Contig Data
morexGenes
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Map Locations of contig_1566469 (4363 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1566469

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13768 1 1780 bp MLOC_13768.1 Available Available LOC_Os06g08140.1, FRAME:-1, EVALUE:0.0, 13106.m00851 protein protein phosphatase 2C, putative, expressed





CDS Structure of MLOC_13768






Contig Sequence (4363 bp)

>contig_1566469 4363 assembly3_WGSMorex_rbca.fasta
CGGCGCGCGGTGCGGAAGCGGCGGCTAGGTCAAGAACCTTGCTCTGATACCATGTTGAAC
AGGAGAATAGGGATTGATAGAATAGTTGTTGTATTGCTTGAGCCCCGTGGACATATATAT
AAAAGTACATGATCATTTTGGAGTACAAGTAAGGGAGAAACAAATTCTAGTCTATCCATG
CTTTCCAAAACAATCACGTTACTCAACATGTATTTTTATACTTGGCAAATGGATATTCCT
CTCACAAGAGACATATAAAATTTCAGTTGCACTGATAGGCCCCGACAATCTTATTTACAG
ATGAAAACAGGGAAATGTATAATGGTACAACAAAGGCACACAGCCTCTCCTCCAGGACAT
GTCTAGTTCCAGCAGCTAAGAAATGCTCACAAGCGTGAGCCCACATGTTCGTTGGCTTAA
TTACCAACAAGAATAACAGCCACTGCCTCAACAACAATGGGGTAACATAACAACAACAGT
GAAGCACCGACACGACTACATACAATTAGAACTCAGCAAGCACCGGCACGGCACCCGGTC
ACGGCGAAGGAAGTGCGCCGTCATTGGCTCCCTAGGAGTATCCTGAGGCTGTTGAGCCCG
TCGGCCGAAATGCTCCGCGCCACCCTGCGGGGCTGGCTCGCCCTGATCTGAGGAGGCGCC
ACCAGGTGGAATGAGACCAGCACTGCTGTTAAATTGTCCGTGGCGCCCCGTCGTATCGCC
TCCTCGACGATCTCCCTGCAGCAGAGCTTCACGTCGTTGTGCTCCTGGAGACGCCGCCGG
GCAAAGTCCACGGCGTTTTGGTTCGAGAAGACGTCCCACAGCCCGTCACTGCCGATCACC
AGGAACTCGTCGTCCTTGGTCAGCGTGGTCAGCTTGATCTCTGGCTCGGCGCTCAGGGGG
CCTCCCCCGGGCCTGCTGGCCTCCTTCATTCCCTCGAGGTGCCAGTCGCCGAGGGCTCTG
GTGACTCCTAGTAGACCGTTCAGGTAGCCGTCGTCCACGTAGCCACCGAGAGACTCTACG
CGCAGCTTTTCACTGAGGCTGCAGGGCCTGTGGTCCATCGACATCTCCATCGCAATGCCA
CACCGGGAAAGTACTGCTCTGCAGTCACCAGCATTCGCGACCAGAAGGGACCTGCAGCAG
ACATAATAACGATCAGTATTGGTTATTATTAGGAAAGTCACCAGTGCAGTGAAATTTACA
GGCATGGAAAACCAGCAAAAGCTTATGACCTTAATGCTGGACAAATGTTTGCAATATTAT
GCCTTTAGAACTATCTCCAGGGATAAATAAGGATGCATATATATAAATCATATGCTTGGG
ATGAAGATTCAAAGTATGCGGAATCTCTCTAGTTTATCATAGTTGCAGTTTGCAGAACAC
TCAAGGTTGCAGCTCAAAAACAGTATATATAAAGTTTAAACTTCAACAATATCATGATGC
CATTTTGATGCATTTTCATTGTATGTTCGTATATAAATGCTCCTTGTGTTCCATCCCATT
TCATAGATGCTGAACAATGGGACTTCCTAGGCAAAGGAAGTGTATTGCAGCTTATGGTTT
TAATGACCGGCTCAATCAAAGATGATATAGAAAGGAGAACCACAGTTATATTTGGCAGAA
AAGTACCTTCCAAAAATCATTGCTGTAAGTGCCGTTGTGCCGGACGACAGAGCTCTCTGG
TGAGAGCATTTATCCGCAAACTGACTATCTATGTGCACAAAGGATCTGCTCACAACTTTC
TCAAGCTCCAGAGGAAAATCGGCATCTTCCACAATGACCCTCGGCAGATTATCGCAAACA
AAATGGGCAGCATCTTTTCCACCATGCCCATCAAAGACCTAGAAAATGAGAAATGCAAAA
ACTTGGTTACAAAAACACAATACCTCGTGATTCATATAAACGGTGAACAGCTAAAATGGT
AACCACATGTCACTACACTTCCTTACTGTTAATAAGAACTGTAGTCTTAAAGTACTGCAG
TACAACAATTACACTCAGAGAACCACAGTGTGTACTGCATTCTGTGCATAAACAGTGAAG
AGAACTTTATTGGATGATGGCATGCCAGAATGTAGATCAAGGTTCAAGGATGAAGCATAG
GATTGACTGTGGATAGTTCTTGATGATACAGAGGATCTGCCCATACATACTTTATAGAAG
TTTCCTGGTACACAAATACAACTAAAGAGTTTCTACTATTGGGTGGGTACATGGATCAAT
TCTGCAAAAAACTTTCCTTTTCATGTGGGAAATTGCGGTCTAGGTATAATGTGGGTTATA
CACTAGTTGTAAATTTGAATAGAGTTGATTTCTGTGTCAAAATGAGGAAAAAGTGAAAAA
GAGAAAGCATGTACATACCCCATAAAAGGAAACAACTTCTTTATCCACTGTTGGATAACC
AAAGTTTTTAGCTAGGTCGGCAATACACACATGGGTATCTTCCATGTACTGGCGGCTTCC
AATATCTGACCAACCGCCTGATCTAACACTTGGAAGGAAATTGCTGAAGTTACTCTGCTT
GAAATCGGCAGTTGTGGTGTTCTCACAAACACTCTCCATCTGCATGTTAAAAAACACATT
AGCATAGCTAAGAATGTAAGTAAAGTAGGCGAACCCTATAACTGAGAGCAGAAATAATAG
GAAATAATTCCGATGAAAAAGATGAAGCACCACTTTGCGTAGTGATGGCAACCCATCCCA
TGACAGCAGTAAGCAACATTCATTATACAATCAGGTCTATCACTGACATAGTGCAGGCAC
TTCGAAGGGAGCAATCAACATGGATCATTGCAAGAATAACATGTCGTTCACTCGGCACAG
CATTAGGGCCATGTTTGTTTCACTTGAGCCTTGGAGAGGAAAAGGTACCAGGTACTCCAA
TGCACAAGGAGTACTAATTGTTCATGTTTGCTAGGTACTAGTACAATGGTCTGAAATTAG
GACCTTGCCCCCTGCCTGTGGCAGTAAATCTCATCATCACAATTATCTAGCAAATGATTG
GGCACAGCGTGTACGCCCAGTACAGTTACAGAGTAGTAGTATTAGTACTAGTACTACTAC
CGACGAAGAAATGCGGTGGATGGACAAACAACAAGCTGTCACTTCTCACCAGAAATCTCC
TACCGAACGCAGGGAATTCTGACCTGTTGAACGATTCAAGGAGACTTTCCTCCAGATTTC
AAGAAACGGGAGCACCAAACGCGTGCGCGCAAAGCAAGCACAGCCTGGTTCATGTCCTCT
TCCAGCTCAATCCGCCCCTTTCGCGCCATGGTGGAACACAGCTCGGGACAGAAACCATCA
AGTTCGCCGAGCACGACGAGATTCACCTAGTCTAGCAAGGAAGCGCGCTCCCGAAATCGA
ATCTTACACTGCAGAGAGAGGGGGGAGAGAGAGACGGAGTGCGGTACCCACATGAGGCGA
GGGGAGCTCGGCGGGCTTCTGCGCTCCGGCGTGGCTAGAATCGGGCCTCCCGGCGTCGTC
CGCGCGCATGCCGGCCTGCACTCCGGCGTTTCTTGGCGCAACTGGCGCTGTGGTGGAGTG
CTGGTGGGAAGATCGGGCACGAGGAGGAAAAGCGGAGAGGGGGAGGGGAGAAGAATAATA
CGGGCGGGTGGGTGCGGAGTAGGAGGGAGGGGGAAGAGGAATCCGAGGAGGAGGGCAACA
GGGAAAGAAAGGAGATGCTTTGGGAATATCTGTGGGCAAAGAAATCGATCCGGGGAGGGA
AAGGAAGAAGAAGAAGGTTGAGGTGGTGGTTGTTTGTTGGAGCTCGATTTTTTTATGGGG
GCAGAGAGCAGAGAGTGTGGGGAGAGAGAGAGTGTGTGTGGGGGGAGGAAGAAGAGAAAG
GCACGTGGTGCACGGGCGTCACAAGTGACGCTGATTGGATGGGCTTTGGAGATTTATTCG
TTTGTTACATTTGTGGATATTTATTTTTTGAATCCTAGTTCTTTAGGGTCCGATTCATTA
AAAATGTCGAAGAGAATTGTCTGGTTAATAAATGGAAAACCGGTCTAAAATCGTCATAAT
ACGCCTGCAAAACAAGGCACACATGGCGATCTGACAACCTACAGAAGAACGCGCACACGT
CGCCAAGGAGAAGAGCGTCGTCGAGGTTGCAATCCGGCGTCATCGTCATCACACCTCCGT
GAGGGCGACTCCGACTTCACCATCGACGACCATCGATGTAGCCTCCGTCGCAGATGAGCG
CAGAGGCCTGCGTCGGTCAACGCCAAATAGTCCACAACACGCGTCGGCGAGTGATATGTC
TCAAACGTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTTT
TATATGCATTTATATGCTGTTTTATATTATTTTTGAGACTAAC