Contig Data
morexGenes
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Map Locations of contig_1566953 (6238 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1566953

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13974 3 1978 bp MLOC_13974.1 Available Available LOC_Os12g32760.1, FRAME:+2, EVALUE:0.0, 13112.m03342 protein transporter family protein, putative, expressed





CDS Structure of MLOC_13974






Contig Sequence (6238 bp)

>contig_1566953 6238 assembly3_WGSMorex_rbca.fasta
CTTCTTCTGTTCTGGAAAATTTTATAGAAAATTTTATTCTGTTCTGGATACACCATATCA
TCAACATAGCTCCATATCACCATATCATCAACATAAAACAAGAGAATAAGCTCCATAGCT
CCATAAAACAAGAGAATAAGCTCCAAAACAATCACCATATCTTCTTCTGTTCTGGAAAAT
TTTATTTCAGGGATTTTATTCCGTTTGCACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACACAGAAAAAACAGAAACTGGCACAAGGCACTGAATTAATAAATTAGTCCCTAAA
AAGATATAAAAGGTACATAAAACATACAAAGTTGACAAGATANNNNNNNNNNNNNNNNNN
NNNNNNNNNNTACGTTTGAGACGTATCAGGCATCTCATCACAATCCTATAGAAAAAGCAT
CTTTGAACTTTTACGAAATATACTTGAATAAAATTATTAGTTCAATGATGCATATGTTGT
GATTAATTATCAAAACAACCTTAGGGAACAATTGTGCTTTCATCATGCACTCTCACAATT
TTCCTTGATGAACTATTCAGAATCCAACAATCATCCTTATTTTGGATCCAACCCCAATTC
TCCACATAATACCATTTTTAAACGTTTGTATACAAGACCATATACTTTGTCACACATAGG
AAGATACTTTTTCCATCTCGCAATTAAGGATGTCTCATGTAGGATAATATCTTGATCTCA
ACCCCCTCGCGCAAAGAGAATCGTAACTGTCAATTGGCCTCTAACATTGCTTCGCAAGCA
TAGTTAAGTTGAAACTATGGGTATCCAGAAAACCCGTTCCTCTATTGTCGACACACCCTC
CCCCACCGCCTCCCTCATTTCAAGGCGGGCAAGTAATATATTTGTTGTAACCCCGCTTTG
CATGGTTAATTTTTTTCACCTATCTCTCTCTTCTTCCTAATTTAAAGGGGTGCCTCGCTG
GACATGGTTGCCTTGTAGAGCTAACTGCATGGTCGGAAATAACTCGATCTCGCCCAATGA
CAGTCACATTAATATGGCAAGATAAATCATGAGCCAACGTAGTTCATAAATATGAGATGT
TTCTTGATATTTAATATAGACTACATATAGACTGAAATGAGAAAACAATACATCAATATA
GATCCAATTTGCAAAAATAGATAAAACATACTCTCTCTGTTTTAAAATAAGTGTCTCAAG
TATTATACAGTTTTATACTAGAGCTAGTATAGAGTTAAAACATTTATTATGGGACAGAGG
GAGTATTATGTTTGTGAACGTAGGGAGTACATTATTTTTGCAGCATTACAATCGCACGGG
CAATTATGTACTCCCTTCGTTCTTAAATATAAGTGTTTATAGAGATTTCATTAGTGGACT
ACATANNNATGTATATAGACATACTTTAAAACGTAGATTCATTTATTTTGTTTCGTATAT
AGACTCCTAATGAAATATCTTAAAATATTTATATTTAGGAACGGAGGGAGTAGCCTACAT
GAAGCGAAAAACTAAGCCAAGGGGCGAACACGGTGGCCCATTACGGTCTACGTGCTTCAT
TGGCTTGAAGAAGAATGGCGAGCTTAGCTGCATCTTCGCTAGACGTTTTAAGTGTGCCAG
CTTACATAGTACTGTACTGTACAGTAGTAGTACTATCTTACGTACTCCACGTGGACGTGC
GCGTGCCAGCCAAATATTGTGCACTGGCACGTTGCTGATCGGAAGTCCCCACTTGTCATG
GACACAAACCGACACTCTCGAGGGCGATATAGGTGTGAACCGGTGCTCGTTTGTTTGTGT
GTGCTCGGTTAATAATCAGCTAACTTCCCCACAAAGAAAAATCAGGTAATCTACTCTCTG
GAAAAAAAATCAGGTAATTTATCATCAAAAATGATAAACATATAAAGAGTTATACATGAT
TACACGTTGATTCGGATCTTTTTTTTAATTAACCTTTTCCTCCTGATTTTTAAGGGGGTG
AAACCTCATTTTTTTTAACCTCCAATCAAAATCCACTTACATATAAAAACCGTGTAAACT
CATGTATGTGTAGTAGTCCCTCCGTTCCTAAATATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCGGAGCAAAATGAATAAATCTACACTTTAAAGTATGGTAATATACATCCG
TATGTAGTTCATTAATAAATCCTTTTTAAAGACTTATATTTAGGAACGGAGGGAGTATTA
CTGATTTACCACAGAAACAGCGCTCAACTCCGCGTCAACACGTGATCGATTCCATCGTGT
GTGTATATATATAAACTCGTATTTGTGTCCGGGGAAGTCGATCCCCCATTTCTCCAAAAA
TAAAAGAAGTTCCTTGGGAGGACCAACGGTGTCGCGCGGTCAACTAGCTATGCTCCAATT
CTTTTGATATAGTAATAAGTATAATAATAGTAATGGACAAGGAGCCACAGCGCCAAGACG
AGCTCCAGGCGCCGCTGCTTCCCGGCGACGGCGGGAAGGCCGCCGCCGCGGCCGGCAGCG
CTTACGCGCTCGTCTGCTCCCTCGTCGCCTCCGCAATCTCCATCATCTACGGTTACAGTA
AGCAAAAAAGCTGTGTCACCTACCTGTGGATGATCTGGCTGTGTCTAGATTGTGCATGCA
TGTTCCATGCATGTTTGCACCTTTCTACGCTTTGCGTCCACAAATTATTCTGATCCGCTC
TAGATCGATTAGGAGCACCTTTTTCAACTTACCTGAAGACTATTCGTGTAAATTTGGTTT
TGTATAGTAAAACTCGATCTCACGTCGTACGTGATTAATTCTGCCGGATCTATCTTGTTT
AATTGCGTGTTCGCAGATCGAGGTGTGATGAGCGGGGCGCAGAAGTTCGTGCAGGAGGAT
CTGGGGATCAGCGACGCGCAGATCGAGGTGCTCATCGGCGCCACCAGCATCTACTCCCTC
GTCGGCTCGCTGGCCGCGGGTTGGGCGTGCGACTGCGCCGGGCGCCGCCGCACTATGGCG
CTCTCCGCTGCCATGTTCTTCGCCGGCTCGGCGATCACCAGCGTGGCCGGAGGGTACGCG
GCGCTGATGGCGGGACAGCTCGTCGCCGGCGTCGCTTGTGGGTTCGGCCTCGTCGTTGCG
CCCGTCTACATCGCCGAGATGGCGCCGGCGGCGTCCCGTGGATTCCTCTCCTCCATCCCC
GAGGTTTGCTCGATTCGTTCGTGTTCATGTAATTTTGATCCTACGGCTCAATTAATTTAG
CAACTTTTTGAACGAATTAATTGCTAAATTAACTATTGCTTCACGCGAGTGCAATGCCTG
GTGCTAGCTATATTCCTATTTTTGGGCTGGGAAAATTCTCTGTTAACAAAATACTATTCC
CTTCGTTTCATCGTAATATAAAAACTGTTTTTTTTTGCGGGAAATAATATAAAAACTGTT
TCGACGTTACATTTTCATTCTATAATATAAAAATGTTCTTAATATTAATATACTGTCAAA
AACGCATTTATATTATAAAAAAAAGAAGTAATATAGTACTAGATGTTAGATCAAGTAATA
ATAAAATGTACTTCCTTGGATCGAACTGGATCCTAGGATTGCACAGAGAAAGACAAGGGA
GAGATCTCTAAAAAGAATCAGAGAGAGAGATAAATTATTGAGACGACTTTAGTTGGGTCG
CGTCACGTCAGAGACTAAACTGTCAGAATTATAAAGCGAAAACGAATCGAACTTCTCATT
TTATGCGGGAGGGATCGAACTTATCTGATGTAACGTAGAGTTATTATCCTAGTCATGATT
CGTTGGCACTTGGCCACACAGGGTACACATGCATGAATGCACCGGGAATTATTGTTCTGT
CAAGGAGTAGATCAAAGGAAAGGAGGGATCGTTCGCCAAAAAAAAGGAGATCAGTGAGTA
AATATAATCTTTACCGAAAGCGAATGTACAATATATTTATCACAATCTGTAAGGAGCAGG
GCATATCCATCCCCTGCTTTCGAAGAATGCCTGGATACTTCGACCACAGGCGTGGGTGCC
TTGTCATCCGATCAAGTTTCCCTCTTTCCCAGTTAGCAAATGCATTATATTTCCTTCATT
TTTAAACATAAGTTTTAAAAAAAATTATTATAAAGTACATGTATGTAGACATACTATAAA
GTACTCCATCCGTTTAAAAATAAATGTTTTAAACTTAATACAACTTTGTATTTGAGGTAG
TATAAATTAAGTTAAGACAATTATTTTGAGACAGAAGAAGTATATGTTTGTCCCATACGT
ATTCCATACTTCATAATGAAATCTTTTTAATGACTTATATTTATAAAACGAAGAGAGTAC
ATTCAACTGGGCCAAAGTGACAAAACTCGCGCTGTCTATCTCTTATTACCCATTTTACTC
TCACGTTCTAATCAAAATCGTGAAGGAAAAAAAAAAGACTGAAAAGCGAACAAATGACCT
ACTCTCCTAGTAATAAGACTGGTCATATAATCGTCATTTTGCCCGCAAATAAATAAATAT
AAGTGTTATTTTAGCTTTCATGGCATTTGCCTCTCATTCATACAGTAAATTAGTAATATA
TTTTTAAACATCGTTCATGGTAATTTGGATGGATCAATGCATGCTGCCTTATTCACACCC
TCTTTTATATGCCTCCCACGTCAGATCGCCGGCAACTCGGGGATCCTGCTCAGCTACATC
GCCGACTTCGCCCTTGCCGGCTTTCCCAAGAACGTCAACTGGCGCCTAATGATCGGCGTC
GGCGCCATCCCGCCGCTATTTCTCGCAGTCGCCACGCTCCTCGCCATGCCGGAGACCCCG
CGCTGGCTCGTACTTCACGGCCACCACGAGGAAGCCCGCCGTGTCCTCGCTCGCACCACG
GGCGACCCGGCCCTCGCCGACCGCCGCCTCAAGGAGATCGTTTCCTCCGCGCAGGAAAGC
TCGAAGCAGGCCGTCGCCGGCGGCAGAGACGACAAGGCGCCGTCCACAAGCGTCTGGCGC
GACATGCTGATCCGGCCGACGCGGTCCGTCCGTCGCGTGCTGCTCGCCATCCTCGGCCTC
CAGTTCTTCCAGCAGGCGTCCGGCGTGGCGGCACTCGTCCTGTACGCGCCGCGGGTGTTC
AACCACGTCGGAATAACCTCCCAGCGCGCGGTTCTCGGCGCCACGATCCTCCTCGGCGTC
GTCAAGACCGTGTCCATAGTGATCCCGCTTTTCCTGGCCGACCGGCTCGGCCGGCGTCCC
ATGCTGCTCACCAGTGCGGGGGGCATGGCCGTGTCTCTGCTCATGCTAGGCCTGTCTCTT
CGAGCGTCGCCTATGGCAGACGCGGGCGCGAGCGCGAGCGCCGCGTGGTGGGCCGCTGCG
ACGAGCGTGACGGCCGCCGCAGCGTTCATGGCGACCTTCTCGCTGGGGTTCGGGCCAGTA
ATTTGGATGTACGGGTCAGAGATCCTGCCGCTCCGGCTGCGAGCGCAGGGTACTGGCATC
GGCACGGCGGTGAACCGGGTGATGAGTGCCGTGGTGGGGTTGACGTTCATATCGCTGTAC
GAGGCTGTGGGCATGGCCGGAAGCTTCTACATCTTCGCGGGGTGCGCAGGAGCGTCATGG
GTTTTTGTCTACGTCTTCCTGCCGGAGACCAAGGGAAGGAGCCTCGAGGAGATGGAGGCG
CTCTTCGACGATTCCGCCAAGTCGCCATCGCTGACGGCGCAGTGATCAATGATGTGCGAT
GCCTGCTGGTAACTACGGTAGAAGGAAGTCCATGTCTGTTGTAATTCTTCCCGGTAAAGA
CCTGGCACTGTTGGCTCGATCAAGCAGTTTGTGTTGAACTTAAAATACTCCGATCGAACA
GTGTTGGCACTGTTGGCTCCTGGCCCAGACCGGTTTCACGGGTGCATTCTTCAAGAGGTG
CTGGGAGGTCATCAAACATGATATCATGCGGGTTATCCAACTGTTTAACTCTCTTCACAC
ATCCAACTTTCAATGATTGAACTTCGTCAATGTGGTTCTCCTGCCTAAGAAGGATGGAGC
GAAGGGCATTGCTGATTATGGGTCAATAGCTCGTGTGCGACACATTTGACGCGAATTAGA
TCCTGTGCGACACATTTGATGCGAATTGGATCATGTACGACGTTTCTCTGGCCCAAATAG
CCAAAGGCCCACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGGTTATGTTTAAGAC
ATGTGGGTCCTACTTGGCAGATCGTCAACTTACGGCCCCACTTGACAGTGCATCTACT