Contig Data
morexGenes
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Map Locations of contig_1566564 (3890 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1566564

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13800 2 1498 bp AK365148 Available Available None





CDS Structure of MLOC_13800






Contig Sequence (3890 bp)

>contig_1566564 3890 assembly3_WGSMorex_rbca.fasta
GGGACGGAGGGAGTAGGAAATAAGTTTTTCATACGCAGGACCATAAGTAAAAGGAAGAAC
AATAACATGTCGGAAATTTTATGAACATCAAGCTTTTCATGTTCTAGTTGCCTGCAATTC
ATATTCTACTGGCCAAATAAAGTTTAAAACTGATGATACCAAAAATTGCCTCATGAAAAA
TGGAGCCTCACTACTGCAGAAATTGAAACCATAACAAAAAAAAACGTTTTAAGTATCATA
TATGGGATACGCATATATCATAGTTTATTCTTACATTAACAGCAATTGCTTTCAAAGCAG
CACAAGCTGATGGTAAGCTGGATGGAGCAACTTGCTTGCGGAGTGCGATGACAAGAACTT
CTGCGACGCCAATTTCTGCAAATTTCCGTGAATATCCATATACCTGCATCACAAGTCTGT
CAATCTCATCTCTTTGGATCCAAACTTCATTCATACAAGAAGGCCTAATTCCTTAACAGA
CAAATTATTAAGGTACATGAGTTTATAATGAAGTCATAAACTGAACATATTAAAATCAAA
TGCATCGGGATGCATCGGGTGATATATAAGTAAATTGCAGTGTCAACTTGCAAGCAAGAA
TGCAAGATGTACATGTGCTGATGACATTGAGAAACCAGAATGTTCAAAATATGAAACCAT
GTGATACCAAGTTAGCTACTATTATTTTTTGTGAACATTCTGTCTAGTATCTAACCATCA
CCAAAAGTTCATGTCAATATTTTCCTACGGATACGATCTTATGAGTTTCACCTCTAGCCT
NNNNNNNNNNNNNNNNNNNTAAAGGCTTTGTTGTTGTTGTTGTGGATACGAAATCTAACT
ACATTGAGACGTCCACCACTATTTATACATCATGCTGGATTGCAGTTAAAATAAAGCTAC
CAAATTTATATTTTAACACCTAATTTAGCCTACTATGCATCTCATACAGACAACACTTTA
TTATAACTCAATCAAATTTCCCCATATGGATTTATCTCCGGTAAACTAATTTCATGAGTA
TCAAATTCAAACCGAGTAACAAATGTGCAAACCAAAATGATGCACTTGTTAATGTAAAAT
TAGGGTAAGTATTGACATAATTCTACAAGCACATAGGACATACTTGAGAAGCCACCACTC
GGTTATCATCAGGTGTCAGAAGAACACGTATGGCATCATACACGCTTTGCACTTTACTAT
TCGATTTGTTCCTCATAACCTCCAGAATGAGTTCATCGACCTTCAAGTCCATGAAGGCAT
CTTTCACAACTTCATTGCCAGCAGATGCCATTGCCACGACACCAAAACCACCATCCAGTA
CATCTGTATTTTCCAATGCTCCATTCAAGATATCCATGACAATTTTGGGCCCTTGGCTTT
GCCTGAATTTCTCAGTACTCCCCACATCTACAGATTAGTTCATCCCCAAATGTCAGACAA
CGAAAAGAGAATGCTGTTCTGGTAGATGGCTAGATCATATGGAGAAAATTAAAACCCTCA
CATCTATCCTCTGGAGTCTGGAACGCAAAGTCAATAGAACATCCTCCTATCAAAGAACAT
TCGCGGAGGCAGCAACATACCACGGATCAGGGAGCTCAGCGCCTTCAAGCCCGAAGCAAG
CAGCCTCTCCTGCTTAACCCCAGCCGACGAGCACAGGGCGACGAGCGCCTCCACGCCGCC
GTTCCGCGCCGCCACGGCCGCATTCTCCGCCCCCTCGCCGGAGCACAGCTCGAGCAACTC
GTCGAGCAAAGGGGCCAGCCTATCAAGATCCTCCCCCGACCTGCCGCTGGAGGAGGCCTT
CAGCTCGTCCAGCACCCGCATCACCGGGTTCACCTCCTCCGCTGAGGCGTCCCCAGGCAC
GCGTCTGATGATCCCTGCAGGATGCGGTGAGAGGCTCAGTTCACCGCGTGCAAGAGAGAT
AGGAGATCTGAAGCCCTGGAGAGGATGGGGAGGAGTTCGTGAGTACCGGAGAGGTTGGCG
CCCTGGAGGGTGAGGGCGTCTACGGCGTCGGCGAGGGCCTCTTCGGGGTCCATTCCCAGG
TCTTCCATGTTCTCCCGGACCATGTCGTCAAAGGCCTCCTGCGAGATCGCGATCGCCATT
TCCTGCCCCGCTTGTTGTTTTTCGGTGCGGACTGCGGAGTGAACAGATGGAAGAGTGGGG
AGAAGAAGGGTTTGGTGTGGGGTTTCCGCTCCCCTCGGACAGATATCAGGGCAACTGGTC
ACGCCGCAACATGCGCCCACGTATCAGCCATCCAAACGAAATTCAACGCTTAAGATTGTC
CAAAGGCAAGACACCCCACACCTATCGAGGCAAAATGAATTTTTTTGACCCAAAAACCAA
ACTAATGCACACACTGAACTATGTTTGAATATTTTTCACCCACCTGACCCTTTTGTGTGA
CGCATTTGTCTTAGGCGTCACACTACACTGTGTGGCGCCCGATACTACGTTGTGTGACGT
CTGAGACCTAGTGTGACGCCTAAGGCATCGGCGCCACACTACACGGTGTGGCGCCTAAGA
CAAAGGCGTCACACAATGTAGTGTGACGCCCGACTGTCGGCGCCACACAAAAGTGTCAGC
TGAGTGAATTTTTTCCAAACATAGTTTAGTTTGTGAAATATTTTGGCTTTTGGGTTAAAT
TTGTTAATTTTGCCCACCTATCGACGCTCGCACACCTAGCACATCATCACAACAATAATA
AAAATAATAGTTGAGGTCACTCGAGGCCTGGCGCGAAGGGTTTCCTTGACGACTCATGTT
TTTTTGTCAGCGAGGTTGATCCTCGTCCAGATCTCGGCGCTCATCCTTCTGACTAACCTA
TCACTCAAAACCAGATCGATGCGACGAGAACATCACGATCCACCAAAAAACCCATACCTT
CTGCCCAAACCCAGTTCACAAGTTTGAGGTGGCACCAACTCTAGATCATCCAACACCTAA
TCCACCTCACTACCTCCCCCTTGGGTCGCCACCACGCGGTCGTAATACCCACTGCAAAGC
CGTCGAGAATCTTAGAGTTTCAGTGGGATGCCATGGCGATGGAGGTAGTTGAAGAACTGA
TGAAGAAAATGACGTCGTCGGTCGCGGAGAAGGGGGGAGGGGTGAAGTTAGGGAAGAAGG
GAGCGTGGAGTAAGCGGATAGATCCTCGGGCTATAGGTAAACTCATGTCAAATAGGCCAG
TGGTAGCGGAGATGTTGGAAAATACACCCAAGAGGGTCTAGTGCGCCATGCATGAGTTAC
ATACACATGCGGGGTGGTTTGAGGGTCCTCATTGGAAATGAACTTAGTGTTAGGAAACAT
AGTAAAAAACAAAACAAAAAACCGTCCTACAATCAATCAGGAACACTGTGAAGATGCAAT
GAACGGTTGGGATCGGGTTGTTATCGACTCCGAGTTGAAGCGAAAGAAGACGAGACGGTG
TAGATCGTTGATGAAGTTCCTTGAACCGTAGATGAACGATCTCACGAACCGCCCACAAAC
GATCTCTCGAACTGACGACCGAAAGCACGACCTCTCTACTTGGTTGCAAGCGTACGTTCT
TCATGGTCCGGCAGCGCTTCGCCGTCCAGAGCTTATCGTCGCCAGAGAATTAGAGTGAGG
AGATTAGAACCACACTAGACTTCTTATGAGGATTAGAGGAACTATGTCTAGCTCTAGTTA
GTCAACTATGACCAATTAAAACTAGAACTAGATGAACTAGAGGAGACTCCAGAACTTGTG
TAAACAATAGAGCCAATGCCTCAAGTATATATAGGCCCTGTTTGGAACCACTCAGATTAT
ATAATCCAGTTTTTATAATATCTGTCTCCAAATAGGACAGATTATGGTGTAGATTATAAA
AACTAGATGGTCAGATTATTAAAAACTCATAATCTACTCTACCCCAGCTA