Contig Data
morexGenes
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Map Locations of contig_156617 (3875 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_156617

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13656 1 1744 bp MLOC_13656.1 Available Available LOC_Os10g34370.1, FRAME:-1, EVALUE:2e-149, 13110.m03058 protein expressed protein
MLOC_13655 2 1032 bp AK251252.1 Available Available None





CDS Structure of MLOC_13656






CDS Structure of MLOC_13655






Contig Sequence (3875 bp)

>contig_156617 3875 assembly3_WGSMorex_rbca.fasta
ATATTTAGGAATGGAGGGAGTATCAGTCATCATAGGCACAAAGTGCAATTAGTACAGTGG
GAAAGACAATCAACCTCCACTCAGTAAATAAATAAAATGATCACATGGTCATTAGTACTA
AATCCCAGTCATAGTCTAGCTTAAGAAAATCAGCAGTATCTGATCTATTATAGAGTATAA
AACATGTGTAAAATGGAATTAATGTGATGAGAAACACAACAAAATGCCACCTAGAAACAA
CATGCGTGCGCAACAAGTATTAGTAAGTACTCTACATTGTACTGCCTCCATTCCAAAATA
CTTATCGTGGTTTTAGTTCAAATTTTAACTAAAACCACGACAACTATTTTGGAACAGAGG
GAGTACTTATTTTTTCTCTAGGAGAAACAGACACCAATTGGTTTTCGTCTATTTGTGGTG
AGTGCTAGGCAAATAAGTGTTACTATAATCGTCTATTTGTGGTGAGTGCTAGGCAAATAA
GAGTTAATATAAGACGTCTTTGGACACTGTCATGGACTCTAAAAACATTTTATAAGAAGT
TACAGAGGGAGTACTACATAATCACAAACTACAAACTACCCCCTCCGTTTCTAAATATAA
GTCTTTTTAGAGATTCCACCATGAACTACATACGGATGTATATAGACATACTTTAGAGCG
TAGATTCACTCATTTTGCTCCGTATGTAGTCCGCAGTGGAATCTCTAAAAAGACTTATAT
TGAGGAACAGAGTATATTTGTTTGTTATGTAGTGATTTGCATCAGTCCCTCCAATTGTAT
GAATAATGATTCCCCTGTGATTCGATTTGACAGGCAAGACCACAACAGTGAGGACAAGGT
ACACTGTCATGTCCAAGGAGCTCCTGGATGAACACCCAGAACTAAAGACAGAGGGCACTC
CAACATTGACACCACGTCTTGACATCTGCAATGCTGCGGTGCTTGAACTTGGTGCTGCTG
CAGCTCGCGCCGCCCTTGGTGAATGGGGCCGTCCAGCAGCTCATATTACCCACCTAGTCT
ACATCTCATCCAGCGAGCTTCGCCTCCCAGGGGGGGATCTTTTCCTGGCAACCCGTCTTG
GCCTCTCTCCAAACACAGTCCGCACATCCCTTCTCTTCCTCGGCTGCTCAGGTGGTGCTG
CCGCCCTCCGCACTGCCAAGGACATTGCAGAGAACAACCCAGGGAGCCGTGTCCTTGTAA
TAGCTGCGGAGACAACTGTGTTGGGCTTCCGGCCACCAAGCGCTGATCGTCCTTATGACC
TTGTTGGTGCTGCTCTGTTTGGTGATGGTGCATCAGCTGCAATTATTGGAGCAAGCCCTA
TCAGTGCAGAAGAGGATCCCTTCCTGGAGCTTGAGTTCTCGACCCAAGAGTTCCTACCAG
GGACAGACAAGGTAATTGATGGCAAGATCTCAGAGGAAGGGATCAACTTCAAACTGGGGC
GTGATCTGCCGGAAAAGATTGAAAGCCGCATAGAAGGGTTCTGCAGGATACTTATGGACA
AGGTTGGGATAAAGAAGTTCAATGATGTTTTCTGGGCAGTGCATCCCGGTGGACCAGCAA
TATTAAACAGGCTGGAGGTTTGTCTTGAACTTGATCCAGATAAACTCAAGATCAGTAGAA
AGGCCCTGATGAACTATGGGAATGTGAGCAGCAACACAGTCTTCTATGTGCTGGAGTATT
TGAGGGATGAATTGAAGAAAGGGACAATAAGGGAAGAGTGGGGATTAATCTTGGCTTTTG
GCCCAGGCATCACATTTGAAGGGATGCTAGTTCGGGGCATTAACTGAAACTGGAAGGGAT
CCAAGTAGGATACTACCAGATACATGGAAAGATCACAAACAAGCTTTACATGGCACAATA
CCATTTCGCAATTATAATTATATAGTGTAAGAATAGCAGTTCGCGATTATAATTATATAC
TATAAGAATATCATAAGAAGCATAGCGTCTTGATGATTTCTGTTCACTACTTACTCAGTA
CTTTGTTGTATTTTATGCTTTATGCTATCAATTATCAAACAATGTCAGTTGCTCGAGTTT
GTTCCCAAAACTGTACAAGTCAGGCACTATTACTGCATCGTGTTCCACTATGGCGCTATA
TGACTTACTAATTCATAAGATCACTCTGTAATTCTTTTTACTCTGTGCTGGTTGCACAAT
GTACAAGTGCATGAGCAAACTAATATCGGTACAACTACTATCCTCTCAGAAGGAAAAAGA
GGCAGAACTATTATCATTAAACTATTCTAAATTATACTAAACAAACGGTTACATTGATAG
ATAGTAGTAGATAGTAACATGATTCCCCTAACGCTTCAACAAATGTAATATCTTTTTAAG
TATTACCAAAAGACAAGAAAATAGAAGAAGCCCTTACAGAGAAGGGATTATGAAATGGCA
CTGACCATTCTGTCTTATAGAAACATTACACTCTGATCTAACCATTGGACCTTGAAAGAT
GGCCCATGATAACATGAAGATAATACTAGAACCCATGAGAATGCCCTTCTTCATCTACGT
TATTCAAAGGCCAAAACACTTGAATAAATCAGAACTGGCCCGCATGTCTGAAACAAATCA
TGGATTTGAACTTGGTGCTCCCTCTTCAAGAGATAATTCACCAGCAATCTTCTCCCAAGA
AACTTTAGCATCCCCTTTCACAAGAAAGTTCATCTTGGCAACAACAGCCTTCGCCTCTGC
AGACCTCCCTCCCTTCACCAACCCCTCGACTAAACCCTTGACAGCCTCAAATGATGGGGC
TGCCTTCATAGCAAAGCAGCTGTTGCAAAGCCACAGCGCATCATCAAGCCTTTCCTTCTC
TACCAAAGTCCTAAACAGCAGGACATATGTCTGTGAGTGCACCGACACTCCCAAGTCACT
CCTACCCTCCCGCCTCTTCATCACCTTCATCCTCTTGAATACCCGCATGGCGGCCCCGAC
ATTCCCCTCCTTGCAGTACCCCTGCACAAGCGCATTGTAAGTAACGTAATTGGGCAGCAC
ACCCTTTGACTCCATGACATCGAGCAGCTCCTCGCCCTTGAAGGTCTCCCCCTTCCTTGC
AAACCAATGCATCCGGCAATTGTACGTGACGACATTCGGCTCCAGCTTGTTCTCGTTGAT
CTCCTTGAGCAGCTTTTCAAACTCCTCAACATCGTCCTGCTCGGAAAACCCAGCGAGGAG
AGTATTGTAGGATATGATGTCTGGGGGCGGGCGATGCTTGAACTTCTTCTTGGCCATTTC
GTTGAGCAGCTTGCGGGCGGCGGGGAGATCGGAGCTCTTGACCAGAGTGTGAAGGAGCAC
GTTGTGGGAGGCGCTGCCAGGGGCGACGCCGAGCGAGGACTCGGCTGATTTGAAGGTTGA
CTTGAGGTCGTCGATGCGGCCGGCGCGGAGAAGCGCGGAGAGGAGGGCGGAGAGGGAGAC
GTCTGAGCGGGCGGCGGGCGCGGAGGAGGAGAAGGCACGGACGGCGTCGTCCGGGCCCGG
GAAGAGGGAGAGGGCGCGTGCGAGGAGGCCCGGGGAGACCGGGGCGGAGGCGAGGAGCTG
GTCGAGGAGGGAGGCGGCGAGGTCGGGGCGGCGGAGGCGGTCGAGGCGGGAGGCGGCGAG
GGAGAAGAGGGCGCGCGAGGTGTGGAGGCGGTGGTAGTCGGGGCTGGAGAGCGCGGAGGC
GACGAGGGAGTGGACGCGGTCCGGGTCGGTCTCCGCGCGGACGGCGAGCTGGAGATCGAT
TATGGAGGCGCGGACCGCCGCGCGGCCGGGGGCGGGGGCGGAGGCTGGCGAAGGATCGAC
GTCCGCAAGCGCGGAGAGGCGGCGGAGGAGGTGGGCGGAGACGGCGGAGGGGGGGGGGGG
GCGGCGGGGCAGGGGGGGCGCCGTGGGGGTTGGTG