Contig Data
morexGenes
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Map Locations of contig_1566875 (7131 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1566875

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13941 4 1779 bp MLOC_13941.2 Available Available LOC_Os09g27950.1, FRAME:-2, EVALUE:0.0, 13109.m02746 protein galactosyltransferase, putative, expressed





CDS Structure of MLOC_13941






Contig Sequence (7131 bp)

>contig_1566875 7131 assembly3_WGSMorex_rbca.fasta
GGGACACATTGTAATCTATATATTCACACATGTATTGCGGTTTTCGGTTAATACAATTAT
ANNNNNAACAATAGACAATTATCTTGAACTAGGAAATATAATAATAACCACTTTATTGTC
GCCTCTGGGGCATATTTCCAATAATACATCCATAGGGCAGTGTGCCCCGAGCTATATGGA
AACACGATCTCTGTCGGGAGATACCACAAGTAGGCCCTCGCGTGTTGTTCCACGGTCCAC
GCGCCGGCACCTTGCGGGCATCCGGACGGTTGTTAGCGTGCCAAATTAGTGCTATACCGG
ATGTTTGATTATCCATCATGCCATCGGCCTCGTTACGGATAGAGACAGGACAATCACCGA
TGAGGGCGACAACCCTCCCCGCCAGTTGCTCCTCTCCACTCGTCCAAGGAGACCTCGACC
CTGGAGCACTAGGGCCATGATCATGCTGAAGTCCTCAAGGCTCACCGTCATCTCACCACA
TGGGATATCAAAACTGTGCATCTCGACCCGACAACGATAGAACAATGTTGTGAGAGCTGA
GTGGCTGGGCGTCGACGGCGCACGCTTGAGTTGAAGCACAAATAACAACAGCCCGGCTCT
CCTGAAGTACGGCTCAAAGCGGCAGTCGTATCGCATCTGGCAGGGTGACCCCTCATACGC
AATGGTGGTAGTACCTGCGAATATTTAGATGAAAATAGTCAGTAACTTACTTTTTCAAAA
GCCAAAATTGTGTTGCAAGAACTTGATCATGGTTATAACCATTCCATTCTTCATAAAACG
TGCGCAATGACTCTTATCGAATGCAAGGTCAAACACGATGCACTTAGTGTCGATGTTCGG
ATCAAGAGTCCTCCTAAAACAATTGTCAATGCAAGTTAAATTTTTAACAAACAAATAAGT
AACATATAGGATCCAAAATGAATGAAACATGTAATCCACACATCTATATGTATGCATCAC
ATTTGTTCATCAACATTCATAAATAATCAAATTACAAGATGTGCTAGGATTAACCTATAT
TAAATTATTAACACATCAAACATATATCCACACATCCATTGTAACTGTATTTAGTTAAAA
ATGAATTGATATATGCATATCAAACTAAACAAATTCATCTTTCTAAATATATACATCCAC
ACATATATGCACATGAATTCCTTTTAAATACAGTAATGCCACAATATGAATTACAGTTCA
TCCACACATTCATATATCCATCACATCCATACACACATCAATTCTAATTAAATTTAGTTA
CAAAAAAATAAAAATAATAAAAGATGACTAGGGTGCACCTATATCCCACACATCCAACAA
ATATCCATCCAATCATCAACACATCCATATATCAAAATTTCAAAAGTTCAAGATGAACTA
GGGTTCACCTAGTGCCAAAAAACCCATCAAAACTAGAGCTATTTGACTAAAACTAATTGA
AGGGATCGAAAGAGCTTACTTCTCTCTTCTTGGAGGCATTCCGATCCACAAGAATGCCGA
AGAAACGGAGAAGATTGAAGGTGGGAGGTGAGGGGAGTGCGGAGAGGGGAGAGCCGTTGC
CCCTCTCCGTTTCTCGGGCTGTAGGAGGAAGAAGGGGGCTGGCTTGGTGGGTGGGACCCA
CCAACCGGCCCCCTGCGGCCTTTAACTGTTCAACCCTACCGCCGATGATTGATGGTGATA
GGGTATAATAGTCTACCGTCAAAGACCTCTACGGTACTTCCGCAAAAAAAAAAAGACCTC
TACGGTAGGACTAAAGGCAGGGACAGTGGGCCGTCAAGGATACTGACATGGATAAATTCC
CTACCCGTCAGGGGCCTCGACGGTAGGTTGTTTTACCATACCGCCATCGACCCCGGCGGT
AGAAAAATGATCAGACCACGGATTGTTTTCATACCGGGGTCGTATCTTGCTTAAGTTTTT
CAAAAAGATCAAAACACTGATTTTGACCCAAAAAGGCAGTCGTGATCTCATCTCCCGTGG
AAGGAGGTTACGAAGATGCCAGCTTCCTTAACTCTGCCACACGCAGTACACAAAAGACAA
AAGACAAAGGACGGCGCAGACGATGATCTGTTCGTTAGATACAAGGCCGGGCTTTGTTCA
ACTTCCAACTTCCTCAAGGATGATCACGTACTGGTACTCTGGTAGCAGACGAAATGAATC
AATTAATTGAAAACAGTTATGTTTATGTACGGAGAAGATCAACATGTATACCCCCAAACA
AGCCCCTGCATCCGTATATGACTATCACATCTATCTCTACAAGATACAAAAGAGAAAGAA
AAAGAAAAGAATGAGGTGTGTCCGTCCGGTATTCTCCTCCTGTTTGTTCCTTCATACATT
CATCACCAGATAATATGCGAAGTCATCCCTTCTCTTGTCATCATCTCCCACCCAACTGCG
TTGCGGTCCGATTTCACGCTCGGGGAGCCTTCAGGCAGCTATGATCTGTACTGTTTACAT
CTATACCCGGACAGAACCTCTTGACTCTGAATACTTGTTAGGATCTCTCGTCAGAATGAG
GCGCTCCAGATCGCGTCGTCTCCTTCGCCGCACCTCGCGTGCACGTCCTTGAGCCGCTCC
ACCGGGTTGCAGACCCCGCTGCACCTCCAGTCGAACGACGCGACGCAGGCATTCCCTGCC
TGCGCCTTCCACTCGCAGTCTGAGATCAAAGCCGTTTCAGCAAGGAAAAATGTTAGTGCC
AATCTTCAGAGATGGTGCATGGTGTGAAGAACAGCTGAAGGAACTGACCTGGTGGCGTTC
CACAGCACATGTCCCTATCGTCGATGTGCTCCACGTCTAGCCCGATGAACCATGCTCCCA
GCGATACGTCTTCGTTCGCAAATTTGTGCAGCAGAGGCCTGGGTGATACGCCGAAAGCAG
GTATCAGCAGCAACTCATCATACGCAAATATATTGCCTGAATGAGCATCGTCTGTTTTCT
AGACTTACTTGTTGACTGAGATGTAGGTGGCGAGGTCCTTTGAGATGGCGTATATTTGCC
CGGTCGCATGGCGGAAGTACTTGTTCCCGTCTTCTCCGAACTTCCAGAACTCGGGCTCGT
GGTATTTCGAACTTCTGAACAAGTTCGGTGATATTCAGAACTTGTAAAATAGGATGCATT
GATACGTCGACTGTACTACTAGCTAGATGGTGTTTTCAGAAGGTTTACTTGTCGGAAAGA
ACCGGTCCAGACTTCATACAGCCAATGTAGACACGGGGTTTCAATTTCTGCCGCCCGAGG
GTTGTGAGGAGCATTCCTGTACCACATACATCAGTTAGTTCTCTCCAGTATGATTGGGAT
TAAATTCAAAAACAAAATGATTGGGATTTCATAAGTATATTTATATGTATGTATAACATT
ATACCTAGGTTGACATGGACATCATCATCCACCTTGACATAAAAATCAGCATCCCATGAG
GCCACAGCAGTGGAGAAGAATGTCTTCGTCTTTGCAGATAGCTTGTGGTAACCTTCAACA
TGGTCCTACACGCACGTATGGATGTCAGAATAAATAAATAAACCATCTAGAATTGTATCA
GAATTAGCTTCAGTGTTGAACCGTTGACACCTCAAATCAATGATGTCAAAGAAGATTTGG
TAGATGGTGGTTTTAACAGAAAGGGGGGAGAAACGATGCAATTCATTGTTTGGAGAGTAA
CACCATACCAGCCTAAGAAAGTCATGATGAATAGCATCTTCCACGTCTATAGCCTGATCA
AGGGCACTGTTCGATGCCGGACTGTAAAGCATAAACAGATGTTACTGCATTTAAATCCAT
GCCACTAAGTGGTAAGACTTATGGAAATATATATAACACCCTCAGCCAAGGATTCCTAAA
ACTAAAAAAAAGGCTGTCCAGTATGGGCTCTTGTATGTGTGCACCTTATATTTCCTGTAA
GAAATATACGTTTTACCAAGTTAAATAGTTGTGGGTGAGTATACTGCTTCTTTACCAAGT
TATGACATACTCCCTCCGTAAAGAAACGCTCTTATATTTCTTTATGGAGGGGGTACATCA
TTGTGGATGAGCATACTGCTTCTTTACCAAGTTAAATGGTTCTGAAAAGATAGTAATACA
ATGTACTGAAGGTTGAGTGAAATCTGTTTTTTTGGAATTTGAGCAAGTGAGTAACTACAG
AAATCTCTGAAAATCAAAACAGAACAAGAAACTGAGGCTTTATGGAATCCTTTTCTTGGC
TAAAATATGTAAGCTTTCCATGGAGATGTTTACAATATATCTGTTGTATGTTACGGTTTT
TCTTTCACGGAAGCTCATCTTATGATTTGTTCAACAAACAAGTTATAAAATACTTAAGCT
TAGTGTCAGTAATAACCCTACCTATGCCCAATCATGAATCGGATGACGACTCCCTTTTCC
TCTTCCAACTTCTTGAGTTTCTCGCCTGATAAATAACAACGAGACATATGTGGTGAAATA
ACTGTCAGCCAACTAAATGATCCACCCCACCCCAATCTAAATAGATCAACTCTTAGCAGA
AAGTACACAGGCAACAAACAAAATGTATGACCTGAGGCAGCTATGATGATAAATAAACTA
TATGATTATTCAAGTTGCTATAATGATAAATAATCATATTTAATTGATTCTATTTGCTAT
GATGATGGATGATCCTATTTGATCCCTTGATTCTGTACTTGCACATTTGTCTGTAATTTC
CTTGCTAGCTGCACACCATCACCCTAGTTGATTAAATACAGATCCCCCTGCATCGGTCCT
GACTAAGAACAAGAAATCAAGCAGGCAACAGCTAGGCCAAAACAAGGGAAGCAATCAGGT
AGCATTGCAAAGTATGAACCTTGAGGCATCCAGGTCTCCCTGACAGAATCCCGTCGCTTC
TTGCTACTGAAGGCGGTGTTGATCCCGATCACCACAAAAGCCTTCTTCCTGTCCTGCATC
ACGCCATCCGCACTCTCAAGCAGCTCATGCTTGCTGCGCCGCGCTGCCAGCTCCATCTGT
AGCGTGGCGATCGACTTGTCTAAATATCTAGACACAAAGTGATATAATCCCTATTAGTCC
CCTAATAAAATATAAAAATGCAGAGAGTTTCAGAACAATTTTCAGGACTGATGTCAACTT
ACTGTATGGCCTCATGAGTCTTCGCGACTTCCCCCATCACGTCCCTGTCGTCAGATGGTT
TCTGAAATAAATAAATAAAGGTGTCCACAGAATTACATATCAAAGGGGAAACTGAAGAAG
ATCAGGGTTTTCCTATCTAAATGTCCATTTTAATTCTGCAACTATTTCCTGTAAAAAAAC
TGATTTATTCATCTTATGCTGATAAACCTTTTTGTTCTTTTTTCCTGAAATAAATCAGGT
GCCAAAAACAGACGGTCCCTATCAAAGTACCAACGGGTGTTTACAGTCGTTTCTGCATTG
ATAAAATAAATGATGCCAAAGTTTACAAACATGTAGTAGTATTAATACTTTTTTAAATGC
AACCAAGCATAAGTTTCATCAACATAACAAGAGTAAGTAAATAGAAGAGCAGCAGGGGTA
GTAATAAGGTTCATTGGTTAGTCAGCCGCCCTCGCGTACCGTCTTGGCAACAAAGTCTTC
AGAAACGACCTGCAGCTCCTCTTCCTGCCGCCGCCGCTGCGCCACCACCGGGCTCTTCAG
GTCCGGCATCGCTCCGAACCTGCGCCAGACCGTCGGGACAGAACAGAGCGGCGCCGTCAG
CTACAGGCCTACAGAGCAACCGGCGAGCGGACGCATGCATCCAAGAAAGCGGCGAGCGCA
AGGAGGACTCCGCCAGGAATCCGATCAAGTAAAAAGAAAAAACAATCTAGGGGGAGAGGG
GCTGACCGGTCGGTGAAGAGCATGCCGAGGCCGAAGCTGCAGGCGCAGAGGAGCAGTATC
GTCCTCGACAGCACCGGCCTCCTCTCCCCGGCGGCGGCGCCGCCGCTCTTGGCCTTCATC
TTCTGTGCGTGGTACGTGATGTTATCGGCTGGAGCTGGCTGGTCCGGGGAACGCGTGGTG
CGCTGCCTGTGCTTGTGCTGTGGCAGGAGCGAGGAGCCGAGGCCGGGCTTTATGAAGGTC
CGAAGTAACCGAAGCCGCGGGGAGGGAAACACAAAGACGGAGAAGAAGACTAGTTTATTA
ACGGGTTCAGAAAGGAAAATGCTGCGTTCACAATGCTGGGCTGTGAACGGGGAGGGGTCA
GAGGGCGGCGGCTGTTTTCCTTTTTTCTCAGAGACAGTGACAACGGGGAGGCGATTCTTA
CGTTCGTTTTTTTTTGCGGGGTTATTCTTACGTTCGTTTTGTTGGGGGGTAATCGGCGCC
ATCAACACCTGCAGCGCCGCAACCATCGAGTCAATTAATTCCGTGGACCGATAGGCATCT
TTGGTTGCACCTGAAGTAAAAAATAACATGGATTTCCAGTACTTTCTTCATCACGGTTTT
ACAAGGCATGTTTGTAAAATCTCTAGGACCAAGGTAGACACCGATTAGTTGTGAGATGTG
GCAGATATAAATGCTAATGCGCCTAACCAACTGAGAAAATACTAGTACTCCCTTTTTTTT
TAGTCTGCATATAAGATTTGGTCAAAGTCAAGATATACAAAGTTTGACCAAATATATATA
TCAAAAGATATCAATATCTATAATACTAAATCTATATGCTATGAAAATTAAATATTATGG
TGCATCTACTAATATTGATTCAATATTATAAATGTTGATATTTTATTCTATAAATTTAGT
CAAAGTTTATAAAGTTTGACTTTGACCAAATCTTATATGCGGACTAAAAAGAAACGGAGG
GAGTACTAATGTTATCCGTAATGGAAGTATCATAACTAGTATCATGCATGCCAACTAATC
AACTTTGATGAGGTGACATAGAATTAAATAAAGAAAGAGAGGGTTGAGTATCATATTATG
ATAATGTATCATATGAAATGATGTACTACTATGTGTCTTGCATGACAATGAACTACCCTA
TGATAGTAATATATGATACCATGCATTATGGATGTGGTATCATACACTAGTATCNNNNNC
ATGATACTAGTATATGATACTACCTATTACAACCATCCTAATGCGTGAGCAGCAAATTGG
GAAGACGCATGCATGAGCAGTACTAGTATATGGTACTACCCATTACAACCA