morexGenes - Barley RNA-seq Database

Contig contig_1566423
Source Contig contig_1566423
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1566423 (7513 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_1566423

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_13750	1	927 bp	MLOC_13750.1	Available	Available	None
MLOC_13749	5	4006 bp	MLOC_13749.4	Available	Available	LOC_Os02g12400.1, FRAME:+2, EVALUE:0.0, 13102.m01343 protein receptor-like protein kinase precursor, putative, expressed
CDS Structure of MLOC_13750

CDS Structure of MLOC_13749

Contig Sequence (7513 bp)

>contig_1566423 7513 assembly3_WGSMorex_rbca.fasta
TTTGAGCTAACTTCTATATAATGATGGTGTTTGTGGTATGGCAGCCCGACTGTTTTATTC
AATGAAGTTTTGAATATGCTCAATTGAACATGTCCCCTTATGTTAATTTCAAAGAAAGGC
TAGACAGTAGACAGTGGACAGTAATAGTACTGCTGTTCGTAAATACATGACTTCAGTGGT
GGAGCTATACACGAACAAAATAGTGGTATGGCCCGTCCAGCATAAGCCCAAAACAGCATA
AGGGTAAAAGTTTTGGGCTCTACTTGGCCTGGTCCGCCCAACATAATCCGTGCAGCCCTG
CTGTTGCATGACTTCATAGAAAGCGAGCAGTCGAACTTTTCTAACCAATATATAAACAAC
TATTTAGACATGTAACACCAAAACAGTATGATGTGCTTTGTTATGAATAATACTAGTTTC
ATCAGTATACCTGATAACTTTTACTAATATACAAACAAAAAGTTACAGCCAAAGATGTAT
GTTGGAGGCTGTGCAAATTTTGAAAATGTAATCCATTTCCAAGCAGATAAAGTGAACTAT
TTTAGTTGGTTTGACCTTTTTGGTGCCCGTGTTACATCTAAATGAATATTGTTACCTCCC
TTTCCTAATGTGAGTGACATCAGATATTCACCTCCACAGTTGGATTATATTCCTTATCAC
CTATATTCCTGGTCTTGCCTGGAAGTGAAGGACAAGAGCTGATTGTATTTTGGGTACTTT
GCATGTGTTTATATTATGCAGCCGGATGAAGATGAAGAGGATCAGGATGAAAGGCATGAT
GGCCCTGATTCTGACATGGAAATGGATTATCACACACCTTTGGAAGACTCAGCAAGGTAT
TTATTTATGTTGTTCTGTGAGATGGTATTTATTCCTGTCTCATTGTTCCATCAGTTCTGA
TGGCTATCCTGTGTGCACCTTGTGACAATCTTTTGTTATAGGAGAATCACTATTCAAGGT
GCAAGAGTTAAGAGAGAATCAGCTGGAGCTGAAACAAAAGATCAGGTACTTCACCTCATC
ATTTTTAGTCTTTATGTACAGATTAGTGATTTGTCCTTTTTCATGATCCACCATTTTGTT
CACAGATGTGTCGTCCTTTTTCTTACCACCTGGTCCTTGATAATTCTTTTCCAAAATAGA
GTGAAAATTGCTTTCTCACCATGTAATAGATGGTGTTGGTGGAGTATTTCTGCTTAGATG
CATTGCAAAATGTCCACCGACCATTGTTTGCTCCTCCGATGTGCATGTAAACTGAAGGGT
AGCAAAGAGTGTCTTGTAATTTTGTTAAACTTCCATGGTTGTATGCAACTTGTTTGTATT
CCTTGGTGCCATGCATTTATGCTAAATGTGTTTTTTTACCCTCTGCAGGATGGTAGCAGA
GTAACAGGTGAACATAGAGGACCAGAACCTATGGCAGAAGACATCGGTCCATCTAAGCAA
GCTCATGTAAGCCGGCCTCCCTTTCTGTTTGTGAACTGTCGTATAAGATAGATCCCTAGT
GTACACTGCCCATGGCTAGGCTGATCTAACCAAAGATGCATTTTCTTGTTGTCCATGATC
CTCGTCGCCTACAGCTCGATGCTAATGCCATGGCTGTCGATGAGCCGGGAAATGTCAAGA
TTGAGTCAGGAAGCTCTAGTAAGTTGCCGGACCCACCAGCCATCTACCAGAAGCCATGAT
TGTAAGCATTCGGACCGTGCGTGTGTTTTGACAGTAAAAAGACGAAGTGATGAGTGGTAG
TCTCGAGTGTCTAACCCATGTATACATGCAGCATGGATTATTAAGCTGTAATATGTATAG
TCGATTAAATGAGCCGTGAGGCAGAATTTTCTTGGCTACCTGCAACTTGTCTCCCAGCTT
TCTACTTTGGCGATCTTCTACCTGGTAGATTCGTTGATAATTGGTGCATTTTCTGTCGGT
ACCCTGGATTTGTCACAAGGCAATGTTTTTCTCTGGCTCGCCTTGTCTTGTCGTAATCTT
CAAAGGAATAGTATGTGCTAGTGCATTTTTATATGGTTGTGCATAGAAAAATAAAATAAG
AATCAACATTCTGTATGCTCTAGCTACATAAATAAATAGTTGCTGCTGTATATTAGCTCT
TGGTTCCTTGTTTTGATATTGTCTTCAGTAATTCTTAGTTGACATAGATTTAGCCGACTA
GTGAAGCGCTGGCCGTAGTTTAGCATGGCATGATGAGCCAGCACTTGAAGGAGAAGACGG
CTGTAGGAGTGGTGTGGGCAATGCTACACATACATAACTTTACATGGGTTTTATAAACAG
GTGTGTTTTGATTGGAGATTAAGGGGGATGAGGACCCCACCCCTTGAAAATCAGGGGGGA
GTGGTTAGTTATTAGAAAGAAAGAATCCTAGTCAGCGTGTAACCTTACATAACTCTTTGT
ATGTCTAGCATTTTTGGGTGTGGGCAGGGTTAGTGTGAACGGGAGACATTGTCAAAAAGG
TCAGGCGCCAAAAAGGTCAGGCGCGCAAAAACTTTTGCCGTTGCAAACAGACAACCCAAA
TAGCGGCCGCCAGCTTTTCATATCACTGACATCAACCACTCATGGCTCATTGACCCGTAG
TCTTGAGAGAAAGGAAACAAGCGACGGATCGCATCACGCTGCGGGTGGCCCCCTCCCAAA
ATAATTCAACGTCCAGTTGCCAAACGACGAGGACGACGCGTCGCTGGTGGCCACAGTTTG
TTTATACGCAACACTCACCCAGGCCAAACCTCTCTACCTCTACCTCTACCGTACGTACGT
ATGCTCTCTGCCGCGTCCAGTCCACACTCCACAATCGCTCTGCTTGCTGCAGTACCGTCT
GCCGGGGCAGCAATGGCAATGGCAGCACTGTCCCTCCTCCTCCTCCTTGTCTTCCTCCTC
GCGTGCTCCGTCGCCACTCACGCCCTGCACGACGCATCCGAGCCCGCTGCCGCTGCCGCT
AGCGTCGCGGATTACAACGCGCTGCTCTCCTTCAGGTCGCTCGTGAGGGGCGACCCGTCG
CGGGCGCTGGCGTCATGGACGAGCAGCGCCCACAACGAGCCCGCGCCACCGCCGTGCCAG
TGGCGCGGCGTGTCCTGCGGCACGAGGGGCCGCGGCCGCGGCCGCGTCGTGGCGCTGGAC
CTCCCCAACCTCGGCCTCCTCGGCGCGCTCAGCCCGGCGCTGTCCAACCTCACGCACCTG
AGGCGGCTCCACCTCCCCGGCAACCGCCTGCACGGCGCCCTGCCGCCGGAGCTCGGCCGC
CTGCGCGAGCTCAGCCACCTCAACCTCAGCGACAACGCCATCGGGGGCCGCCTCCCGCCG
TCGCTCTCCCGGTGCAGGCGGCTCAGGACCGTCCTGCTCCACGCCAACAAGCTGCAGGGG
CTCATCCCACCGGAGCTGGTCGGCTCGCTTCGGAACCTCGAGGTGCTCGACCTCGGCCAG
AACAGGCTCACAGGAGGCATCCCTTCCGGCATCGCCAGCCTCGTCAACCTCAGGCTGCTG
GTCCTAGAGTTCAACAACCTGACAGGCGAGATCCCGTGGCAGGTCGGCAGCCTCGCCAAC
CTCGTCGGCCTCGCCCTTGCGTCCAACCAGCTCTCAGGCTCCATCCCCGCCTCGCTGGGG
AACCTCTCGGCGCTGACCGCCCTCACCGCCTTTTCGAACCGGCTGTCGGGGAGCATGCCC
TCCACATTACAGGGCCTGTCATCCCTCACCACGCTCCATCTGGAAGACAACAGCCTCGGA
GGAACCATACCTTCCTGGCTAGGGAACCTCTTGTCGCTGGCATCCTTAAACCTCCAGAGC
AATGGCTTTGTGGGGCGCATCCCGGAGTCCATAGGGAACCTCCGGTTGCTTACCGCCGTT
TCGTTCTCGGAGAACAAGCTTGTCGGCAAGATACCTGACGCCATCGGGAACCTCCATGCC
CTCGCTGAGCTTTACCTGGACAACAATGAGCTACAAGGCCCTCTGCCACCCTCAGTCTTC
AACCTCTCCTCCCTTGAGATGCTCAACATCCAACACAACAACCTCACCGGGGGATTTCCG
CCCGACATCGGGAACACGATGACGAGCCTCCAGTACTTTCTTGTGTCTGATAACCAGTTT
CATGGTGTGATCCCTCCATCCTTGTGCAATGCCTCCATGCTTCAGATGGTTCAGACGGTA
AACAACTTCCTGTCGGGAACGATCCCGCAGTGCCTGGGGGCTCGCCAGGAGATGCTGTCG
GTGGTGAACTTTGCGTGGAATCAGCTTGAAGCAACCAACGATGCTGAATGGGGCTTCCTT
ACGGCTCTGACCAACTGCAGCAATATGATATTGGTGGATGTTAGTGAAAACAAGCTCCAA
GGCATGCTACCGAAATCAATCGGCAATTTGTCGACACAGATGGAATTTCTTGGCATTGCA
TACAACAGCATATCAGGAACGATAACTGAAGCGATAGGGAACTTCATCAACTTGGATGAA
CTTGACATGGAGAATAATCTTCTCGAGGGCACCATCCCAGCATCTCTCGGCAAGCTTACG
AAGTTGAATCGGTTGTCTCTGTCAAATAACAACTTGTCAGGATCCATCCCAGTGGCTGTT
GGAAATCTTACAAAGCTTACAACCCTTCTGCTTAGTACCAATGCGCTCAGTGGTGCCATA
CCTTCTGCTCTCAGCAACTGTCCTTTAGAGCAGCTGGATCTTTCTTACAACAATCTTTCC
GGCCCAACGCCTAAGGAGTTTTTCCTCATCTCAAGCTTGTCGAGTACCATGTATCTTGCA
CATAATTCACTGACTGGGACTTTGCCTTCAGAAGTGGGAAATCTCAGGAATCTAGGTGAG
CTTGATCTCTCTGACAATATGATTTCAGGAAAGATTCCTACCAATATTGGGGAGTGTCGA
AGCTTACAGTACCTCAATTTATCTGGGAACAATCTCGACGGGACGATTCCGCTGTCACTA
GGACAGTTAAGGGGTCTCCTAGTGCTCGATCTTTCTCAGAATAATTTATCTGGGAGCATT
CCTGAGTTCCTCGGTACAATGACAGGTCTTGCTAGTTTAAATCTCTCTTCCAATGATTTT
GAAGGTGAAGTTCCGAAGGACGGAATATTCCTCAATGCAACGGCAACCTCGGTCATGGGA
AACAATGCTCTGTGTGGTGGGATCCCTCAACTGAACTTGAAAATGTGCTCCAGTCCCACT
AAAAGGAAAATATCTTCAAAGCATCTCATGATTATCGCAGCAGGCGCTGTAATTACGTTG
GTCATACTATCTGCAGTGTTCGTGTTATGTAAAAGAAGCAAGCTTAGAAGATCAAAGCCA
CAGATAACTCTCCCCACTGACAAATACATCAGAGTTTCTTATGCTGAATTGGCCAAGGCA
ACAGATGGTTTCACATCCGAGAACCTCATCGGGGTGGGCAGCTTTGGTGCAGTGTACAAG
GGAAGAATGGAAATCTCTGGCCAACAAGTGGTGGTGGCAGTGAAGGTACTCAACCTGCAG
CATGCTGGCGCATCCCGAAGTTTCGATGCGGAATGTGAGGCTTTGAGATGTATTCGCCAC
CGGAACCTTGTGAAGGTTATAACAGTGTGCTCAAGTATTGACTCCCGAGGTGGCAACTTC
AAGGCTCTTGTGTTTGAGTTTCTGCCAAATGGAAATCTAGACCAGTGGCTGCACAAACAT
CTCGAGGAAGACGGCGAACCCAAGATTCTAGATCTCATTCAGAGAACCGAGATTGCCATG
CACGTGGCTTCTGCGCTTGACTATTTACATCACCAGAAGCCGTTTCCAATTGTCCACTGC
GACCTCAAACCAAGCAATATTCTCCTCGACAACAACATGGTTGCCCATGTCGGTGATTTT
GGGCTTGCAAGGTTCCTACATGATGGACATAATGACATGTCAGAGACATCGACTAGTCGG
AACGTAATAAGAGGAACGATCGGTTATGTTGCTCCAGGTGAGCATAATTCTACTCTCAAC
TGTTCCATCATTGTTGCATTTGTTTTCACATTTTATTTTTACCCTCCATCTAAGGAAGCA
CTTATTAAATTTATCACGTTTGTTAATCTCAGAATATGGACTTGGCCATGAAGCTTCAGT
CCATGGTGATGTCTACAGCTACGGTATACTGCTGCTCGAGATGTTCACCGGAAAAAGACC
CACAAGCTCTGAATTCGGAGAAGTGCTCGGCCTTCATAAGCACGTGCAAATGGCACTGCC
AGACCAAGCGGCTTTTGTCATTGACCAAGAACTATTAAAAGCAGGAAGTAATGGCAAAGG
AACAGAAGGGGGATATCATAACAGTGAAGACATGAGAATTAGTTGCATCGTCTCGATTCT
GCAGGTTGGAATTTCATGCTCCACGGAGACGCCAACTGAACGCATTCAAATTGGAGATGC
ATTAAGAGAGTTGCAGATAATCAGAGATAAGTTTTACGCACATTAGTGATCTCCTTGGTG
AATTGGCAAAATATAGCGAAGGCACACTGAAGCATGCTTGTGAGGATCATGTAATGGCAA
AGGAACTGAAGAAACTTAACTTACAACTAAGCAGCACGCACTTGGGTGCGGTGTCAGTTT
CACTGTCTCAGGTAGAGATGGATCTGAAGGATGCGGATGGACCCATTTTTCCATTTCTTC
TTCCTTTTTCTTTAGTTCCGGTCTTAAACCGACTCACTCCTTATTTGTTGCCTTTTCCTA
TTCTATATGAAATTGCAGGAGCATCCTGACATGTGCCGAGGTACCATCAAAATATTTTTG
CAGCTTGTATTAGAGTGTTATTATTGCAGATTTTACCCCAGCCAGTACAGATGTCGTCCC
AGATGACGAGTATACATACGAGCAAAAACACAAGAGGCTTATCGCAAGCTGAAAGAACAT
GCCCCAAAGTTTTCCAAAGAGTATCTCCAAAAGGAGAAACCACACTACCAAAGTTAATGC
AGCTGTAAAAAAAATTCACCGAATACTTTCCACTAGGTTCTAGAAGCCAAACAGGCAAGT
CCGACAATGAGAATCCTTCTAGATGTTCAATAAGTTGAACACAACTTGCCATACCCCTTT
GCTCAACACACCGTCTAAAGAAGAGTTTAAGAGCTGTCCCATCCCAAACCTGGGACAATG
AGAATCCTTCTAGATGTTCAATAAGTTGAACACAACTTGCCATACCCCTTTGCTCAACAC
ACCGTCTAAAGAAAAGTTTAAGAGCTGTCCCATCCCAAACCTGGAACACCGAGCATTCCT
ACTAGTTACAAATATTGAACAACTTCCAAAATTTAACTTTTAGGGAACAATTCACGGCCC
ATATATCATGCCAAAAGCTAATGTTATCATCATTATCAATTTTTCAGGAATAAAAAGTTT
TGATAGCTTGCAAAGCCCCACGATACACTCTTTCAAAAGGGAGAGCCTATCTGTTGTCTG
TTAGAATTAATGGGCTTGGCCCATCTACAAAATTCTGAAATCTCAAATTGAGCCCATGAA
TAAAATGGCAAGTGGTGGTGCTAAAGTTTAGTCCCATACCGCTAGTGGAGGGAGTGGTGG
AACTCTTTATATA