Contig Data
morexGenes
Links



Map Locations of contig_1566712 (3550 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1566712

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13876 4 1578 bp AK369503 Available Available None





CDS Structure of MLOC_13876






Contig Sequence (3550 bp)

>contig_1566712 3550 assembly3_WGSMorex_rbca.fasta
GGGAGGGAGGGAGACGTGCGTGAGAGTCAGGAAGGGAGGGGGAGGGGGAGGCGGCTCGGT
ACACTGATATTTGATGCACATGGACTAAACACATAGTATGGTATGCTCTTTCGAACAAGT
ACACAGATGTAATCATACATGTTTGCACACTAAAGACGAATAATTGATTGGGAGTAAACT
ATTAGTTTTGTATACTTGAGAAAACAACAAGAAAAACGCAATGTGAATAGCTATTTCTGA
TCTTTTGAATCATTATTTCCAAGCTTTAGCTGCTCTGTCTAGGAGAGATCATGTCAAAGC
GCAAAACAGAGGGAAGAGAAGACAGAAGAGTACGTACCTTACGATAAAGCTTGTAGATAA
GTTCATCATATGTTCCATTACTATTTCCTTGCCCGTCATCAAATCCACGGTAGGTATATG
GTACTTCGTAGGGTAGATTAGCAACTACTTCATCAAAAACTTCGATGCAGAACCCTTTTT
TGCCTTCGGGGCCATCTTTATATCTTACAAATTGGCCAAACCCAGGATTTGCAGGTACAC
CTATTGTGAGAATTTTATTCCTCGGCAATAGCCAGCCTCTAGGAACAGTTTTATTGTCTC
CTGGCCATATGATGTTAATATTAGACTTCATATTTAGACTACTAGAGATGCCAAATTCTG
GAGTCCAAAAACCAACTTCTCTTCTCTCCTGACCAACAATGTTGATTATCGTATAAATTG
ATGATACTAACTGTGTGTTTTCAATACGAAAATTTCCGCTCATGCCCGAAAAGTTGACCT
TCAGTAGTGCACCTCGCAGTTTTTCAGCAGCCTTTGAAGTATCTATTCTGTCAAAGTCAG
TGGACCCACTCTTTGTTACAGACGGCCGAAAATCTCGCATATCCAGCCTTCTCTGCAGCT
GATGCTAACGCCCATATGGTATCATAAGCATAGAGACCAGACACTGTGGGTTCACTTAAC
GAGGTGCCTGGATTTTCTAATCGGTACTTGCTGTGCCATCTCTGTGAAAAGTTTTGAAGT
TTCACGGTATCTTGGACATGAGGTTTCACCCCAAGAACTCCTTGCATCACATCTAGAGCC
GGAGAACCAACCACATCAAAGATATCTGTCAAGCCATACGCGGTAATCCAGACAAATCCC
TGGCCCATCATCCCTTCTTCCTTAGCAAGCTGGAAAAACTTGAGGGCTAGCGCATGCGAC
ATCCGGACAACAAATACGCTTGTCCAACTGTGTCCTAAGTTTGAGATAGCTGCCTTCATA
GCATCCTCTGTAGCTGAAGGATGGATCTTGCACCTGTAAGAGACACGCGCGTCAACTCGT
TTGAGGGCATCAACAAGGTCAGGAATGAACTTGGTATTGGTATCATCATCCTCAAAGACA
GGGACGACTTCCCTCCAATTGTGTTTCTGAACAAGTGAGGCGATGGCTTCTGCTTGAGAG
GAGTCGTTCCATGCAGTCCGGATGAAGTACGGAGTGAGTCCGGATCGTGACGGGCAATCC
GCGGAGAATGAAATGATTGGAACCGATGATTTGTTCCCGAGCCGCGCAAGAAATTTAGCC
TGGGTCGACGTCTGCGGCCCGACGATCGCCTGCACGCCCACATTTTTCAGTAGATCAACA
CCTGCAATGCTGTCATTTCTTAGGAAGTGATTCACAGCAGTGGCTCTCACTCATAATACG
TACGGTACATGATTAAATTGGTTGGCGATGGAAAATAAAACACGAAATGTCGGATTTACC
CTCACTAACGGGGCACTAATATTAATAACCAAAAGTTGGAGAAAGCTATAGGTTGGCTAA
ACGGCTTTGATTTTCCAAGTGTTGAAACGCCGGCCGAACTCGCCGATGGGCTCCAACTCC
AACTCCAATGTCTGCCCTCCCTGGCGGCATGGGTGGAATAGAAATTGGAACATCAAAACG
GTCTTCGAACTGGGATTCGACGGCTACATGGCTCAACGAGATGTGGGCCGGGAGAAGGGG
TACCTTGTCTGTGCGCCGCGGAGGGATGTGTGAGGACGAGCAGGAGGCAGGAGCTCAGGG
CGAGACTAGCAGCGGAGCTCGGACCGCCGGCCGGATGGGAAGATAATTAAACGGCGAGGC
GAGCGCCGCCGCCCCGACTTGCAGTTGCCGAGTCGGATAGGTTTTTTTGTTTTTCCTGAG
AAAGAAGGATCGGATATCTTTGTGGGCCAATTGTAATGGGAAATCTCTAAGCGCCAAAAA
CCTACGGCTCGCGCAGAAGATTCGGCCCATAGCTAGCCCATACCACCAGGGCTCAAAAGT
TTTTCTGGGGGAAGGACGGATTGGTGCGGCTAGTTTTAATCACTCTTCGAGTTCCAGTTG
CAGGAATGCTAAGACTATCTATAATGAAAGGAAATATAAAGTAGTAACATGTATATGTTA
TTAATTTAAGTAATTATCTTTACAGTGAATAGTAATATTGATTCTTTTATTTTTATTAGT
TTATAGACTTAAAATATGTGTTATGTTACTCATAATATGAATAACTAGCTATGTTACTTA
ATTTCTTTTATTATTATTAATTAGTTTTTATATCATATTATTTTACTTAGGTGATATCTA
TGTTGTTACCTATATTACTCCAACGGTGGGTAGTCTAGTAAGGCTGATTTATGATTCAAA
AGTTGTACTCCCTTTGTTTCTATATATTTCTCCTTTTAAAGATTCAACTACAGACTACAT
ATAAAATAAAATGAGTGAATCTACACTTTAAGTTATGTTTATATACATCGTATGTAGTCC
GTAATAAAATCTTTAAAAATACAAATATTTAAAAACGGGGGAGTATATAGTTAACTCGGA
GGGTAATCCGCTGGTTCCGCATTGTTTATGACGTAACAGTTGTTTGAAGTTAATAAAGTG
CATGGCAGTCCCTAAAATAGTCGCCCAAAAAGAACCCGGCAGTCCCTAGAAAAAAGGACT
CGGTTGAGAACTTGAAATCAGCAGACTAGACAAAGGGGCTAAACATTTGCGTGTATGAAG
CGTAGGTCAAATCGTTGACCGCATCCAATCTTTTGGGATACGAAACTACTCACGTCATTT
TTAAATTTTGATTTAGAAAAAACCCGGCCCTAGCTGGGTATAGTGCTTTTGCCTTGAGCC
AACGAGAAGACATCAACAGATCAATGGAAAATGGTGGGGAAAACACAGCGCTGTAAACAG
AACTGGATCGTCGGCGCAAGGGGATAAACCTTTTCTCTGGAGTACTGTATTTGCCATGCA
TGCATGGCGGCTATAGGCATGAGCGGCTAATTTTAATGCTCGGTTTGAGCGACGCACTTC
CGTACCTGCGGCAGCGGCGTGGACAGCGTCGGGGCCGGTGTCCCGGAGGTGGAGCTTCAG
CCTGGTACCGTGGCCGGCCTGGCCGGCGTCGGCGTAGAAGTCCTCCACGGCGAGCTCCAT
GCACGTCCAGCTCATGTTCCCCACCCATGTCGTCCTGTCCAGGATCACCCCCACGTCCAC
CACCCGCTGCCGCCGGCGAGGAGCCGCGCCGCCCCCCTCCCCCCCCACACCGCAAGCAGC
GCCCACCAGA