Contig Data
morexGenes
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Map Locations of contig_1566528 (6809 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1566528

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13785 1 2154 bp AK361345 Available Available None
MLOC_13784 1 1023 bp MLOC_13784.1 Available Available None





CDS Structure of MLOC_13785






CDS Structure of MLOC_13784






Contig Sequence (6809 bp)

>contig_1566528 6809 assembly3_WGSMorex_rbca.fasta
CAAAATTCTTTTCTTAGGTTTGTTTAAAAATGGATGTATCAAAATACTAAAATGTGACTA
GATACATTCATATCTAGACAAACCTAAGACAAGAATTTTGGGACGGAGGGAGTATTAAGC
AAACAGTTCTTTGTCACAAACATAAGACTGTACTGACGTGTAAAAACAAAAACTTAAAAA
CAATATGTGTCTTTTGGGGCCCGTTGTTTTGGCCAGATCCACCTTACGACATTGGACCAT
GTCCATGAGCCACACATTCTAAGCCCGAAATATAGTGCCCACACCATTATTACTATAAAT
AATGCTCTTGTAACCATGAGCAGTGGAATGGACACCTGTCTTGCAACTGCGGTGGACTAT
TCTGCAGCTACAACGGGCAACCACATGGTGCCCATAACACACTTCCCCAGCAACTTTGGC
ATCATGCGGCCAAAATATGTGAAGCCAAACTAGCAGAAGCAGAGTCGATTAGTACTAACC
CTCAACACATCACTTTACTATGATCTTTAACTTTACTAGTATTAATCTTCACATGGAGGA
TTGGCGCTAGGAGTATCTTCAACAATCTTTGTATATTTGATTAGGATTGTTAAAAACTGG
AAATATAGCAACTTGGTCTAAAAATGACGCTCCAACAGTCTTTGTATAAGTGGTTTCCTT
ATAAATTATTTTTATAAAGCTTGTTATATTTACACTCATACTTGATATATTTGCAAAGTA
GGGAGGCATTTACTATAATTTTTAGCAGCCCAGTTTTTATGATCTCCTACATCCCTTTCT
TTCATTGACAAGTGGACCCCACCGTCCCTAGATTCATGCTTCCCTGGGCCTGGCACAAGT
CCCCACGTGTCATTGAGAGACTTGTTAAGTTTTATAGCAATGTTGTTGGAGCAAAAAACT
GTTGAAGTTGCTAAATCTTCTCTTTTCTTTTGATATACCCAGTTTGTAGCAAGTCAGAAT
AGCAATGCTGTTGGAGATGCTCTAAGAAAACAACAATGGCGACTAGCAAAATTTTAACTG
GCACTGTATGACTTTGACCTTTAACTTCACTATAATATAAATCTTCAAGGAAGATCGATG
CTAAAAAAACATGACCGCAACATCCATACACCAGTCACAAGTCACAGGGGGAAAACCTAA
CACATGTTACAGAATTCAATTGGATAGATAAATTAGAATTAAATATACACATGTGTGTGT
GCGCCCACACACATGTGCGTGTGTGCGTGTGCGCGTGTGAGAGAGAGAGCGAGAGATTAC
GAGTTCTTCTCAAAATTCACTTAATGTTAAACTAATATACAAATGATGATGGTGGTTGAT
TTCTAACTAGTGCAAAAAAGTTGGTGCCATACTTGAAAATTGGGAGTTGATTTTCACGGA
ATTTTGGCAAATTATTTGTGACATAGAATTCCATCTATATTGTATAGGTGATCCGCACTA
TAAACAATTGCTCATCTTTCCCTATGCTCTATTTTATCCATGAGATCAACATATTCGCCT
TGTCAAATTATAATTCACGATCCTTTCTTACTATATTTATGTTAATTAATATGTAAATTA
GGCATGCATATCGTGTGTATTGTGGCTCTAGGAAAACTACATAGTATGCATGCCATGTAC
CTACCAATTGGTACAACCAAATCTCTGAAATTGGTCAACATAATTGACACAACCTTAGTC
GTAGTACGATATTCGTACATCAGTACAGATCGAGGAGCTATATAATGAAGCAACAGAAAG
TTAGTAAGCCCAGAAGGAGAGAAACATTTCTGAGCTCATGTGTATCAACATCAGTCCATG
CATATTGAGCTACATGTACCGTGTGTAGGACTAAGAGGCTTCGGTAATCTGGTGACATGA
TATATCCCATAGCGCAGTAGTTCTACTGATGACGTGTGTAGTTTCAACATTCCAAGATGT
ATCAGTGACTAGTGATTCACCACAAGCACAGCGTGGTCCACAGCTAAAGAAAAGCAAGAA
ATGCATGTGAGGTGCCAACGGCTAGATGTTTCATATCCGTTGAGTTCCCTTCACTCTCTC
GCTTGGGTGCGATCCTCAGTAGCAAGTCATAGCACACTATCACCTCCTCACTAGCGACAT
TTCATCTCGAAGGTTTCTTGACGTTGTGGTTACACACACCTTGTGCGCCCTTGTGCCACG
ACAAGTAAGAATGCTGAATTGTCCATGTCTCATGTCTAACTCGTGAGTTGATACGACGTC
TTATATGTTTGTGTTTACCGACACTGGGATTAGATGCCACACTTTCTTAGCAGATCTTGC
CACAATTGTGTCGAACAATTTGTTTGCCATTTTTATTTTTGCTTGCCATGCATAAATTTA
TTAGAAAAGAGTTTTAAAATCAGGATATTGACCAATCAAGTTCTCTAGTTTCCACCACAT
AGAAGAGAACCGTAGTTGTGTGGTAGTAGAGTCACGGGGGCGTCTCTCTACCCGTCGGCA
ATCAAAAATCAAATCCAGAAGCTCACATCGACACACTAGCTCATGCGGATATTGGTGAGG
TTGGGCGGTTTATCTTACTCTCATTCTAGGGAGTCATTAGGAGATGTGATCCATGTTTTT
TTAACACAGTAAACCGCAGTTAAATGCATTTATAGTGGTTAAGTGGTGTGTATGTGCATA
TAAAAATAATCAGAAAAGTATTAAGCAAACCTTTTTTGTCACAAACATAAGACGGGACTG
GCGTGAAAAAACAAAAAACTTAGAAACAATATGTGTTCTTTGGGCTTTGTGGCCAGATCC
ACCTTACAACAATGGACCATGTTCCATGAGCCTCACATTCGTCTAAAATGTTGATTTCAG
CCCAAATGAAGTGTGCTCTTAGGTTCAGTTCACATTAGTCATCTTGTTTTATTTTTATCG
GTCATGTCAATTTTGTTTATCATTTTACTTTGGCTCTTTCGAAAGCGACTAATGTATTCG
ACCACTTATGAAATATTTTGCTTGATAATATGGTTGTATACATCATTCAGATGCAAAGGT
CGGAGATGATCCTTCTTTTTTTTTTTAAAAAGTGTGCCCACACCATTATTGCTACAGACA
ATATGAGCAATGGAGTGCCCCTAAAAAAAGGAATGGAAACATGTCTTGGAACGGTGGTGG
ACAATTCTGGGACTAAAACGGGTTTAGTCCTAACTTTTTTATGGTAATTTTAATTGTGAA
GGATGATAACTTTCTGTTTGGATGATAAGTTTCTTTTTAGAGATTGTTTTTCTTATGCCA
ACTTTAGTGTAAAAAACATCAGGGCGGTGTTAATTTGTGTGTGGCACTTATCATTTGGGT
TAACTTTACAATTAATCTCCACATGGAAGATTAGCGCTAAGAAAACAACAATAGTAACTA
GCAAATTCTTAACCAGCATTGTATGACTTTGGCCTTTAACTTCACTATAATATAAATCTC
CAAGGAAGATTGATGCTAAAAAAACATGACCACATCACCACAGCATCCATACACCAATTA
CCACGGGAGGGGAGGGGGGGGCTAACATATGTTACAGCATTCGGAGCTCAAAAGATACCA
GTCAGAGAGATCATGACCCCAAATCCATTCTCCTACACCACTAACGCCTTCCATCAGCTT
TTCTAGGCAGAGCAAACTGCATTGTAACTACGATTGCTCACTTGGGATAATGCATCCAGT
GGACACGATCCATTTCATCCACAAGAGGGTCTAGGAGTCGCTAGTAAGATCACCGTCCTC
ATTGTCACCGGTGGTATCTGTTTCCTTCACCTCCTGAATCATCTTGAGGACCTGCCACGC
AGTTGGTCGACTCTCTGGCGACGACCGGACACAAGCAGACGCAATGTCGACGATCATCGA
GAGTCGCTCGCTGTCGATACCTTCGTCTTCCCTCCCCGACAGAGCATATGTCTGGAGATT
GGTTGCCGCTAAGACCGAGTGCTCGAGTGGTGCCTTGCCGCTGAGGAGCTCAAGGAGAAG
GATTCCAAAAGCATAGACATCTGATTTGGGTGTGAGCCTTCTGTTGGACTTCATGTTTTC
TGGTGCTCTGTACGCGGCGTCGTCTTTGACTTCTGCTGATTCCAGAAGGAATGAAAGGCA
GTTGTCGGTGAGGCAAGCCTCGAAGTCTGAACCAAGCAAGACGTTGGAGGACTTGATGTT
TCCATGAACAAGCCGAGATGCTTGATGGATGTAGGCAAGGCCCTGTGCAACATCTTCTGC
TATCTTCAGGCATGAAGTCCAGTGCAGTGGTTTTCCCCGGGACGATCTTGAACCTGCAAT
CGATTTGAGTTTGTAAATGTGAAGCACAGCAGCAAAAGGTTCTAGTGCTATTAGCTACTT
ACTATGCTATGAATGCGTAAAGGCTATGCTGATATGCTGATATGTACCAACTTGTTGGAG
TTCTGTATAATATGCTCACAAGATAAGCTGTTCTTTGCCTGGAGTGCAGATAGATAGCAT
GTGCATGATCGGGTGGATGTTCATAACCAAAGAAAGCAACATATCAAACGAATAAACTTG
ATATCACTGCATTCTGAAAGGCTCTTATCAATTTTTAGGTTTCTACTGCTCTAAGAAAAG
GAAAACTCAAAATAGTGTACTGTGTTGATCCCAACAACCAGCTCACAGACATGAAGAATG
TACTGTGCTGTACTGTTGTTCCCAACAACCAGCATTGTGGAGGATCAACTCATCAAATTT
ACGTACTTCTATCGGAACCAAATCGAATGGTACTTCTACGATCTCACACATTATTACACA
ATTTATCATCCAAAACTGCAATCATAAAGCAGTTGTAACATTATGCTCTTGATGGTGATA
CCAAGTTCAGTTAAAAAAAACTGTGGAACATCACATGAGCAGTGGCTATTTGGCAATCAC
ATGTTCTTCCAATTTCCAATTTCCCTTTCTCAAATAAAGATCAGTGATAATTAGTAATGT
TTCTCTTTGATGACACCTCGACCCTTGCAAAGCTGATATCTTTATTCATTGTTTCCATTT
CATGAATTTACATTCGTGTTTGATCTATAACAGTGAACACATGTTACTGCAAGGGGTCCA
TTCCAGACAAAGGATGAGACCCTACTAATGATCAATCCCACACGATCTGGTCGCGTGCTA
GATTGGTGATCACTGAATGCACATCTGCTTGCTTTGTTTATTGACTTCGAGCAGAAAAGC
ACTAGCAATCAACCCATACAGCAGAAAGTACTGCACACATCGTTCCACCCAAAGGTACAC
TCATTCTGCTAGGCAGATTTTCACGTGGCAAGTCTTCTGAATTCCAATTCGTTCCCATGT
TATGATCAATAATGTATAGTGTAGAAAGTTAAAGTTGGCCTAGCCCACTCTACTGATAAT
TCACAAGAGTTTGCAGATTCAAGTATCATGGCAGCAACCAGAGATGTTCCTAGCAGGCTA
GCACTAAGTGTTAATTGCAATCCAAGAATCTACTTTGAGTAGCAACGAGTTGAGCAATGG
AGCTTACCGTGGATGAGAGAATGGAGGCTGCCGTTGGGCTGGTAGTCGTACACCAGCAGC
CGCTCCTCCTTGGCTTGAAAGAACGACCGCAGCGGCACGAGGTTCGGGTGCCGCAGCCGC
CCGATCACATCCATGTTCTGCTCGAAGGTCTCTGCCTCGGAGGCTGCCGGGCCGATCTTG
GCGGCGTCAAGCCTCTTGACGATGACTACGAGCCGGCCGTCGAGCACCGCCTTGTACGTC
GTCCCCACGCTCCCGCGGCCAAGCACCTCCGCCGACGCGCGCATCAGCTGCTCCAGACTG
TAGCTCGTGGCCTCGCCCGCGCAGAACGTCAGGCAGCCGCTCCGGCCCAGCCGGCGAGCC
TTCTCCTCCGGCATCATCATCGCCGCCGCCTCCTCGTCCGGCACGCACTCCACATAGCCA
ATGTCGGCGTTGTCCAGCTCCCTGCTGAGCTGCGACGCGGCCGCGCTCTTCTTGGGGCTT
GGGTATGCCGCCGTGCTGGGCCGCCTCCTCTTCTTGCCCCTCCTCGCGGCAATGATGGCG
CAAACGAGAAGCACTGCCAGGACAGCCGCGAGAGCAACGGCGACGGTCAACGCCGTCTTC
TTCTTCACTTTGTGCGCGCGCGCTGCCGACGACGAGCTCGGTAGGCCCTGGCGCTGCGGG
CCATCGCCAGTGACACCGGCGCTCTGCGCGGGGGGAGTGGCGGAGCCGCTCGTGCCATCG
TCGGGGAAGAAGACGAGGGGGGAGCCGCGGCACTCGCGGCGGACGACCTCGCCGCAGAGG
CCGGGGTTCCCGGCGAACGCGTCGGCGCCCATGAGCGCCATGGATGCGGTAACGGGCACG
GGGCCGGAGAAGTCGTTGTACGAGACATTCAGCTGCTTCAGCGACGACTGGTTCCAGGCG
GGGACGGAGCCATTGAAGTGGTTGGAGTCGAGGCGCAGGGCCGTGAGATGCGGGAAGGCG
GCCTCGATGCCGGGCGGGAGCGCGCCGGAGAACCGGTTCCCGGAGAGGTCGATGGAGCGG
AGGCGGCGCAGCGAGGCGAGCGAGGCCGGGAACGGGCCGGAGAAGCGGTTGCCGGCGAGG
AAGAGCGCCTTGAGGTTGCCGAGCGCGGAGAGGTCGGGGACGGGCCCGTGGAGCGCGTTG
GACTTGAGGCTGAGCACGCGCAGCCCGGCGAGGCCCGAGATCGTGTCCGGCGGGAAGGTG
CCGTTGAGGCCGGCCTGCTCGAGCACGAGGTGCGTGATCCCCGCCGCGCCGCTGCAGGTC
ACGCCCGGGTGCGCGCAGGGGGTGGCGGCGAGGGGGAACCGCAGGGGCGCCGTCCGGGCG
CGCCCGGGCGGGAGGGGGCGCCACCAGCG