Contig Data
morexGenes
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Map Locations of contig_1565914 (4086 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1565914

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13559 3 1552 bp AK361285 Not available Available None
MLOC_13560 1 878 bp MLOC_13560.1 Available Available None





CDS Structure of MLOC_13559






CDS Structure of MLOC_13560






Contig Sequence (4086 bp)

>contig_1565914 4086 assembly3_WGSMorex_rbca.fasta
GCTGATGTTTCCCGGATGAGAAAAAAGTGGGGCAGTGCTCAGTTGCCTTTTGGTGGTGCC
AATGCATCTCAACAGCCACGTAAAGATGTCCCCAAAGGGTTTAAGAAGCTGCTGAAATTT
GGGAGGAAGAATAGGGGTGGTGATGGTTTAGTAAATGACTGGGTTTCTGCTTCAACTGCC
TCAGAATGTGACGATGATATGGAAGACGGCCGGGATCTAGCAATAGGATCCTCTGATGAT
TTCAGAAAGTCAAGAATGGGCTATCTTTCTTCATATGATGGTTTTGTTGAGAGTGAGGTT
TTCACTGAACAAGGTAATTTCCTTGCATAATCCTCTACGCGTGCTGTTTCAAGTATCTAT
GTCCGTATGCCTTAACCCTTTCGAAGTATAGTGTCATGACCTAGATTATGCTTGTCCCCC
ATGACAACTAGACTCACCTTTTATTGGCAACAATACATACTTTCCAACGCTTCTTTCCAT
ACTTAGATCTGAATAAAACCAATAGGGTAAGCCTTCATTTTAGTACAAGTGTTTTTCAGG
TCCTTCATATTTCCAGATAAAAGCAAATGACACTTTGTGTGAAGTCAAACTATTTGTGTG
CAAGTTGACTCACGCTATCTTCAGCTTATTTAAGAACTTCAGATGTTGGATTCAGTATTA
TAACCAGATAAACTAAAGTGACGGTGAACGAGTTACGTTATCCTTGCTGACAAGCTAATA
TCCTCTCTTTACATGTTACATATACTAACATTGGAATCAATTGTTTCTATCTCTTGCCAT
GAACGTATCATTTGCAGCACAGTTTTGTTGGTAACAAATATTAAATCCCCTCGTCCACCC
ACCTCTTTGCGCTGATCATATTTATGTTCTCCCCAATTCCAACTCCCTATTTTCTTTATG
ATACTGACATATAGAACGAAGTTTTGCTTCTCAGTGAAATGGGTGGACCCAAAACTAGAA
TCCAAAAACAGGGCCTTCCTAGATCATGTGCGCGCAGTATTGAAAGAGTTTTGCGTATGA
GAATGATACATTTACATTAGTGGATATTTGCTTAGACTTATGACTTTTGAGTCTTAAGTT
GTACATGTCTTTCAGGCTTCAGTTACTGTTCTATTTTGCTCTTCATTTCTTTTCCTGCAT
ATTCTGGTTACTTAAGATCTGAATTTGCAGAACAATCGCTGCGCAGCTCCATTCCAAACC
CCCCTGCAAATTTTAGACTGAGGGAGGACCAACTGACTGGTAGCTCAATTAAAGGTATAC
AAACGTCTATACATGTAGTATATTCTTATGTTAAGCTGCTCAATTAGAACATAACCCATG
AAGGTGACTGTTCATCTTTATCAGTAATTAGTGTTATTTGTTCTGTCATTTGTAATCTTC
ACCAAAAGTCTAAAACTATCTTTACGCCAAAATTCCAGCACCACGTTCGTTCTTCTCCCT
GTCGACATTCCGGAGCAAAGGAGGCGATGCTAGGCTGAGGTGACCCTCAAGCACCAGAGC
TGGATTGTATAAAATTTCTTCTGGAACTAGGTAAAGATATCAAATTTTCATGGATGGTAC
GCGGCACTGCTAGCTTTTCATATATAAATACATATCCTGTATCTATGATAATTCTTATAA
GCTGCCAGTTAAGCGTTTCCACTGTTGTTGTTTGCTAATTCTTTTTCTTTATCTTTTTTT
TCATCTCTTGTGTAGAGTTGGACTTCTAGATTTTTTGCAATTTTTCCACTTTGCCCAGAG
ACACTGTATTATTTTTATTATTTTTGTGATATGCTTGTATCTCCCACTCCATTTGTTTCG
CCGTTCACACATATATATCACAAATCCATTTCAAGGCTGTGTATTGTTCAGTAGATCATG
CAATTTTCTTTCATATACATATTGCTGGAGCATTTCTTGTACAGGTGACATGTGATGCAT
AATTGGCTTTACTTCTTTGCCCTTTGAACGTACACTTTTACCCCGTAGGTGTAAAGTTTT
CTTATTTTCTGAAGCGTATCTTGTGTATTAGTTGATTTGGACTGTTTTTGGGGCCAAATC
CGTGTCGGAATTCTTCGATTTGAAACATGCAAACGAGTTGCATTCTCTGCCGACATGCGA
ACTTCCCATGGATATATTCCTTTTCCGGAATTATGAGCAGGCAGAATGACTTTCTGAATC
AGAAAGGTTACGAAAGGCTACCAACATTATTAGGGTGAATTGCTCTGCTCTTCTTCCATG
GTTCTCGACCAAGAACTTGCAAACAGAATTGACATAATCAAAGTCCTTGTGTCCAGTCCG
TGCTCTTCCAAAATGACCACATCTCCATCAAAATTGTGATGGGATTCTCGGTTCAGAATT
ATAAGGCATGTATTGACCGCCCCAGGTTCAGTCTCCGATCGTCAAATTTCTTGTGCAATA
TTTTGTTAATAGTTACATATCACAACCATAAAGGAAATGCTTCTAAATATAAAATTCAAT
AATCCTCCCTTTGTAAACAAGTATAAGATGTTTTATAGAGGGAGTACAATTTTTGTGTCA
CAGAAAACCACATGTCGCAATATTAAATTGGACAAAGCTTAAAGATGGATAAGCAAAACA
CACCTTGTACTCTCTTCATTCCTAAATACAAGTCTTTTTAAAGATTTAACTAAAAAACTA
CATACGCAGCAAAATAAATGAATATACATTTTAAAATACTATATATATATATATATATAT
AAATATAGCTTTCTAGTGAAACCTTTAAAAAACTTATATTTAAAAACGGAGGAAGTATAT
CGTATATCTGAACGGAGAGTGTATGGACAATCAGTTTACGGAACAAATAAGAAGGGTATG
AAGAGTGATACGTAGAACCTGTAGATTTTCCCCTCAAAAAAAAAAGAACGTATAGATTTT
TTTTGACGGGTTGGAGAACATGTAGATAAGAAGCGTAATGTTATGTTTTTCGTTGACAGA
TCCATGTAATTTGCCTGGGCAAGTAAATGCAATCAAATTCTTGGATAGGATCCATGTGCA
TGCGTTACAAGTTTACACCACCCTAGTATTTTTCTAGTACCTAAATAATTGTAATTAAAA
AAAATTAGTCTAGTTTTTTTCAACTAGTAGTGAGTGTAGGCCTCCTCTCCCATGCTCCAC
GTACTAGCAACTAGTGTAAGCCCCGACCTAGCGCATGTAGAGGCATGACTCGGACTCTGT
AGATAGATCATGTCATCATGGCATGGCATCCTGCCGCCGTCCATGCACACCAATCGTATT
ATCTTCTGTAACTGCATTCAGCCCACTTTTGACTTCTGCATTCGAGTAGAGAAAACATTG
AGGGAATATTTGTCAAGACTTGGGTTGGACTGCTCAAATTTGAGAGGCGGCCGCTTCTAC
AGAAAGGAGTTAAAGGAAATGAGAGTTCAGCTACATACGACTTTACTTCTCAGAAGGGCA
CTACGTGACAGTGCTATGTGGTATCATCCAGCGAATCTATACACACTATATGCCCATGTA
TAGCCATCCTAAACTATATGTCCATGTATGTAGTTTGTAGTAGAATCTTCGAAAAGAATT
ATATTTACAAACAAAGGTAGTAGAAGTAAGGGCATGTATTATTGTATAACGGTATTCATA
GACAATTTTTTTAGCCAATTTATTCATAGACAGTAATATAGACAACCCATATAATGATTT
ATCTGTAAATAGTATATTTTTGGCCAAACTAATTGCGAGGAGAAATTACAGATGTACAAC
AACAAATTATTGTTTGAAAAAAATCCTATTTATGTCGGTAGATCTACAGACAAACTCTTT
CTTTCTTCTCTTTCTCTTCCCTCTACTTCACTAAAGTTTCTATGTGGCAACTCGTACACA
CAGCTAACTAGACATCATTGTATCTGCCCTAAAAAGACGACACTTGTTGAAGAAAACTCT
CCTCTCTTTCCTAAACGTGTGATACAAAGGGCCTGTTTGGGACTGCTTCACTCCATCAAA
ATCAGCTCCGCTTCATCAAATCCACTTTGGAGCAGTTTCATATAGGAGTTGCAACCATTT
TAAGAGAATGTTTGGCTCTCATTTAGCTCCAGCTTCACGGATGGAAAATTTGATGAAAAG
GATCTA