Map Locations of contig_1566640 (3390 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1566640

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13843 1 748 bp AK250477.1 Not available Available None





CDS Structure of MLOC_13843






Contig Sequence (3390 bp)

>contig_1566640 3390 assembly3_WGSMorex_rbca.fasta
TCTCACTCCTGCATGCATGCAAGGGATAATTAATGTCCTTCTTTGCTAGTACTACGAGGC
AAACACCATTAATATTGCATCGANTAGTGTTAGTGGCCTTGTATATATGCAAACTGTAAT
TTTGATAGTGGCCTTGTATATAAAAATGGAGGGAGTATGACTGTTTTACCACAAAAGCTA
TGAGTATTCACAGGTCGACACTAGAAATTCATCATTCTGGTTAACGCTATTCGCAGGATA
GAGTGATCAGGCAATGAATTATGTACTGTAGAATAGATAGAATTACCTCCCTTTTGCAAA
GCTGTCCTTACTGCTTTCAAGGTACTTATCTTCTTTTTCTTGTTTATAGGGAGGTTTGAG
CCATTCATGAGCTGAACTGATATATCCAAATCTCCTGATTTTGAGTAAAGATTTGATAGA
AAGGATCCAAAAGGTTTTGCAGCAGCACCTGTAAGGAAAGTGAGAGAATTAGGTAAAGCA
ACATTTAAACTGTATCATGAGAAACTTCAAACACCTTTCACTTGACGTTATAGAAATTTC
AAATTTCTTGACCTGTATGTTGATTAATTAAGTCTATGACAAGAAATAAATCTATCCTCT
TTTAAAGATCATTGTGTGTCCTTTGAGCAACTCATAACCTAGCAAATCACACATTGTCAT
AGAATTTTGTCCAATGCTAGGTAATAAACTGTAATGTGCCATATAGGTCACTAGTTACAC
AGTGGCAGACACCTGGACCTGTCAATGAGTCACCGTTGCAATACTTAGTCTCTAAATGAA
GTGCATTCACAGGTGACTAGATTACCGCTTCTCATCTATCATCTTTGGTTCTTTGATATT
TTCAAACACAAACTACTCTAGGGCTATTTAGGAATACAATAGACTTTATGGAAAACCTTT
GGGGATATATTCAACTTTGCAGACGTCCTGTAACGGATTACAAACACTGTGTTTCATAAA
TTTATATCAAAAGTCCATGGACAAAAGGAAAAGGCTTTCCCTTCAGTAGTGCAGAGTACA
TCACAAACTTCACTGTCAATATCAGGCTCATTTTCAAATAATGGATAAGGCTCCCATGGT
AGCCAAAGGAGTAAGTTACCTTTCAAGGCTGCAACTGGTTGCATGGAAACTTCCAGCTCC
TTAATTGCAGATAGTCTTCTGTTCAGATCATCCTCTGCCGGTTTTATTTGAGAGAGGATG
TCTTTAATACACTTCTCCAGCACATCGTTGTTGGGGACAAGTTCAATCATGCTGAAATAC
TGAAGCCAAGAAGAAACATAAGATCAAGCAAGCAAAAAAGGGAAAGTCATATGGGTGTCA
ATTAGCACCGCTAAACACTAGTTACAAGTACAATGATTGCCCTGGTTTTCTTTCATACAA
AATTTTCCAGGACAGAATGTATGAGCCATTTTTCAAAGAACCATAACAAAAGAAGAAGTT
CGTGGAGCACTGCATTCTCCGAGACAACCAAACATATCCGTAACTCTCTACAAGTAGAAA
ATTTATGGAGACCACAAACTAAAACCTAGAATCTTCATGATGAGAAGACAGTGGATTTAG
AGGCAGCGCTACCAAGTTTTAACGCAATGGGGATTTTTGAGTATAAGTGACTCCCCTATG
ATCTTGATGTAAACGAGGCACATGGAATGGAATACCGTCAATTCAACTCGGAGGAGTGGG
GTAATTTGAAAATCTCCTACCATATTCAACTATGGCATGAGGGGAAGCATCACTGGCCAA
GTCAATGGATGGAGCCTTTTTGTGCATGTCCTATCTTGTTTGTGTTTACCGTACCTACCA
TTAACACCCATCATGGCAAACAATCCACAAAAAAAAGCTCCCATGGCGCAAGTGATTGTC
GCCTCAAAGGCGATTTTTTCTAAATATTGCAGCATATGCTCATCCACGCAAAGGCAAAAC
CTGAGTACAACTTGGGCCATTCACCACACATGGCATCACGAGTCTTAAAGTAGCTTAATT
TGGCGGAGTAGGAAGCAAAGCACTGACATGGCGTGCCTCCATGTATCGAGTATCAGCACT
CGAAGCAAGATGCATTTATTTAATCAGAGCGGGCGGGGCCCTAGCGCGATGGCCAGCGAA
ACCCCACAACCGACGCACACACGCACCCGCTATTCCCAAAATTTCACGCCGGGGTTCGTA
CTTCGTGCGGACTAGCCGAGGAGAAGTGGCGAGGGGATTTTTACCTGGAGAAAAACAGGA
GATAGATCTGGGTTGCTGGGGGAGCGCGAGGTCGGCGGCCGATGAGTGACGACGGCCGAT
GAGTGGCGGCGGCCTCGTGCGCTGAAGTCGCGTCGGGTCAAGGGGGGCAGGCCGACGAGG
GACGAGAGGCGGAGGAGGAGGAGACCATGGCAGGCGGGGGGAAGGGTTATTAGGCAGCGG
CCGCGCCGAGTTGAAACGGGGGCGGGGACGGAGACCTGGTCGGGTTCGGAGACGCCGAAG
CGGCACGCGCCGGAAGCCGTGGGGGAAAAAGAGGCAGAAACCGAAGCTTTGGATGGATCT
GTGGGCCTTGGGGTAGTTAATGTGGTACGTTGCTGACTCGATCACACTCCTTTACAGATG
TAAAATTAAATGTACTCTACCCTTTGTCATTTCCTAGTACCTTCGGTGCTAAGGCTAAAT
TTTCTTTCTCTGTCAAAAGAGAACGCTGATTTTAAATGTTTTCTAAGAGCAACTTCAACG
GGTCGATCCAAACAGACAACGATTTCGTCCGCATTTTATCTGTTTGGATAGGTCGCCCGC
CCGGCGTCCACCCTGTTTTAGATATGGATCGGCAGCGCGCCCAACGCGCCGACCCATATG
TGCCGGCGTGACCGGCTGGCCGTCCTATTTTGTATGATTTTAGTAGTTCGAATCGAAAAT
AGCATAGTTATTACAAGCCGAATAAAAATAAAAATGTCTCACATAGTTCGTACATAGTTT
TGCCAACGAATAAAAGAAGATAAATCTATTGGTTGCCAACATGAGCCCACGTATGTTCAA
CCAAATCATTTTGCAGTTGCACGTGAGTTTCACAATCACGCATGTCTTGATGAAATTGGG
TGAACTGTTCAAACTTATCGCTCCTCCATGCTCACGCACAACATTCTCACCCTGAAACTG
AAACCCTTGATCGTACAGATGTTCCGTGCACTCGTCTTCTACGATCATATTCTACGATCA
TATTATGCATGATCCTTCCTAGCACTCTCTTTTCCTAGCACTCTCTTGCTCTTGGGCAAA
TCTTTTCCTCTTCTCTCCGGCAGGGTCGGGTATCGTCTTGGCAATAGTGGTCCACTGAGG
ATAGATACCGTCACCCAGGTAGTATCATTTGTCGTAGTTGTGGCCGTTGACAGTAAAGTT
CACCGGTGGGCTGTTGCCTTCGGCAAGCCT