Map Locations of contig_1566482 (5247 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1566482

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13771 5 1769 bp AK249432.1 Available Available None





CDS Structure of MLOC_13771






Contig Sequence (5247 bp)

>contig_1566482 5247 assembly3_WGSMorex_rbca.fasta
TGAGATGGTTTGGGCATATTCAGCATGAGTCTTGAGAAGCTCCAGTTCATAGTGATCGGC
TAAAACATGCCGATAATGTCAAAAGAGGCTGGGGGTAGACCGAACTTGAAATGGAAAGAG
TTTGTAAAGAGAGATCTGAAGGACTAGAGAATCACTAAAGAACTAGCCATGGACAAGGGT
ACGTGGAAGCTTGGTATCCATGTGACAGAATCATGAGTTGGCCGGGATATCTGATGGGTT
TCACCTCTGACCTACCCCAACTTGTTTGCGACTACATGCTTTGTTCTTTTTTAATTGTGA
AGTAATTAAGTTATTATATAATTAGTAGTTGGTATATACCTACCTACTGGGTAGTACTAG
ACGTCCATACCTATCACTGACAATTCCTATGTAATCTAGACTCTAGAGAACGATGATGCT
AATCTCAAACTTGCTAGTTGCTAACCAACTGAGCGAGACCATTCAATAACAGACACACTG
GTGGTACACAACCATTTTCTAAACTAAAGGCAGTAGAGTATCATGCATCTTGTCAATATC
AGGCCAGATAGTGGTTTGTCATCCTAAGCAGTGTCTTTTCTACACCCTCATCAGCCCTTC
CCTTTCTTGAAAGCAACACCTCTGGCCTTTAATCTCTTGGCAGACGGAACGAGGTAAAGA
ATAGAATTAAGAAATATAGCCTTCTTTCCCTCAAGAAAACAAGAAAGAAATCCAGTCTTC
TTGGAACAGGATTCGGTTGAAGGGAGCTGGTTTATTAAGAATAGAGTCTAGGTGAAGGAG
GACTCTTAACTGCATCAGAAATTGTCTACCATATTTAGTTTTATTCAAAATGGTCAATGG
CCTACTCAGATTATAAAGATACACATAATCGAAACAGGCTTTCACCCTGCTTTACAGATA
CACATGTCTATTTAAATTGAATAAATTTCACAAAGTTACATGTCTTGTAATTGAAAGGGG
TGCCCCTGTCTATTTCTAAAAAAAAAAGAGTGAAAACCTATCCCAGAAGTACGGATTTGA
GGATCAATCTCACAAAAGTACAGATTTAGGGAGCAAGTATATCACAGAACTTTTCCTAAA
GAAGTATCACAGAACTACAGTACATTTTAAGAAACAAAATGGCCTTTTTCAAGAGATCAA
AGTTGAAAACAACCAACCAGTTTCAGAGTTCATGGTTGAAAAGTGAACTTGTACAATAGC
TCACGTTTGAGAAGTGGACATTCTTCAAAACCTGCCTAGTCACCGAAAATGAAATAAAAA
TGTCAATGAATTTGAAAGAAGCGAGAGAGAGACATGCATGTAAATCAGGGTGGTGGATAA
TATATTCACAGCAGTTTCGTTGTGGTTGGTTGGCTGATGAGGAAGTCCATAAATCTGACT
TGTAGCACTACTGGACAGTGCTGCACTGCATTGAATGGCAATTAATGGTGTGGGTGAGCG
CCCTTGAATGAATGTACACAATAGCTCTCTCAATTCCACGGTGCTGCTACCCTCTACATA
AACGAGTGAAATGCATTGGGCAAGGTTGCGAGGTGGAGAAATCAGAGACCACGAGACAGA
AGGCAAGTACGCTACGCACAGTCAGAGGTGGCTGGGTGGAAAAGACAAGGAAGAAAAACA
AGGGGCGCTCTTTGGTTTCAATGGGTTTGATCAGCGGAGGGGTGTTCTTCAAGATCTTGG
CGTTCCTCTGCTTCATCAGATTATCTCAAGGTACATTCCTTCTACTTGAGCTTATCTATA
TGCTTCTCAAAACTGCACGGTGAACCTTTCATTTCTCCCCTAGGAAAAAGCTCAATGGTT
TTTGCCCGGCTCAAAAAATAAATAAATTCTCAATGGTTCATGGTTGGAGTTTGACTTTGA
TCCCACGATGTTCACTTCCTTTGTTTCTGCCGATAAGCTTGTTGTTACACCCACCATGGT
TATTATCTAGAGATTTTGAATTCTGCTCTGGAGCATGGGCCTTTATTTACATATTTTGGA
TACATTCAGGCCACTTGTCATCTATTTCAACTTATCCTACACTCTGATTTTGATACTGCT
TTCTTAGTCCTGAAGTGGCACTCTGTCATTATAAGAATCTTTGGTGTGTGATGGTACATA
AGAAAGCGCCATTTCCAAGTAAAAGGCTGGAAAAACAGGGTGTGGAATCTGGAAAAGATG
GGCACCTTCTTTTCACAACCTGTAGAATTATTTATAACCAGAAGAAATCTGATGAAAAAG
AGTAAGAGTTTAGCATAACCAGGTTGAGGCATCCTTATATATCAAGATAGAAGAAGAAAA
CTGATTGAGATAATAACCTGAAACCAAGCAGCTTCAGGCAATAATATCGAACACTTTAAC
TTGCAGGAAGAAACCATTCCGCATCACCGGATCTCCCTCCCCTCCGGAAGGCAAGCAGTT
TCTCCAAAATCCAGCATGAGGCGTATGACTACATCATTGTCGGCGGAGGCACGGCCGGAT
GCCCATTGGCCGCAACGCTGTCGAAGAAGTACAAGGTGCTCTTGCTTGAGAGAGGTGGAT
CTCCATATGGCAACCGCAACATCTCATACCTTGAGAACTTCCACATTTGCTTGACCGATC
AATCGAAGAATTCCCCATCTCAGGGATTCATCTCCACTGATGGTGTCATCAATGCCCGAG
CAAAGGTTCTAGGTGGAGGAACATGTATCAATGCCGGCTTCTACAGCCGAGCCAACCGAA
GGTACACAATGTGACATGTTTTCAGTTATCTAACCTAACATAAGATCCAATTACTTTGCA
AATAAACCTAATCCAAAGTCAAACAAGTAGCTAGTTTAATAGCCTGAGTAGGAAACATGG
TTGATCAGATATAGCAGGATATTTCACAGCTACCCAAGCTGAAGCCTCACCTGTAGGTGT
TTTAGTACGTCACATTCACAAACCAGTGTTCGTATCTTCTGTCTTAAGCAAAGATTACAC
TAGTATCAACACTAAAGAGTCAACAAAATGGCTGATGGGAGAAGCCAACGACCTTAGAAG
CCAGTTATAATTGCCAGGCCAATAGGTAGCCATAGAAGTGCAGTACTACAAAACCTTTTC
AGCCCCATAACTGAACCTGGTCGTGAAATACCTTATGCTTTGACTGGATGTTTTTTTACA
TGGATTTTCAATAGCTTTTAGTTGAGTATCATAGTGGTAGAATTGATTTTGAAGTTGCAG
GAAAGATATCAGACGCATTAATGGTCGCTCAACAACATTAGAGGAATGTATCTTGGTAGT
ACAAAGGAGTAGTTTGTTAGGAGGGAAGCCAGTAAGGCTATCTGACTTTCTTATGCGAGT
TTATATAGCTGCACACCGATGCATACTATGGAGTGGTGAAGGACTGAAAATGAGATGGAA
GAAAAATTGCAAAAGATCACTAATACATTATTGTTTGTTGGTAACATAGAATGATGAATA
GCCAAATAGCCGAATTCCACTAAGATTTGCGGTAAGTTCTGAAAGGCTTAAAATGTCGTG
GCAGAATTCATTAACCATTGCAGTATCTGAGTTTTTTTTTAAACATATGCAGTGCCAAAC
TAGAAAAATATATGCCAATTATTACAGAATCATTAGGAATATAAGAAGGAAATTGCTCAC
ATAAGCATATGACCAACTATAACTATAAGATAGCGTACAATCTGGTTTCAATAAGTTGGG
CAACTGTGCCTATTAGACTGAACCTATCATGTCAAAAATTGCTATTAGTAAGGCTTTATA
AGTTTGTAACCAATTATAATGTGCTTGCCCCTGCAGATTTGTGCAGGATGCAGGATGGGA
TGAAGAGTTGGTGAATCAGTCCTACCCCTGGGTCGAAGAGAGGATTGTTTATTGGCCAAA
GATTGCGCCTTGGCAAGCCGCCCTTCGTGATGGTCTGCTTGAAGCAGGGGTATCGCCTTA
CAATGGATATACCTATGACCATCTCTTTGGAACCAAAGTTGGGGGAACCATCTTTGATGA
GGCTGGGTACCGGCACACTGCTGCTGACCTCTTAGCTGCTGCAAATCCTAACAACCTCAA
AGTGCTGCTTCATGCTAGTGTGAACAAAATAATGTTCAAAACGAGACATGGTAAGCCGAT
AATCTAAGTAAGGCATAGCTCTTATAATCACAAAAAAGTTGCATGGTAGAAAAGAACCAG
CCACCCAGTGAGAAATGTGGTAACTGAAGATCACACAAATTTCAGGAAATTGTTTCACAA
AATTTTAGTACAAATTTAACTTATTTGTAGAAAAAGGAAACTGAACATGAAAATGGTGTT
TTGAGGATTCAAACCCATGGGTCCATGGCGTCCACTTATAAAGCATGATGAGCACATGCG
CCTTTAAATGGTGACTGTGTTTGCCAATAATTTTCTTCTGGCTGAATGTAGTTAGTCTCG
GTCCATTGAGAAGTCCAGTTGCCAGCACCGGACATACAATTTCCTCCATAATCTGTATAT
TCACTTCGATAAGAAGGAAGCTAGGAAAACACATACTTCAAACAAAAACAGTAGGTACTG
CACAATCATTTTGTTATAGTAACCTCATCTCTTGCACAGGACATCAAAAACAGAGTGCTA
TTGGGGTTCAATTTACGGATGAGAATGGCGGGCACCATCAAGCCTTTCTCAGCCAGAAGA
GAGGCAGTGAGATCATTGTCTCTGCCGGCGCAATTGGAAGCCCCCAGCTGTTATTGATCA
GCGGCATTGGACCAAAGAGTGAACTTAAGAAGCATAACATTCCTATAGTTCTTCACAACG
AACACGTGGGTAAAGGGATGTCAGACAACCCACTGAGCTCCGTATTTATACCCACCAAGG
ATCCCCCAAAGCAATCTCTTATTGAGACTGTTGGAATAACTGATGATGGTGTGTTTATCG
AAGCCAGCAGCGGTTTTGGCCAGACAGGGGAGAGCATCCACTGCCACCATGGAATCATGT
CTGCTGAGGTTTGGCATCAATCAAGATTGTTACCTGAAATAAAACTGAAGGACTTCATTA
CAGTTTACAAGTACCATGGTGCATTTCAGTTCACAGAAGTATCATGATAGTGCATTTCAG
TTTACAAAAGTATCATGGTGCATCACAAAAGCTTTTGCGCAAAACAATACATCTTGCACC
AGCAATCTATAAAAGTATGCACCCTAAAATGGGCTTTTTGGAGCCAACTTCTCAAGCTTT
ATCTGTTAAGCTTTAGTTTGCAGGTTCCCAAGATAAGCATATAGACACATTGGAAATATA
TACTAACATGTACTCCCTCCGTTCCTA