Contig Data
morexGenes
Links



Map Locations of contig_1567172 (4463 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1567172

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14062 3 1953 bp AK376921 Available Available None





CDS Structure of MLOC_14062






Contig Sequence (4463 bp)

>contig_1567172 4463 assembly3_WGSMorex_rbca.fasta
GTGGAGGAGGAAGGGGAGGGATGCGCGATGGATCCCGCGGCCCGCGTGCGTAGAGACGTT
TCCCTTTCCAAAATGGTTGTTGATTCAAATGGAAGTCACCGGTACCACCTAGACTTTATC
ATTTGGGGATATTTCCTGGTAACCTTGGGGCATTACTTCTATCGCTGCTATACTTTTTCC
CAAATGGTTGACACGAAGCTGTCTTGCAGGATTCTCTTCCCACATTTCCAGATGAAGAGG
CATTTGCCTGTATCGAGTGGGAGCTTGGCTTCCCTCTTGATTCAATGTACTCAGCAATGT
CACCTTCGCCGATAGCTGCAGCTAGTTTAGGTCAAGTTTACAAGGCACGGTTGAAATACT
CCGAGCAGCTGGTAGCTGTCAAGGTGCAAAGACCTGGCATCGAGGATGCCATAGGCCGTG
ATTTTTACCTACTGAGGGGACTTGGTTTTCTAATAAATAAGTATGTCGACATTATAACTA
CTGATGCTGTTGCTCTGATAGATGAATTTGCCCGAAGAGTTTTCCAAGAGCTTAATTATG
TCCAGGTATTTTGTCTTTGCGTATATTCTATTCATACAAGTATAGCCTACATATCAACTG
TACCTGTAAATACTAAACAGAATGAGTAAAATAGAATCAAGAGGAATACTTACAACATAG
ATTGCTGAATCAGCAGAATCAAATGCTATTATGTGTCCTGATTGTATGTTTTTATTCATT
ATTAATGGTGTTAAAAAACAATGAATGTAGGAAGGCCAAAACGCACGAAGGTTTAAAAAG
TTATATGCTGACAAGCAAGACATATTGGTCCCTGATATATTTTGGGATTACACAAGTGCA
AAGGTACTGACAATGGAATGGATTGAGGGTGTAAAACTTAATCAACAAGCTGCCATTGAA
GGCCAAGGCTTGAAGGTCTTGGACTTGGTGAACATTGGTATCCAGTGTAGCCTAAGGCAG
CTACTAGAGTATGGTTACTTTCATGCTGACCCGCATCCTGGTAATATTTTGGCAACACCT
GAAGGGAAGCTTGCTTTTCTTGATTTTGGCATGATGAGTGAAACCCCAGAGGATGCAAGG
GTAGCCATCATAGGGCATGTCGTTCACATGGTCAATCGGGATTATGAAGCGATGGCTCGT
GATTATTATGCACTTGATTTTCTGAAACCTGAAGTGGATGTTTCTCCAATCGTACCTGCC
CTCAAGAATTTTTTTGATGATGCTTTGGATTCAACAGTGAGTGAGCTAAACTTTAAAACC
ATAGTGGATGGCTTAGGTGCTGTTCTTTATCAGTACCCATTCAATGGTAAGTCATACTTT
GTTTTAGGTGGTATGAGGTTACATCTCAATTTTGTTGAGGCAGTGATATAATTCTTGTCT
ATTCAAATGTAGTACCGGCCTATTATGCATTGATACTGCGATCACTCACTGTGCTGGAAG
GTCTGGCGCTCTATGCTGATCCTAATTTTAAGGTGCTTGCTGCCTCATATCCTTACTTTG
CTAAAAGATTACTCACAGATCCCAATCCATATCTCAGAGATGCTCTGATTGAGCTGCTAT
TCAAGGATGAAAAATTCAGGCATGTACATATTCTGCTAAAACTAGCTTGTGCATTTTATA
TATTCCTTGTACCAGCAACCAACCTTTTACGATAGTATTGAGAATCACCTTTTGCTTTGC
TGCAGGTGGAATAGGCTTGAAAATCTTCTTGTTCAAGGACGCCAGGATAGAGAGTTTGTA
GCGAAGGATGCGCTACAACCGGTTTTGAAACTTCTACTTGGTCCAGATGGGGAGAATTTA
AGGGTGCTTGTTGTGAAAGAAGCGGTTCGTGTCACAGAAGCCATCACCTTTGGAACACTG
ATTGGTTCATACAATGCAGCTCCAGAATTTTTGAAGCCATTAATATCCAATGGAAACCCA
GCTGGACCCTTTAAGATAAGTGATGTTGAGCGGGAACAAATGTTGGAGCTACGAGACACT
GTTCTCAGAATATGGGGTCTTTTGAGATCCTCTGATACCTTTGATCCAAGTCTTTTGCAG
CCAATTGTACAGGTACACTGCAGCTTCATTCCTTTTATATGTATTTCAACAGCTCTTGAT
AACTCTGCAACTCATAGCAATTTTAATATCTCAGGTGCTACAAGAGCGTGAAGCCCGTGT
GTTTGGTTCTCGTATCGCAGGAGGTGTCTCCCAGCGCCTTGCAGCTCGCTTGTTGCAACA
GCTGCTCAGGATCCCACCTGCACCTGTTCCTGGATCTTCTTAGAATCTTTGTAGATAGGC
TCACACTAAACCATGTAAATTCACACGATACTTTCTGCACCAAAAGGAAAAAGAAAAGCA
ACTATAATTCGTAACCAGTACATAAACACCCCCTAATGTCAGCGTCTGTTTTATTTTCAT
TTGATGTTAGATGCAACACATTAGTATGTCTTTTTCTTTTACTGCTTGATCTTGCGTACC
AAGAGTTTCAGAAAGTAACGGCTAAGTAGTACCTAGTGGAGACTAAACCTGATAATGGTT
TCAAAACTGAACCATACTTGAACCATATCCGTACATCTAGCTCTTTGAATTATACTTGAA
CCATATCCGTACATCTAGCTCTTTGAATTATACTTGAACCATATCCATTTAATGTTATTT
TCAACCCAACCAAACCTGAACCCACTGCTTTTTGCACTTAAACCGTTTCAAACCGAATAC
ATAACCATGGGTTAAACCCAATACATAACACTATAATCTGGATGAATTACGGTGTGTACA
ACCAGAATAAAGATAAGTACTCCAGCATTTCTCCAAATAAACATGGATATAAGATCAAAA
CAGTAGTGCATCTCTGAACATTTTAACCTCTTAGAAACTGACTTGGCAACCATTAGACAT
GGATATAAAACTAAAACTTGTAATGAAGTGAAGTCAATCGAGACCATTAGACGGGTGGAG
TTCAAATAGTGATTTTGATAACACTATAACAAACCATGCTAAAGACATAAGTTTGTACTC
CATTCATAAATATAAGATGTTCTATTTTTTTCCTGAATTGTATGTGATTTATTTTATAAA
AGGGTGTGGCTAGGTCTTAGTTGACGGGATTTAACCAAGTCTTAATCAAGTGACGTAGTA
TATAAAGACAAAAAGAAAAAAAATGAGAAGAACAAAACTGTACGGATCTCCATGCAAGAT
CAAAGGTATATAGCATCGATTGAGACATAACGAAGTCTAAGTCGATTGAGACTTAGCAAA
ACTGTTTATAAAAGGGTGTTTTTATTAACTTAAAATGTAGCATCGAGCGGATACAAATCA
TGACAAACAACACCAACCTCTGCATATTTGAGATGCACACAACAAACATCAATAGTCTTA
CAAAAAAAAATCTGACATGCCACCATGCCAATATTGAAGGAGGTGATGAACCGATCCGGA
GATTATGCTACCACACCCATGTTGTGAAAACCTTCATGACCACCCGCTCCAACCGCATAC
ACACCACTAGGAACAACGGTTGTCACTCCATTTGGTGTAGCATAGACCATATACAAATCG
AGTGTGTACGACGGAAAATAATCTGCAAAGGAGAGCAAATTTTGCTAAAAAACCAAATCA
TTTCTACATAGCCAAAGCAACCATAACAAGGCGTACGCTTCCACCCTTATGTAATGCCCA
AGATGCGATACTATCCTCATTTTGGCTCGAGGACCTCGATGCGTATAGAAGCCCATCTCG
TCGTTATGCAAGAATGGATATCGTTACAAGTACATGTAAATAGGAGATGAGTAAATGAAA
TTGGCTTACACTCGCCACAAGCTAAATCATGATCATATCAAATACAATCATCCATAGCAA
TCATAATACATAAAAGCAGGGTCTAACTATGGACGAAATCAAACTATAAAAGTGACATCC
ATCTTGCTATCCTAGGCTGCTGGCCTCAAACCCATCCTATGATCGTTGAAGAAGAAGAAG
AATAAGAATAAGAAGAAGAACTCCAAATCAAACAAGCATCACTCTCACGTCAAATCATCA
CATTACCTGTACCTGTGATTGTTGTTGTAGTAATCTGTGAGCNNNNNGGACTCAACAATC
TCATTTCCAAGTGTATCAAGACTAGCAAAACTTAATGGGTAAGGTATGGTTAAGTGNNNN
GGCTGCAACAAGCACTAAGCATTTGAATATGTGGCTAACTTACGAGTACAAGAATAAGAA
GAGCGATCTATGTAAAACACACGTGAACTAGTAATGATCAAGAAGNNNNNNNNNNNNCCT
ACTTACGAGTCAATCATAACCACACCATGTTCTCTTCCCAAGCTCCCTCAAAAAGAGATG
GTCACAGTTATGCACACGGTTGGTGTATTTTAATTGAGTTTACTTCAAGTTTACTATAAC
CGGGTATTATAAAGTTTTCAAGTTGCCACATAACCGCGGGCATGACTCTTAGAAATATTT
AACCCTGCAAGGGTGCTCCAATT