Map Locations of contig_1566097 (6542 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1566097

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13622 3 1609 bp AK354984 Available Available None





CDS Structure of MLOC_13622






Contig Sequence (6542 bp)

>contig_1566097 6542 assembly3_WGSMorex_rbca.fasta
ACACCGCCGTCGCGGCGCCCGCGCGGAGCGCGGGGAGGCGGCGGCTGCTCGCGTCGCGCG
GGGTGGTGGTGCTCGGCGCCGACATCAACGACGCGGCCCTGCTCGAGCGGCTCTTCGCCG
CCGTGCCCTTCACGCACGTGCTGCACCTCGCCGCGCAGGCCGGCGTGCGGTACGCGATGC
GGGCGCCGCAGGCGTACGTGGCCTCCAACGTCGCTGGTCTCGTCAGCGTCTTCGAGGCCG
CCGCCAGGCACGCCGACCCGCAGCCGGCGATCGTGTGGGCGTCGTCGTCATCGGTGTACG
GGCTCAACACCGACGCGCCGTTTTCCGAGGACCACCGCACGGACCGGCCGGCGTCGCTGT
ACGCGGCCACCAAGAAGGCCGGGGAGGCCATTTCGCACGCGTACAACCACATCTACGGTC
TCTCCATCACCGGCCTCCGGTTCTTCACGGTGTACGGTCCGTGGGGACGCCCCGACATGG
CTTACTTCTCCTTCGCCCGCAGCATCGTCGCCGGCGAGCCTATCACGCTCTTCCGCGCCG
CCGACGGCAGCGAAGTCCGCCGCGACTTCACCTACATCGACGACGTCGTCAAGGGTTGCC
TCGGCGCGCTCGACACGGCCGGCAAGAGCACGGGCTCCAAGTCCGGCAAGAAGCGCGGGC
CGGCGCCACTCCGCGTCTACAACCTCGGCAACACCTCTCCGGTGGCGGTCACTCGCATGG
TCGCCATCCTCGAGAAGCTACTCGGCAAGAAAGCGAACAAGCGCGTCGTCACCATGCCGA
GCAACGGCGACGTGCCGTTCACGCACGCCAACGTCAGCCACGCCGCGCGCGACTTCGGAT
ACCACCCCACCACCTCACTCGACGCCGGCCTGCGGAAGTTCGTCGAATGGTTCCTCCAGT
ACTACAAGATCGACCCCGCGAAGCTCGCCAAGGGCAGCAGAGCCGGTACCGGCGGCGGCA
AGACTAGCAAGAAGAAATCCGTGGGCGCCATGTCCGCGGCGTCGTGAGGAGAGCGCGCGC
GACGCGTGTCTCCCGGCCCGGATGTCCAGTTCACCAAGTGTGCATTCTGTTCTCCTTGGA
GGCTGGCGGTTGTCTTGCACAACTTTGTGAGTGCATCCCCATTGTTTAAGCCATTGTTGC
TGCTCTTTTTCCTTCATGATGCAACCATGCTGGAGCTCTGTGGGAAGGGATCGTGGAGGT
GGCAAGGCAAAGGAGAAGCGATTCTTTCTTCATAGCATAAGCAAAACTAAACTATTTAGG
GAAAAAGGATGGGGGGTATAGGTAAGATGACATGAGCCGTGCAAAGGGGCAAGGAGAACA
CGATAAAGATGAAGTCCTGGGCTTCCTTTCCGGACGGTTCAGATTGTTTTTAGTCAGTTT
CTTCTTTGTTTTGTCAGTCACTGTCCTGTTCTTGCTCATTTGTTTAATTGATCTTGTGCT
TTGTGAAAATGTGAACAGTTATGTAGTATTCACGACGACAAAAGCACGAGATGCTGTAGT
GGATGAAAAAGTCCGTGCGAGCAGCTGCAGTTTTCCAGATTGCTAAAGATATTTTTTTAA
ATCTTGGTTGACGGTGGATTTGGTGCAATGTATTTCATCAGATATATAAACCTGCCCGAT
TCATGGTTTTTGTTCTCTGAACAAAACCATGTTGTTGCATGTGAGCGTCCCTGACTTGTG
AGCGTGTTTTCTTCTGATTTATGTGGCATTATATGCGAGGTACTGTCGTACTGAAGTTTG
GTGGCAAGCGTGTGAGGGAGTTAATTTGTTTGAGCCTTGGACACCACCCTTCCGTACATT
GATGTTTCTTGCTGTCTACAAGTCGGCGCGATGACTGAAGTTGAACTAATGCACATTCTA
GTTTGTCGAGCTGTCTGAATCCTCTTGTGGAACTGTGAGGTTGCATCAGTATGAACTTAG
GATTCCTACTAAACACAATGTTGCTGCCTAGCACCATATGCTTCAAGGGCGAATCCTGTC
CTCACTTGGCTTACCTAACCTTCTATGCCTTGATTCCAGGGCCATTTGATCTAGATAAGC
CTGCATTTCATGCCATGCTCCTGCAAGCCTGCCAGAAAGTGTGAAGGGCAATGCAGTGAA
CATGGCCAACTAGATAGGACCACACGCAGAAGAGAATACAGGCCAGCCGCATACATCTTT
GTAGGCGGAACACAACAAAGAGGCCAGTTTTTCCGGGCACCGATGAGGCCGGAGAACGTG
GCCAAGCTTGCGGAGATTGCACGGCTTTCCTCCCCGGCGCAGCTACGTCTGCCAGATGAA
GAGCTGCAGGCGATCCTCGAGGAGCTCTCGGGAGGGCGTCCTAAAACGCAAGGCGCTAGA
TGTGCTGTTGCTGAATCTGTTTCCATGATTAGTTCCGTTCTGTCATGCCTAGTTTCGTTT
TCATTTGCGCGTCGTTTGGTTGCCGTGCTAGTGCAAGATGTAGCCTGTACCTGGTCGCCT
GTGGTGCGTCGTCGCCGAGGCTGCCCTATTTGTGGTTCCATTAGTTTCCTATGAATGATC
AACTTTCTGTTATAAGCTGGAATGTTCGGGGACTGAATGATCCCGCCCGTCGCGCGAGAG
TTCACGAGCTGCTTGAGCGCTCTTCTTGTGCTATTGTATGCATACAGGAATCCAAGCTCG
CCGCTTTCTCGACAAGCGACAGGGCAGAAACTCTAGGTCCAAAGTTTGATATGCACGTTG
CGGTTGACGCGGTCGGCACTAGGGGAGGAATCCTACTGTGTTGGCAGTCTGATAGGTTCG
CTGCCAATAGGATTGACGCCAGGGAATTCTCCATCATGACATGCTTCTCACCGGCGGCTG
GAGGGGACTTGTGGTCTCTCACTAATGTGTACGGGCCTCATGATGAGGCCTGAAAAGCAG
CTTTTCTTAATGAACTAGCTCAGCTCCACAACTCTATGCTTGGCCCTTGGGTGGTTGTAG
GCGACTTCAACTTAATCAAAGACCCTCAGGATAAGAACAATAATCAGATATGTAGGCGTT
GGATGAACCGCTTTCGGAGGACTCTAAACAGGTCCAGTTTGCATGAAATACCGCTTGTTG
GGCGCAAATACACATAGAGCAATGAGCAGCTTATCCCAACACTTGTCCGTCTGGACCGTG
CTTTCTGTAACATGGAGTGGGAACTGCTCTTTCCGGTCGCTAAGCTGCTACCGCAATCCT
CTGCCATCTCGGACCATTGCCCTCTAATGCTTGTTAACGAGGGAATCATTTGCATCAATC
GTCGGTTCCGCTACGAGAGCTATTGGCAGTTCGTGGAAGGACTCTATGTGGTTCAGCAAG
CATGGCTGGAAGGGATGAGGAATACTTGCCCGCTGTCTCGCCTGGACACAAAGTTGTGGA
GAACCAGCAAAGCTCTCAAAAATTGGAGCAAAACGCACGTCGGGGATCCGCCAAGGCAGC
TGGGGATTGCCAATGAGATCATTCTTCAGCTCGAGACCGCGCAAGAGGATCGCGAGCTTT
CCGCGGCCGAGCGAGGCTTACGACACAACCTGAAATCCAGAATCATGGGATTAGTCGTAC
TGTTGAAGATCAAAAGGAGGCAATGAAGCCGGGTCTTGTGGCTGAAGGCTGGGGACGCCA
ACACGAAGTTTTTCCAATGGAAAGCCAATGTGAGGCACAGGAGGAATACGATCCACGTTC
TACATGGACCGTAGGGCGCGACCACATCTCCGGATGCGATGACACAGCTGGCGCACAGTT
ACTTCACGGATGTGTTTGGAAAGTACTAGGCACCAACGGCCAAGTTTAACTGGGAAGAGC
TTGAGCTTGACCAGGTTGACCTTCATGATATAGAGGGGGTTTTCACCTTACAGGAAGTGA
AAGCGGCAATCGAGTACACGCCAGCTGACAAAGCACTGGGCCGAGATGGCTTTTCGGGAG
GATTTTTTAGGGCATGTTGGGAGATTATTAAGTATGACCTACTTGCTGCGCTGAATCAAC
TGTACCACATGGACAACATCGACCTTGCAAGGATAAACAAAGCGTTGATTGTTCTCCTGC
CAAAAAAACTGGGCGCGGATAATCTAACTGATTTTTAGTCGATCTCTCTTGTCCACAGCT
TGGTCAAAATCTTCACCAAAATCCTGGCGCGGCGCTTAGCGCCAAAGTTAAGCCAACTAG
TTGACCCTTGTCAGGCCGCATTCATCAAGCATAGAAGCATCCAAGAAAACTTCCGATACG
TCCAAAACACGGCTAGATTCTTTCACAAGAGCAAGAAAAAGGCAATCTTGCTGAAACTGG
ACATTGCGAAAGCATATGATTCGGTTTCTTGGACTTATATTTTGGACATGCTCAAGGCAC
GTGGGTTTAGCGACAGATGGAGGGAATGGGTCGCGATGCTCCTGCGCACTTCCTCGTCAC
GTGTCTTGATCAATGGAGCCATATCCTACTCAATCACGCATAGGAAAGGTTTAAGGAAGG
GAGACCCAATCTCTCCTTTCCTCTTTGTATTGGCCATGGATCCTCTCCAATGGATCATGA
ACCTTGCAACGGAGAGTGGCCTCCTCTCAAGACTTCCTGGCAGGCGTCAGGTTATGCGCT
GCTCCTTCTATGCCGATGATGTCACCTTGTTCATGGCGTCGGCGCATTCTCATGCTACTA
TGATCAACCTACTCTTGAGCTCTTTCGGCAATGTAACCGGCGTGCGCACCAATGTCCTCA
AAAGCTCGGCTTTGCCCATCATATGTGGCAATCTAGACCTCAACACAATACTTAGTCCTC
TCGGGATCCCGGTGATGCATTTTCCGTGCACGTATCTTGGCATGCCACTGTCATTGTGGT
CCCTCAGAAAGGTTGACCTTGAGCCCTGGTTAATGAAGTTTGGAGACAAGACTGCCAACT
GGAAAGGAAATATGATGGCCAAAAGTGGAAGGCTTGTACTGTTGAAATCAAATCTTATTT
CACTTGCTGTCTATATGATGACAGTTCACAAATTACCTGCATGGCTCAGGAAACGACTCG
TTTAGATTTGCACAACTTGGTTGTGGAGTGGAGAAGCGACCTGTAATGGAGGCAAGTGTC
GAGTCAGCTGGAAGCCGTTGGCTCGACCGAAGCATCTGGGCGGACTGGGGTTTTTAGACC
TAGAGAGATTTGGCCAAGCATTGCGCCTACGTTGGCTATGGATGTCTTGGCAGGACGCGC
TGAGGCCTTGAGTTGGCTCGCCGCTGCCGTGTGACAGCTCTGATCGGGCCTTGTTCTCCA
CAACAACATCGATCACCGTCAATGATGGTAGGCTTGAAAGCTTCTGGCATGATCGTTGGC
TGCACGACACTTGTCCTAGGACACTTGCGCCTAACCTTTACAATATTTCTATCCAGAAAA
AATCGTACGGTTAGGGATGCGCTACACGATGATTGGTGGTTGCACGATCTTGCGCAAGGG
CTAGAAGAATGGATGGAGGAGGAACTGTCTAATCTAGCCTCACTTCTAGACTCTATCCTC
CTTGTCGAGGGCCTGATGTACTGTGTTCCCCTCTGATATACGAATTTGGTAGAGCAACTA
CCAACATTAAAAAAACAAATAGGCTCCTGTTGAAGTCTGAGCTCCGCATTGTGGTGATGG
AGAATGAAGATCAAAGCCTACCTGTATGCTCACGCTTGTCAGCATAAACACAATCTGCAT
GGTGAGCATGCCTTGAAGATAATCTGGAATTCCCGATCTCGATACCTGAAAGCTGAGACC
TATATTGCAAAACTGTGGGTGGCAATCCTCGTACATTTGTGCTGCTTCCGGGCTCTACGC
CAATCCCTTTATCAGTTGAACTAAGTGGTAAGAGCATCTACAACCTAATTTAGCAAATAT
GATTCATATACGCACGTGGGCGTATCCCGTTAGTCCATTTTAAATCCTATATTTTTGACC
GTGCAACTACTGTCGTCGTTTTCTCACGATAGATGTCATGAGATGGTTTATCGAGAGTGG
TTGGGGTCGAAAGGATGCCGGCGGGCTTCGAAAACGGGATCGCGGACAAGCGGTGCGAGA
CACATGATGTACCCAGGTTCGGAGCCCTGTGTGGGAGGTAACACTCCTAGTCCTGCTGGT
TTGGGTGATGAACCGAATGGGTTACAATGATGTTCCTTGAGCTGTGCGACGAAGGAGGAA
GAAGAAGGTGGATGCTCACTCTACCTCTCGTGTATGGATGTGTGTGTGCGTGGGATCGGC
CGACCCCTTGCATGGGGTGGTACCACAAGGATTTACAGGCCAACCCCTGGCTTAAAATAA
AACAAATGGTACCGGGGGACCCTGCTGGCAACTTCTCTGGCCTACCAGGGGGCCCACCGA
CCAAGGAGTCTTGTCGCGTGTAGGGCCCGCCGACTGCAGGGTCCCGTCGGGAGCCCGGGC
CCGCCGGCCAGTCATTGCTATTGGTGTGTGCTCGTCACGCAGTGGCATGGGCCGCACTGT
GCGGTGTCGTCTTGCGGAAGCATACTGCATTCAGCGGTACGCCCGGCTGCACAATAGCCA
CGTGCGGAGCAGGTAATGGAGTGGATGGGGGCGGGCAGGTCTGTTGGAAATATGCCCTAG
AG