Contig Data
morexGenes
Links



Map Locations of contig_1566127 (3663 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1566127

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13638 1 1526 bp MLOC_13638.1 Available Available LOC_Os10g33350.1, FRAME:-2, EVALUE:3e-81, 13110.m02933 protein endo-beta-N-acetylglucosaminidase, putative, expressed
MLOC_13637 1 530 bp MLOC_13637.1 Available Available None





CDS Structure of MLOC_13638






CDS Structure of MLOC_13637






Contig Sequence (3663 bp)

>contig_1566127 3663 assembly3_WGSMorex_rbca.fasta
GGTTGGTGGATCGTGCGGTCCGCGCAGCCGGCCGAAAGTTTGGGCCGGCGCAGATCACTC
CCCTTTTTGAAAGGTGAAAATGAGAGTGGTTCAGCAGTCCACACACGAACGAGGGGAGAA
TTGACGAGCGCGCTTTGGAGTTGCTCTAACCATGCATGCTCTTCCCGTCAAAAAAAAAAA
AAACATCCATGCTCTTCACAAAACGGCTTCCTGTCACACAGCCCATCAAGATGGCGGACA
TGGAGGCCCCACCTGGGTCCCGGAGGAAGCGCAAATGCAGGGACACCGCCGCCGCGGCGG
TCCTACCCGATCCGGCATGCTCCTACCCGGGTACATCGCGCACGAATTCCTTGCGCACGG
CACGGTCCTGGGTGAAAGGCGCGCTCCGAGGCGAGTCAGGGCCGGGGGCAGGCTTGCGCG
CGGTACGAAGCCGTGGCAGCGCTGGTGCAGGTTGGCGGCGCCTGCGTTCCCGGGGTGGTG
CTCGCCGCGTGGGCGACGACGAGGTGAGGAGGCCGCGGGGAAGGCGTACTGTACATGTGT
GTAAGCGTAGCTAAATCCCTGCTGATCATCCGGAGTCTCATTAGTTAGAGCTTATGCTGA
CGATGTACTCCGTAGGTCGGATGAGCATGAGATCTGTACAGCTATGTTCTCAACGATACC
ACATGGTAGTAATATTGCCTTGGTGTGGTTGGTTCCACTACTAGTGTCTGATTACGCAGG
TGTTCACGACTTGTGCATTGGTTTTTCTTCTTCTGATCTAGTGATTCCCTAGGACTGAAT
CTAGAAACATTAGCACCACTTGCCTGCAAGTTTCCTAGGCGCTTAATTCTTAGTTGAGGA
ATGCATGCTAGCACTACTGCACTCTTAGGGCGAAAGATATTGCAGCAAATAGACAAACTG
AAACTGAGATAGGTGATCAATCTGTATCCATCCACAACTGACCACAGTAATAACCGGATG
AATGCATATGTACTTGATGGATGTAATCAGTAATTACATCTTGAGCATCCTCTTCTGCAT
ACAAAGGGCACCCACTTGTTCTACCCTTGCTGTGTGGGAACTGCGGTGCGCCGCAGCCCG
TGCCGCTCCATGACCCTTCTCATCGCGAGGGCAGCCGCATCACCAGCCTGCACAGACCCT
GTCGCCATGATGGCCGCAAACTCCTGCTTTAGCTCCTCCTGCACTCGGTTCTTCGCCTCT
CCGAGGGGGTCTGAAGTTGCTGCCGTTGGCACAGTCACCTGAGCCACCGCCGCTGCTGGA
GCAACAGGTTGCACAGCTGGTGGGGTGATGATCCTAGTGCCCTCGTCCACCGTCTGTAGT
TCAATGCTGTTTAGGGAGGGCTCTGTCTGCGTCGCTGCTGCTGGAGTAGCTGGTTTTGCC
GGAGGCGGGATGATGCCACAATCACTGTCCACCATTTCATCAGCGCCAGCTTCATTGGCG
GCGACTGATCTCGATTCTATCTGGTCGTTCTTCGTGGAGGGATGTGTCTGCACCACTCCC
ACTCCCTTGGGTGTGGGTAGCACTACATGCGGGATGATCCCGCTGTCATTGCTCACCATC
TCACCCTTTGCAGTTTCATTCGGAGTGCTTTTCGTGGAAGGCTGTGTCTGCGCCGCTGCT
GCAGGAGCAAGCACGGATTGTGGAGGCTGTATAGCAGCTCCTGCTCGCAATGTTGTCTCC
AGCCCCTGAATCATCGGCACTGGAAAGCCAAAGATCATAGTTTCCATTAGACCTAGATGG
TCGGTCGTTGCAAAATTCAAACTCTTAAACCGGGAAAGGCTAGTGGGAGAAGAGATCTTA
CTTATCAGTGCGCCGATCGGGCTCTTCATCGCCTCCTTGGGCTGGTCGAGGATGTAGCTC
GGAATCGTGGAACCAACGAGGAATTTGACGACCTCATTGCTGAAGTGGTTGCAGTTGTTG
GTGAGGAGGTTGTAGGTTTCTGGTGTGTAGCGCGGGCTCATCTCCTGCAGAAAGCCTTCA
AAGTCCTCCTTGGCGACATGCGTGACGCCGAAATGCTCTACACGGGCAGGAGTCCCGTAT
GGCGTCCTCCCAGGCCGGCCTTGCTGGATGCCTCCCCCGAAGTAATACTCTTTGCCATGA
ACCACCACGCCTGTGTGCCTGTGATGACAGGGCCGTTATCCATCAACATTAGGAGTGAAT
TTTGCAGAATATATAGTTTTAGCGCGTAAAAGGTGCACTTCATCCATAATCCGCGGCAAC
ATCCAATTGCGAAAAGCCTGAAGATGCATCTTGTGAAATGTAGGACGCACCAGGTCCCTT
CCTACTCTATTTTCAACGATTTTTGGGAGCAGGAATGCACTGGGGTCAAGAAAAATTGCT
TTGTGGCAATGGGTATAAAATCTGCTCAATTGCATTTCCTTTAGGTGATTGTGTAATAAA
TTTACTGGAGTCCTGTAGGTATGAAACAGAATGGTGCACCTAAATTTATTGATCTATATA
AATTCGACAGAGGTTACAACTGCATAATTAGCCTGCATTGAGTAGATGCATGTAAACACA
GAGAATCAAGACTGCAGATGTGGCCAGAAATCTAGGGTTTGCGGAATTCAACTGTAATTT
CTATTGGAAGCTAAGGTCCTGTTATAGACCTAAGTCTGCAGAGTCCACTTGACAATTCTC
AGACGAACGAGCAGGCTGTCTAAAAATTATTCAAAGGAGACTCGAGATAAACTTTTGTTG
ACATGTCAAAAACGCCATATATATGTAGCCAACCAAGTCAGACACTATCAGTGAATTAGC
AGACCGTCTAATAATCTCCTAAAAGAACTTTTATGTTAAAAACTTTGGTACGGCGAGATG
TGCATGTATGCATGGGGCTTATTAATTATAGGGAAATAATCCCTCAAGAAAAAATGTAGG
AAAAGAAAATCCTATTCCAATTTCCTGATGGTCGGGAAGAAGAAAAAGATTTTGCATGAT
TCAAGGACGCTCACCAGACGGCCTCGATGGCCTTGCCGAGCACCGTCGTGGAGAGCTGCC
GTGCCATCCCCCGACTGATATCGTAGATGTGCAGCTTCACCGGGTACTCATCCTGCACCA
CCACAACCATGAATCGTCTCAGCTCCAATGCTCCATGCGGAGCGAACACATCACCAGCTC
AATTTGGACGGAAACCATAGTTACAGCAATTTCCTTCCTTACCTCCGCCACCTTACCCCG
AGCCTGGCCTCCTCCGAAGCATCCGCACCTGGCAAGAACAGGTAGCTTCCATGATACCAG
AGAACGACAGTGCTGCGGCAGCTTCAAGTTTCTACAGGGAACAGAGAAAAAGGGCAAGGA
TGACGAAGGCATACCCAGCGAAAGCGAATCTACTCCGGCGTGGCTTCGCCATGTCCGAGC
TCGTTGGATGGAGTTTGCACGCACCAGAAGGCGTGGTCGTTGGATAAAAACAAGGCCACG
GGGTAGGAATCGAGGTTGGTTCTGTGCTGGTCAAGGACTCGACCGCCTTTGGTTTCTTTG
TTTCTTTCTTTCTTTCTTGCGCAGGGGTTTCTCCTCTCCTCCTACTCCTCCTGTCTGCGT
TGCGTGGAGTGGAGAGGACTCCGGCCGAGACAAGCCAAGAGGAATACACTACTACCCTAA
TGTTTTTTTTTTGGGGGGGGGGGTTTGGTGGGGGGGGGGGACGGCGGGGGGGGTGGTTGT
GGG