Contig Data
morexGenes
Links



Map Locations of contig_1567434 (4837 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1567434

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14174 4 1141 bp AK372804 Available Available None





CDS Structure of MLOC_14174






Contig Sequence (4837 bp)

>contig_1567434 4837 assembly3_WGSMorex_rbca.fasta
TTTACTTTCCTTGCACCTCAAGTCATGTGTAATANNNNNATGCCCCTTGGGCCTTCAATA
TAGACAAGTTGCTTTCCTAACAGTATGATGGTACATGTTGCAATATGCCAGTAGAGTTCT
AAAGTTGTACTAAAGCTGCAACAGTGAATATGATCGGAGGGAGTAACATTGTTTGCAAGT
AGACACTAGCAAGGGAACACTGCATAGGTTGGAGCCAGTTTGGAGATTACCATTTTCTAT
TACTCACCCAAAGCATAAAGAAAAACTTCCACTTCTGAGGAACTAATTTATGTCTACTCT
GGGTAAATAAGCATGCATGGGAAATCAGAATGTTAGAAGCCATTTTAAATGGTGAGCTCT
CTTAAACAGTTCAGATTTGTCTGCCTTGCCTAGGATTTTCCGAATAATGGTGAATTTATA
CTGATAGTATCACTGTTTAACCATTTATATTATATTTCTATCCCATGCTGTACGTAAAAA
AAGGAATAATAATGCTCATTGCATCAAGATATGTTTAACGTTAAGAATGGTAGACTAAAG
TGACAAATTGTAGAGTACGTAACAGATGACCAAGCCACAGTTTCATGCTCACAGAGAGGG
CAAAATGCACTTCTATAATAAATCAACTGATTGAACAAAAAATAATGTGGTTTAAGGAAC
TAATACTGAATGCCTAAAATACCTTACTCGACTTTGCATGTGAAACCACCAACTGAGCTG
GATCCTTTATAGCTGGAAATGTACACTCAATGTTTCCATCTCTGCTCTGAATGTAAAGAA
TATACATCAGTTCAAACATCAACCCAAACATTTATAACTGCCAAATTCCATGATCATCAT
TGCTCACTTTATCATACACATACAAATTTCCATCAGAGTGGCTAACAACAAAGATGCCTT
CACACTCTGGAACCCATGCAATAGAAGTGCAACGGCTGCAAACAATAGTACTGGGAAGTC
AACAGGAGAGTTAACTAAAATTATAAGAGGGGATAAGCATCCGTATGAACCAATATGCGA
ATAGCACTCTTGCTTATATTGCAGCCATGCAGACTAAAGTCAGAAGCCCCCCATGGCATC
CAACCCCATCAAAATAATATATTAAACCTCTGATTTCAAGAGAAATATCCATAGGAGTCA
GTACAAATTTTACTCCCCCTTATCTACTTCTACAAAACCATACGGATTCATAGGTGTGCA
AGTATATGCTATGGGACACCAGATGATGAACACACAAGGAAATCAGGTCGTTCTTTTGTC
TCCGCAATATGATGATTTAATAGAAGACAATACCTGACAGCATAGCCAATAAATATAAAA
ACAATTGCCTTACCATAGATTGGTGGAGTCAAATATTGCTCAACCTGATTGTTTCAATGT
CCCAAACAATGTCTATCGTGTTTTCAATTCTTTAAATGCTTCTGGAGTCCTTGTGAGGGA
AGATAATTTTGTTAACTCCTATTTTTTTTTCTCGTCTATCTAATACTTAAAAACTAAACT
GGGAAAAATGATGGGTTCTCGAGTAATACATCAGAGTGCTGTATTTGTATCTATGCATAC
ATGATGAAATCTTGTAGAGTATGTTAAATCGCAAGATAGTGAAATAAACAGGCAAACAAT
AACATTATTAATAGGCAACACTGATTTTCAGAAAATGCAAACAACCTCCAAATATCATAT
ATGACATGCACATGGATGCATGAATGAATAATGAAAATTAAAACATGCCTGCTGATGCTC
GCTCCATCTTTATCACCCTTATTATAATGTTGGGCTGCAACAGGCTTCCTTCCAGGTTCT
TGTAGCTGTTGCCTCAGTGACATTGAATAAACTGCATAATCGACACACCATAAAACACAT
TCCATTTTGAAGCGGAAAAACAAGCCAAGGAATACTGCACTAACCATCCCCTGATCCCAT
CCCAATGATCAAGTCATGCCCCTCCTTGGCCTCCGAGTCGAATGCGTGGCACAATGGGTT
AGAGTTGCTAAAATGGATGGACTTTAGCGGATCCTAGTGAAATTAATCAGCTGATCAGAA
CCAACAGTAGAACTGCATTTAGCATGCATCAAATAAAGGATTGCAGACCTTGTCCTGGGA
ATTCAGGTCACTAATGAATAGTGTATCCGCAGAATTGTAGATGATGTATGCACCCTTGCC
ATCGTAGTTTGCTACAGCTTGAGATCCTCCAAGGCTTGTAGATGTACCAAGGGTTCCTCC
CACACGGCTGCTTCCAGACACAGCACGACTGGCACCATTGCCCCCAACAAAGCTAAGTGC
CCGACTACCATTCCCGGTGCCTAGCAGCCTTGCTGCCGCCGATCGCATCCCACTGCTGGA
GCTTGGAGTTGATGGTGTGGAGCCTTGGCCAGTCGACCTCTCCTTCAGGTATGCCACCGT
CAACTGCCACAATCAATAAACAAACTTACCATATAAAATAAGAATCCAGAAGACCGGGAC
AGGACAACAGGCTAACCAGTTCGGCCAATCAAAGACTAAGCTGTTGCTACAAAATGACAG
AGATGAGAAGTAACAGCAACTATTAACTATAAAAAAGCATTCAAAAAATAATTGACTACA
AAAGTGAGAAGACAACCAGAATTATTCAATATCAGTACTGAAATAAATAGTTAGCAGCAA
CCTACACTAAAACTAAAGCTGGTCATAGTGGGGAGTAACTTTATACTAGTGTCTATGTTA
CTACATTCATAGTGCAAAGTATCATAGGAGTAGTATCATAGATGGCTTCATTTATTAACT
TGTAGACTAATTTTCTCTTGGGAAGCGGTATTTTACTATGCTACTACTCCATCACCATCT
CCTTCCTCGTTTAATACTATGTCATGTCACTAATATGCCTATTTGGCATTGCATGATTAT
GCATGTTACTACCTATGTTACTCCATAGTAACAGAGATCCCAACGTACCAAGGAAACGCT
CATGATAAGATCACTAGCTACAAGCCAACAGCACAAGAAACTGTGTAATGAAAATCTAAA
ACCAATCGAAATTTCATTTAAATACCACGCCGAAGCCACTCGAAATCTCAACAACTATGC
AAACCCACCGAAGCCACTCCACGACGAGACAACTCAATTCCCCATGCAGAATTCCAACCT
AGATCCCCATAGTTGGTGCCAGAACCGCAACGGAGTCCGCGGGTACCTGCGAGACGGTCT
TCCCGCCGTGGTTGTAGTGAAGGATAGTGGCGGAGTGCGCCTTCTCGTACTGCAGCTTGT
GCCTCCCCTCGGGCGTCTTGAAGTAGGTCTTCAGCCCGGCCGCCGTCGCCGCCGCGGCGC
CGCCGCCAGCCCCGGCCGCCGATGACGACGAAGAATACGATGTCGCCGCCATGCTCTCGC
ACCGCCACCGTCCACTAACTGCCCCTCGCGATCGCCTCCCGCTGCCCCGCAGTGCTTGCA
ACTCTCACGGGAGACGACAAGCGGTGGATTTGGGAGAAGAGACGAAGATGAAAGAAAAGA
GACGAACATATTAAAAAAAATAGAGAAAAGAAATAGCCTCCGTTCAGACCCGGCCCAGGC
CTGGCACGGTTAGTTACGGGCCGGCCATGCCATGCCGGCCCGCGTGCCTCCCTGTCAGGC
TCGGTACTACAGGTAAATGGACCGGCCCACGGGCATGTTTGGCCCGTGTGGCATGGTGGT
TTAAAGCCAGATCCACATATATTATGAAAGTTCATGAAAGTACAAACCACCTCAAACATA
ATAAAAATCATATCGACCAGCGCCCTCAAGCCACGGTCGTCATCGTTGAAACCTTGAATA
GATCTGAAGCAATTGACATCAAATCTTGTCGACGCGCATGCATGATGAGAAACATCCCCA
AGGAGACTAGGAATCTACATTAGAGTTGTGTCAACTACGTTCACATGGACGAACTCGAGG
AGGGTCAAAGTCTAAAATACAATCTTGGAAAAGAAGCGTTGCCATCCGCTTGAGCTTACA
TCACTTCTCCCTTATCCCGCAGGTCATATGCGCAACCAATGACACCATCCTCTCGAGCTC
TCAACACTTCTCCATTATCATGTAGGTCATACACGCAACCAATGACGCCATCCGCCCGAG
CTCCCGACACATCCCTTATCCCACGGGTCGTACACACAACTAACAACTTGGAGTTGTTGC
TCCTCGTGAGTTTCACCTCAACCTCCCCTTGTCACGCACTAATGGCCTACAAGTGCACAG
GGTATAATTGTAGCTTCTTCGAAATAAAAGTATCGATCCCACACGGAGCACATGAATCAG
TCTTTGTCTCTTAAGTGGTTTAAATGACAACGCCTACAAGTTAAATGCGATCCAAAGCAA
AATGGAAATGAATAAAATATAAGGTGATTGTACGAAAAGTGAATGTAAAGTGTGAAAAGT
AAAATAGAGCAACGCGAGACATGAGTAGTGAATGTTGGAACCAAAATGGCTAAACCATTC
CCAAGGAGTCTGGATTCCCCGCTGGTATGTGTCTACAAGACCAATGCCTAAGCATAATGC
TACGCCGGATTCGTAAGCCACTTTATATGTTTCTTTTTATGAGTGAAACCAAGTGCACAT
ATGTGCATACACGTTGTAGCCCTGTATCACATACGCCACTACCATTCGTCCCCACACCGC
TTAGTGAATGATAATTAAGGGTTTCCCCGTGGGCGCGGCTAAAAGTGATCTCTCTATACT
CCCCGTTGCAACGTTCATGGATGAAGGGAGATAGTCCTTATCACTAACCTACCTGTTAGA
GCATATTTCTCCGTATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATGATTGC
CTTAAGTTATATTCGAAGGATTTGTCCATAGACACTT