Contig Data
morexGenes
Links



Map Locations of contig_1566071 (3991 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1566071

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13609 2 2243 bp MLOC_13609.2 Available Available LOC_Os03g15560.1, FRAME:+2, EVALUE:2e-38, 13103.m01823 protein wibg, putative, expressed





CDS Structure of MLOC_13609






Contig Sequence (3991 bp)

>contig_1566071 3991 assembly3_WGSMorex_rbca.fasta
CCATGCAACGTTCCCCAACACTTATCCCATGTAATCCAGTGTACTTTCCGTTCACCATTG
CTTCACCTCACCAGAATTTCGAGGAGATCGAAGTCAGGTTCCGACACATCTTCTTTGTGA
GTTGAAAACAACTCATGGTGTAGGTTGGAGTAAACTGTAACACAAATTTAATGAGAACCT
CTCTGGCCACCTTGGATAAACCTTGTCCGTTCCATCCCGAGACCTTCCCTGTTGAGCTTT
CCCTAACATACTTAAATGTACCATCTTTCGATCTACCAACCAGTGTTGGTAAACCTAGGT
ACTTCTCACTCAAGGCCTGCGATGTAACCCCAATCGCTTGCTTAAGCCCAACCTTGTCCT
CCTCTTTTCACCCCCTGCCAAGGAAAATACAAGATTTTTGGAGGTTTACCCTCTGACCCG
ATGCCATTTCATAATCTGCCAAGATGTTCCTCAAAGTCTCCATAGCACCTTGTGAGCCTT
CAAGAAAGACAATACTATCATCCGCACAAAGCAAATGCGTGACTTGGGGGTCAGTGCTCC
CAAACGAGACCCCTTTGATGGTATTCTTCCTTTGTGCATACCGCAAAAGTACAGAAAAGC
CTTCCACACAAAACAAGAACAAGTACGGGGATAGGGGGTCTCCCTGCGTGAGTCCCCTAG
ATGGGAGAAAACTTCTCGACATGCCCCCATTCATCTTGATTGAGAACTTCATTGCCGTCA
CTCGTAATCATTGCAATCCATATATCTACAAAGCCAAACCTCTTTAACATTTGTTCTAAA
AAGACTCACTCTACTCTGTCATATGTCTTCATCATGTCCAGTTTTATCGCACAAAGGGGA
TTCTACCTCTTCCTTGTTCTAATGGCATGAACACACTCATACGCCACGAGCACATTGTCC
GTGATTAGTCTATCAGGAGCAAACGCTCTTTGCTTCTCAAATATAAGCATTGACAGTATA
ACTTTTGGACGATTTGCAAAAACCTTCACTTCAATCTTGTAAAGGACATTACATATACTA
ATGGCTCGGAACTGAGAAAGTAACTCTCATGAGTTAACTTTCGAAATCATAACGATGACC
GTTAAAAGAATTAGGTGCAACCTCTCCTGCTAGAAATTCCCAAATAGTCGTACACACCCC
CACTCACAAGTCACAATCATCTAATGACTACTCCCTCCGTTCTTAAATATAAGTTTTTAG
AGATTTCATTAGAAAACTACATACAGATGTATATAGACATACTTTAGAATGCAGATTCAC
TCATTTTGTTCTATATGTAGTTTCTTAGTAAAAAATTTAAAAGACTTATATTTAGAAATG
AAGGGAGTATATCGTTAATCGTGTGGATTATTGTTGCTTTTATCAGAGGTGTGGGCGTTA
TTACGAGGCAAAGAAAAACCAAACACAATTCGACTCCAACGCCGCAATCTCACCCGACCC
AACCTCTCGGGTCTCCGGTATGAACTCTGACGCCTGAACTACCCCTAAACCCATCCCGTC
CCCGCCGCCGCCGCCGCCGCCTTCCGCCCCCTCTCCCCTCCAGACCCCGTACTCCTCCGC
GGCTATGGACGCCGCCACCGACGGTGAGCAGAGGCGCCTCCTCTCCATCCCCAAGGAGGG
CGAGCGCGTCATCGCGCCGACGCGCCGCCCGGACGGGACCCTCCGCAAGGAGATCCGCAT
CCGCGCCGGCTACGTCCCGCAGGACGAGGTCGCCATCTATCAGTCCAAGGGCGCCCTCGT
GAGTCCTCGCGCCATCCCCCGTGCACTATTCCCACACCACGGCGTCAAACCTGTTCCTTT
GCTGGACTCGTCGTTCTTATTGTGGGGCTTAAGCTTGTTTCGTGCTCGGTGCAGATGAAG
AAGACAGGGCCCGACGTGCCGCCCGGGTACGACCCTGCGCTCGATGCCAAGCCCAAGACG
AAGGCGGCCAAGCGCAACGAGCGGCGCAAGGAGAAACGGCACCAGGTAGGCCTTCCTCTC
TCACTGCAATGTGTGACCATTGTCCATTGGTGCTACAAAACATTCTGATTTGGTTGAATT
GGCATGGTTATATATTGTCCGAGGGCAGCATTGACCTTCGTTTTTTCCGTTAGTTGAGAT
TTATATATGCGCTAAAGATTAGCCTCGAACGATGCTGTCATTGCTAAAAATTGCGAAGAA
TAGATAAACATCAGTGTATTTTACCAAAGCTATTTGGCAGATAAATACTGATATCGCTTA
TATGTTTTCTATGGTGTTGCCTAACCGTAAGACTTCATTTTGCTGTGTTGGTAGTGATAC
CTGTTAGTTTAGGCCATCGTTGCAACTGACAATCATCTCCATACCATATTCTCCACAAAG
TCATGAACAATTGGAGCTTGCACAATATTTTATCACAGACAAATTAAATGTTCTGCATTC
AGTGAACACTATGCAAGTCAATGGCACTGTGGTTTTAGTTATGATTGCAGGCATTCCATC
GGGTTGTAATTTAGAACTTATGGTGACAAATGGAATTTAGAAATGACACAGGCTATAAAA
ATATAGCAGAACACAGTTAGGAAGATTGCATGGTTTTCTCATCTCAATCAGGCCGTGACA
CCATATTCAACGAACTAGTGATCCATTACTCAAGTTGCATCAGGATCTAGTATAGTAATC
TGGTCCAGTCTCATTAGTCATCACTCACAGTTGTACTGTAATTATAGTTAGTGGAACATA
GTTTTGTTATACTTTGCTCGCCCTGATTCATCATCATCATTATTGTAGTTCTGGTCAAGA
AATTAAGGATCTGAATATCTGGTCAAGAAAAGTGTGCAGTATGGAGCTTTGCATAAAAAT
ATATTGCTGCGAACTGACCCGGACAAGGTGACAACGCGACTATTCTTCATGAATGAGTGA
GAACGTAGCCTTATGGAAACATTGTATCTGTTCAAGTCGTGCGGCGAGCCCATTTATCCT
CATATATGACTCAAGTAGCAAATAGTTCAAGAAATAACCACCCAAACATTAATCGGTCAC
CCCTCAGTCCTATAAGGATGGTTTGAAATTTTCTTTTGCAAGACCAATGCAGCCGCACAT
GGAGCAATTTGGACCCTTTTGCCCCTTCCATGTCCCATGATTTAGCAGTTAGCAAACCCT
TAATCTTCTTGCAAGCTGCACCACAACTCTTTGATCTCTGTACACGCTTGGTCTGTTCGC
TCCCTGCACGCTCACCTGCCCGCACTTTCAGCATCACCCCCTCATGATGTACATGCCACA
TGCTGAATGCATGAACAGTTTGAGCAACCGACATGAATTGGTGATGGCGAGTATTCACAG
ACCATTGCTTCCTCGTCATTGAAGGACGCGTAAATGTGGCAGCTTAGAGGATTGAAATTG
TGACAAGAAACTACAAATAATGGTGCTCAGAATCGTGATCAATTAAACGCGAGAACTTCA
TCCACGACTGTGGCCACCATGGACCCGACAAACATGTCCCTGGCCACCACACCACGCGTG
GTCTTGTCGTCATCAAGGATCTTCAGCAGCATCTCGTCTACCACGGCCTTGACTACCTTG
TCCCAGATCTTCACCTACTCGTCGCATGTGGGTACTCTCGTCACCACATGTGTCCTCGCC
GTCAACAGCCTCCGACGGTGTCTTGTCTACTACGACAGCACACTGTCTTTCCCTTGAAAC
AATCTGTGGCAAAGGAGGTAGAAGGGGCGTGGCGTGATTTACTCATCCCTACATGCGTGC
GACATTAACTCCACAGAATTATGCAGGGCGTGGACTGAGAGGTACTTTTGGGAAATATAG
CGCTAAACATCCTCTGTCTCCTGATTTCCGGAATTTTTAGGAAAAGATTCACTCTTTATT
CTTTAATATACTCCCTCCGTTCCTAAATNNNAGTCTTTTTAGAGATTTCACTAGGGTACT
ACATACGGAGTAAAATGAGTGANNNNNNNNNNNNNNNNNNNNNNNNATACATCCATATGT
AGTCCTCTAGTGAAACCTCTAAAAGACTTAT