morexGenes - Barley RNA-seq Database

Contig contig_1567159

Source Contig contig_1567159

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_1567159 (4652 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_1567159

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14055	1	132 bp	None	Available	Available	None
MLOC_14056	2	1396 bp	AK251601.1	Available	Available	None

CDS Structure of MLOC_14055

CDS Structure of MLOC_14056

Contig Sequence (4652 bp)

>contig_1567159 4652 assembly3_WGSMorex_rbca.fasta
GGCACGCCAATGGAAGGGAGAGAAATAAGAATAATTTAATACAGAGACATTTAATGCTGA
CTAGTAGTAGTCACCTTCCAAACAGGGCCTGACTAAAAACTTCTAGTCTGACTACTACTA
GTCACATGACTAGAGAGTATCCAAGCACCCTCTTATAAGTCACCTTTTCATGCAAAAGTG
AGTGACTTATAAGTTTTAAGTTGGGATGAAGCGACTTATGACTTATAAGTTAAGGTGATT
TATAAATTGGATCTATTTAACGAAATAAATCATTTTTTACACTTTTCAATTTATAAATTA
ATGACTTATTTAAAATCAAACAAGGCCTTACTTTAGTGATGTGCCATGGCTGATCGGTGC
GGGTGGTACCGGTCAGATCAAATGCCCCATCCATCCACTGCACTAGCACTGACTCCCCTT
TCGTATTAGTGGCTGCTGATGAACAGGGTTTATATTCTCCCTTCTTTTCTTCTCTCAATC
AACGCAAATAAATTAATGGATGGAGAGAACTGACGTGGAGTGAAACTGACGGAAAGACAG
CCGCGTTCACTTTCTGATACAGGGCCTGTTTGATTCATGACTAATTTTCCTACAACTAAC
CTTAGGTAAAGTGTGGTTGTCACAAAAAGTGTAGCTAACAAATTGGACACCACAAGTGTG
GTAAGGTTTGACAAAAAATTGAGTGTATGACATATGAACCATATAATTAAAAAAGTGTGG
CAAGCCACAAGTGTGGCAATGAACCAAACACATGCCTAAGGTATTGTGACATGACTAAGG
TTAGGCGTGGCAAACTTAGGCTGTGAACCAAACAGCCCCACAATAATATAATAACCGTGA
ACGAAAAAATAAAGAATCTAGAGATTCTGGTGGGAGGCGCCCTGCCGACTGATTGATTCC
TCGTGGCCTGTATGTCAGTGACGGGGCGAGAGAATCCAATTCATGCAGCCCAAGTGGACA
TGAGTGGAACCCGGCTTTTTGTTTGGGTGGCTGATTGCCTGACAGCTGATATTGATGCTA
ACAAAGAAAGCAACTCTCTACTAATATTTGTAACAGCACGGTTCATTGAAGGTTCTAGTG
TTAGATGAGAGAGGAGAAACGGTTCAAAACATGTATTTACGTGCGTCACAAGGATCTGCG
GGAATTGAACTGCAATGTGCAAGAAACTGACACTAGTTTCTACATTCCTTTCTTCCGCAT
GAAGCGTGCTTTCTTGATAAGCTTACTTTCTTCTTCTTTTTTGTTAGATCAAATTCCCTT
CGTATATCAAACAACGCTTGCTTCTGAATATATGCTAAGACCCCAGTTGAGCCTATCAGA
CACACGACATGCGGTTTCATAGGTATATAAAATATGCTGAAGATGAACAGAAGGCTAATT
ACAACAGTCCGAGAAATACAAATACGGCAAATACATACTGAGGTTTCAATGATGCCGATA
AATACGCCAGAAGGATGTGATCGGTGTACGGGTAAGAAGGGTTGTATCACGTTCAAGGAC
ACCGATCAAGGTTGTTCATCTGTTAGTGCAAACAAAGTTTAGGCAGAAAATTTCACGCCT
TCATCGTCTGCTGACGTGCCCTTAAAGATAACTGCCTTTCCCTTCTGTTCCAACAGCCTC
AAAGCTCGCATGAGGACACCACGATCAATTCCCGCAAGTTCTGCAACAGACGCCACAGGA
TAAAAAGATTCAAACTAGCCACAATACTAAGATGACTTTTATTATGAGCAAGGGGAATGG
CCTATGTATTATTTTATTTCATTTTGCAAATTATGGCCTGTGCACTACTGAATGAGGCAC
CATCACCAGCTTCTGTCACTGCCTAAGCTCCGGAGAGCGTAGCTGTGCAGGGGAGGTTGC
ATCATGGCGTGATAGCAGTTGGAATAGGCTTTTCGGAGGATAACCTCTGGTTTATTCATT
CATCGGATAACATGGAGTATCCCTAGCTTTATAGAATAGCCATCCCTAAAAGGAAAACTA
TAACTGCATAATTCCAATAGATTCTTATCCAAACTAACCGACTAGGGAATCAAGAGAAGA
AAAAAACTTATCACTAAGCCTAGGCTTAGCCAGACGGCTCCTCCTGAGGCTTGTGGCGGC
TATAATACCAAGCCCACCTCACAAGTTGGGTAAACATGAAAATATGTATCCAAAAGCTAA
GCCTAAATCCTACATGTATATTTGCGTCTCTACCGCAGGTTGCTTTGAAGCAAGAAAATA
AGCTTAGCGTCACGAAAATATTGAAAATGGAAAATCTTATCTCGTCTCGTTGAGCTAAAG
GGAGGTATATTTACCGGTCCCATGTGTTTGGTATACTTACCGGTCCCATGTGTTTCAATT
CCAGAGCGTAGATCTTCAATTGTTGTTACTTCCAACCCATTTTCCTTTACCTACAAGCAT
AACATAGAGATAAATATTAAGTCACTGTCACTACTCATTGATAAGCCAATAGCTCCGAAA
GAAACATGTTTAACAGAATACAAAGTCTTACGAAGTCTAATATATAGTTAGCCCAATCTT
GAATTCGCAGCCAAAGAATGAGACACTTCTTGTGACTTTTGTCAATCCACTCTGCGCGCC
CTGCAGTTTGAACTTGGCTTAAGTAGTTGCACAGCACAAAACTAAACACATGCCAGGGGT
AATAAAGGCATTCGGTACCTAGAAAAGCTAAACTACACATAGCTACAACAATAACTAAAA
GCTTTAATGTTGTGCAGAATAAACCTTCACTAACAAGAGCTGCAAGGAACACTTCCTTTG
CTTCATAACTTAGAGATCCTGAAAGCATGTAAGTTCAGTGCAACGTCAATAGGAATGTCC
AAATGCATTGTAAACTAGTCGAGTAAATAAAATTTTCATGTATACACTAGTCCAGCATGC
TCAAAAGGCTCCATGGTAGACCTTAGGAACACATTACCATCACGCCAGTTCACTATGTCA
TAATACTTTCAACACAGTTAAGACATACTTTTGCTGAATTGCAGAAGAGTAGTAGTCAAA
ACACAAGGTTCAGACAAATACAGCTTACTCTCAATCTTTTGATTGGAAAACAACGGAAAA
TCTTCTTCCAGGGAGATTATATACATCTTTTGACTTCTACAGTAATCAAGTATCAGCTCT
TTCCATAGCTGCACTTGCTTTTCGCGTGTTTCTCTCACGGGCTGCAAACTGGGAACGAAT
GTTGTCATGAGTCATGACATTATTATCAGTCCATGTACATATCAAAATGAGTGTTTACCA
GAAGTTTTCAAGAGTTGGTTTTAAGATAACATACACATAAGTTCACTTACATTACTCAAA
CAAATGTAAGAATTAGTAAAAGCAAGGAAATGGTTCAACTGCTACAAACACACTGTTGCG
ATATGAAAAAGATGTCAGATCTTAACATCACATATCAAAATAGATAGGCTTAGACACTCT
GAACCAAATACCATGTTATACTTTTGGGGATGCTCTGAAGTAGAAATTTGCAAAGAGACA
TTTGAGTTTTGACCAACAGCATATTCTGAAGAAACAAGTGCTTAAGCTAACTAACATAAT
TCCTTTAGTGATCCTGATCTACAAATCCTGCTTACATATTCATTCTTCACTTACACAACA
ACATTAACCACCCCGTGTTTTTCATTTCGAATCTATAAAGTGCCATTTTATACCTTATTG
GCAAGCTAGCACAGAATAAAACAAGGGATAAGAGATTAAAAAAATTTACATGATTTACAA
TGTACTCACATGATTATATGATACTCCCTCCATTCCAAAATATTTGTGGTTCTAGGTTTG
TACTAAGTCAAACTTTTTAAGTTTGACCATGCATATAGAAAAATACATTGGCATCTACAG
CATCAAATATATATATAATATGAAAATATATTTTGTGGCGAATCTAATAAAACTAATTTG
GTGTTTTGGATGTTGCCATATTTTAATACACTTGGTCAAACTTAAAGACGTTCGACTTAA
GACAAAACAAAAAATTCAATTATTTTGGAACGGAGGGAGTATATCTGAAGTAGGAATAAA
TAAGGTTAACTGTTACAAAAGGGCAGGGTATAGACAAAAATCACAAACCACTTTTTTGTA
CAATTTACACAGTAAATCATTGCCAAACAAATACTCCATAGCACTGGTAACAAATGCTTC
CTCCGTTCACAAGTATAAGATATTTTGGATTTTCCAATATGGACTACATACGGACTGAAA
TGAGTGAACAAACACGCTAAAATGCACCTATATACATCCTAGAACATCTCATACTCCTGT
TTTCCATACAGATGGTCACCATACTTCCGTAGAACCTCAGCAGCATCAGCCTGCTGACTT
TGTACAAGATTTATTGCAACTGTATAAAGATTCCTAGTTTTTGTGAACGGAAGGAGTATT
TTGGAACGAAGGGGGTAATTCAGTGAAGAATGATTTCATTACTACCATAGTACTTGGAGC
AGAAGTTAACTGCACAACTTTGTTGCCAGGCACTGATTAAGAATCTCCTACTCCGCCTAT
ACGGCTACACATACCGCAGAATCACAAATCATGCAAAATGTTCAAACATGTGACACTGGT
GCTGTCAGAGAGGGGGGGGGGGGGGGGGGNNNNNNNNNNNGGGGGGGGGGGTGAGAAGGG
GGGGGGCGGGGGGGAGGAGAGGGCGGGGGGGG