAAATTGGACGTAGTAGTAGGAGTACTAGCTTTCGTCCTT
TTGCATGAAAGCGACATGGACGGCCACGGCAACGCCGCCAAAAGAGCGCCATGCAGACGC
ACATGACGGATCTGACGCAACGCATGCTTGATAGTACTCGTAGCTGTGTTTTTTACGTGT
GGTGACGAGGTGAGATCTAACGTTTTTATCGTGGTTGGCTGGTTTGTGCAGCCATTTCAA
GGCCAAGGCGCAGACGGGGAAGGCGGACAAGACGTGGAGGCTTCTGGTGAAGAAGGTGAC
GAGGGCCAAGGCGATGTCCTCCTTGGCCGAGAGGAAGGTGGTGCCGGCGGTCGTGGCCGA
GTCGTGGGCGAGGTACAACCGTAGGGCGGCCAAGTTGAGATGAGAGGAGTCATTTCTCTT
GTCTTTGTGGTCGTGTGGCTTAACCCTCGTCGTAGCAACGAGGTGTGGTGAGCTCAAAGT
TGGTTGTATCTAGTGTCATCTACTAGTTGTAGCTACTGATGGTTTGCTTAGCACATGTCA
CTTATTACTCGCGATGGTTATACTAGTACTAGAAGTTTAGCTGCTCTGTTGCCGGTCGCA
TGAGCCACGGTTCCATGCGTCGGAACAGGCCCCGTGCGATCCACCGACAGCCCCGACCCC
ACGGTGCAGTGAGCCGGTGAGGGAGGCCAGCGATTCTTCGGCTCACCCAACAGGCAAGTC
ACCACACATAGTAATATAGCAGGGAGCGATTTTTCGAAAATGATAATATACTAGCAGGGA
GGAGCGAACTTAATCTAACGTGACTCCTACTCGCTGTTACTCTTTGTCTCGTCCATGCTC
TTCCGGGTCTTGGTCTAGGACTAGCTGCTGGTTCTGCTGTAACCGTGAGCGCCATTGCCT
CAGCTTGTATAAGGGTTGGCAGTGGCAGATCTAACGAGACCTCCCGTTGTGAAGAGGAGA
GGGAGCCAACTGAAGTCCCACAACACACATGCCATGCCAGAGACACAGTCGACGCCAACT
CCAGCATCCGTGTCCGTTTCTCGCGAATCACCGTATGCGGATCCGCCGAGTTGCGTGCCT
TCATTCACATGCAAAGCTTAATTTCATCTCCTCACGCTGCGCTAGAGAAAGAAATGTGTT
TGGTGTTGACGTCTATGGAAAGAACAGCATATACGTACGTGTACGGTGAACATACATCGA
ACAAGGCCGCACGTCGTCTACCCTACACACAGGAGAAAACAACAAATTGGTTACCTCGGC
GCGCGCGCGCGAGAGAGAGAGCGAGATGCGTTCACCAGCATGACGAAGAAGTGTGGTCAC
CGCCATTTCGTCGCGACATGTTCACCTCGGCATCACGACGGTGAACGGTCCCTCCAACCC
AATGCACACGAGAAATACAAGAGCGCGCAGACAGATACAGATAGCCAGCGACAAGGACAT
GGCCTCAGCTTCAGAAATACGGAGTATCATCAACACAAGAAGGGACCATCGCCATGCCAT
CGATAGTACCATGATACTGTACCACCCCGTCCTCTTCATCACTGCGCCAAAATCCGAGCA
CTCCAACAGCGACGCGCCCAACGTCTGGGGATAGTCGTGCTAAGCCGTCGATTTCAACGT
CGACGCGCACTCCCCGGTTGGGTCGGTCGATCAGGTGGCGACCGGTGCAGGTTGGCGCGC
GGCTCTGTTAACATGGCGTGCCCGTCTCGATCCGGCTATCGATCCGGCTACGGAAGCAAA
GCACGTACGGGTCGCCGTAAGAGGACGACGTCTTGTTTTCGGTCGCCGTCTGGGTGCTGG
CTGGGGCCGGCGGCGTGCAGCGGTTGGCAACGGCAGGCCTATTGTCCGCCGTTGGTACTA
ACATGACGCTGACGCACCCCTGGCTTGATTCGCTCGCCGTGATTTCGTGACGCCACGCTG
AGGCTGATGTCCTACCTGGTCTGTCGACCTATTCCAATCACGCGATGGGCCATCAGGACT
GTCATCTTGTGCCACACTTGCAGCTGATGCCCACTTCTCCGTTGCAATTGGCAAAGTGAA
ATGTTTCGCAAAAGAAAAGAAGACAAAGTGAAATGGAATTGAATTTTCCTTACAAAACTG
TAAGAGTGGTGCTACGAGCTAGCTGCTGGCCTTGCAAATTTCATGACGGATCGAAACGAG
TTCGAATTTGGGGATGGATAGAGGAATTCCTTCCAGCCACCCGCACCTCTATCCTCTCCC
GTGTCCAAGCTCCGGCCTTAGCCGTTCAAATCCTCGACATCTATTACACAGATAGCTCTA
GTCTATATATAACACTACACCCTTAACGGGTTCAGTTTGGGTTTGCAAGCCACCGGGGAA
GATTCTCGGGCCTCATGAACCTGGGCCTCATCTGCACTTCTTCTCCCGCCTCCGCCTTGC
CTACATTAGCTTTAGTGTCTTCAGTAGCAGCAGCGCTGCGCCCGCTCCCTTCAGGTACAA
TATCGTCGGGAGTGCTGACATACCCCCTCCGATGAGAAACGGCTTGATCCCAAGTCGTGG
CACCGGGAAACTTGTGGCGAAGTGATTCCACGTCCTCCCAAGTTGCATCGTCTGAAGACG
ACCCGCTCCATTGAATCATTCCCTGAGCCACAGTGTGTTTGCCATGTTGACGCACCCGCT
GTTGTAGAATGCGGATAGGTACCTGAAGATGGGCATCGAATGAAGGCAGATCAGTCTGGA
CAAGATATCATCCATCCACACACGTTGGTCTTTGGAGATATGAAAAATTTGATCATAGTG
TGGTCTTCTAGAAAGAGCATCATTAGCAGAATTTTCCACTCGTTTTTTATACAGAGTAGT
GTAGTTTAACCCCATGAGCTTGGTGAGAGCTTTTTGTTGCCACACAGTGTGCAACTTCGG
ATCTTGCAAATGAACCAAACATTTCTGATCAGTTCTGATTGTAAATTGTTGGAAAAACAA
AAAGGCCTCCGTTGATCAACAACCTATAAAATAGCCAAGTATTCCTTTTCATATACTGAC
AAGGTCATTGTAACGACCAAGATGTGGTCCTTTCCGATCTGGGGGTCGAG