Contig Data
morexGenes
Links



Map Locations of contig_1565788 (6116 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1565788

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13479 2 1416 bp AK362030 Available Available None





CDS Structure of MLOC_13479






Contig Sequence (6116 bp)

>contig_1565788 6116 assembly3_WGSMorex_rbca.fasta
AGTCGGGGCAGACTTAGGGCCCTGTCCTTTGTGTGGGGTAGTCCTTGGGTAAGACCTGTA
TGGCAGGCCTATGACCCNNNCCTAGGACTATAACCCCATCAAGTAGTGTGTTAGTTCTTC
AGGAATTGGATGAACCCTTGGTGATTAGTACGTTGTTGAAAAAGTAATCCAATATTTCTC
TTTATATGTATTGTGTTGATTGTCTCATGGTGTTGTGAAGAGCACTCGCACAGCATTAAC
CCCTTGTGGAATTGAGGCAAGCCATGTTGGTGAGCAACATGGTTGTGAAGGATAGGTGGT
GACAGTTCTATTCTCCCTTTGTCCCTGGTCATTGCAATAGGGATTAGTGAAGAACCCTAG
AACTTCAGGCCGTGACCACGGGGAGTTCACTCCTCTTAATCATTGTTGTAATAACCGGAG
TGGGGAAGCACGATGGTGGCATGAGTGTACGCGATAACCGCATTCGGGGTGCGTACTTTA
TTGGCTCCGTCCATGCGAGATCATATAGAAGTGGCTTAGTGATACAAATAGAGAGCCATG
TTTATCATGTATTGTCAGCATCATACTTGTGGTGATGACTTTAATAATCTCGAGTACGTT
TACTACTCAAGAGAACGTTTACTACTCACGCACCATTTCTCTTAGTTTAGTATCTTTATT
TTTGTGTCTTTTATTTCTTGTGTGTAGTTTAATAAACACTATCCCTTTTATTTGTGGTCC
AAGCAACTTACTAATGTAGGCTATTTCCAAACTACGATTTGGATGCCTACGTAGCTACAT
AAGTGATAGTATAGTTGCCGGGTTTGTAATTCTTCGTGTTTGTTTTATGTGGGTTCGACA
CTTCATTTATCACAAAAGTGCTACAACAGCCACGAACATTGTCTTGCTCCCTCTTATTCA
ATAAGATAAGGCAAAGTTTTTGCCTCCATTTCAGAAGAATAGACATTGTACAGAAAGCTA
GTCGATTGATGAGCAACATGGAAGCCAGTTAGCCAGCCTTAGCTATAACTAGGCCATCAC
TTACAATTGGTAAAAGAAACTAAAAGTAGCCAGCATGTATATGTGGCACCAATCCCCATG
TTGAATTGGTCGATCGAGATCCAGCCCTGATAGTGTAAAATATACGCTCGGGATTTGTCT
CTGCCTTCGTCTCATGTGGTGCTAATTAAGTTGGCCACAGATTGGCTAATGAGGCTAGCA
ACTAGCAGCTGTGTTAAGTAGTGTTACCTCAACATAGTTCCCTGGTTAAACTTGTATAGT
TGCCGGTGCTGGAGGTCCCATCTTTCTCTTAAACTACCTAAATTACCCTTACAAATCAAA
CCATTGGTGATTGGTCTGTCCAAGTTGACACTGCAAATCAAACCACTCATTGATCCCAAG
TAAAGATCGATGCAGTCTGAGTCCAGGTGAAAAGAAGGGAAGACTCCATCTGGATTATGT
AGGAACCAAGTGCAACCGTGGAAGGTGCAGGCAGCTTTTGGTGGATGGAAAAATTGATTG
GCAAGCTAGGTCAGCTCAGCTTAGAGCATCTACAGCCGCACTTGACAAATCCGACCCGCT
ATACGCCCGTGGACGCGCCGGTCATGTCTGCGGACGCATTCGGACGGTCCCTCATATTTT
GTTTCGTGCATCCACATACCTTATATCGGACTCTCAAATCTATACAAAGTCATGCACATC
GATCATTCGATACTAAACATCGCACGTAAAACAAATGTTGGTATCGAACATAAAACATGT
TTACATTAATTTTATTTAAAGTGGACAATCAATCATCTGCTCTTTAATTTTCATTGTGGG
TCCATATATGGTGCACCAGATCATTGAGTAGTTGTGTGTGCACGTGATTATCTTGGAGCT
TCCCATGCATATGTAGAAAACTCATAAGCTGCATTGCATCTTGATCTTCGGGGATTTCAA
CTTGTTCTCCAAGTGCTTCAAAATTATTGGTTTGGGCTACACCATCACCTTCATCCTCAA
CGATCATATTATGCAAAATAACAGAACATGTCATCACCTGCCACAAAGTTTCTTCTTCTC
GCACTATTGCAGCCCCACGAACAATTCCCTGGTGCGCTTGCAGCACTCCGAAAGCCCTCT
CCACATCCTTCCTAGCTGCTTCCTGCATTGTTGCAAAGTGTTTTTATTATCTGCCATGTG
GCAGAGGACACTAGGTGGCGGAGCTGCAAGATGGACGCGCTGCGGAGGAAGAAGAGAGCA
AAATATTAAACGGATCCGACAGTTCTGCAGGGTGGATTTGGTGCAATTTGCGGTAGGATC
AGGCTGTCGGGTCCGACGTGATGGCTGTGCCCGAGCTCCCCCATATTCGCCCCATATTTG
GGCTGAAAATGGTGGGTGCCGGTCAGCTCGGGCGTTTGAGGCCGATTTGGACGCCCGTCT
GGTCGATTTTTACGACCGGGCGGCCTGACCGGATGTTTGAGGAGTGTTTAAGTGGTCCCA
TTGTAGATGCTCTTAGAGCATCTACAGGCATCGTCATCGAATCCAGTCCCTTAAAAGCCC
ACGGACATGTTCTGACCGTACAGTACTCAAAAAGCACCATCCACATTCGTGTACTTCATA
TCCCATATCCTATACCCATACTAAAGCATTCTTCGTGAATAAAAGTATGTAGATCATCAA
ACGGACATAGAATCAGACATATAAATGCACATTTTGATCATCAAAAGATCACCAGGGGAT
CTCAAAAAAACATCAAACTTCACATAATTCACATAAACGACGTATAAGTTTAAACTACAT
TACTAGAAATGTGAAATTAAAGGTGAAGACGGTTAATCTTTACCACTTTCTCGTCAGACC
TATGCCTTTCAGTCGTCAGCGCAGTTGTAGGTGCCACGGCATGTGATGGATCGTCGGAGT
CGTCGGAGGTGAAGATACGGTGGTTGTCATCGTCGGATGAGTAGTCAGAAAGGATGAGGA
GCGCCTTGATCCGACGGACGACCATGTCCTCCTACCGCTTGAGCTTGGCCACCCGATCCG
CCTTTGCTACTGCCTCCGCCGTCTCGCGCTCCGACTGCTCAATGACAAGCAAGAGCGCCT
TGGTGTTCTTCCTCTGTAGCCGGCAAGCATCTGTCTCCGCCCCCGTGAGCGACCGACAGT
AGACCCAAGCAAGGAGTGTCTTGGTGTTCCAAGTGGTGGGCCGGGCTGACATGATGGGTA
TGTCCTGACCGCTTCATATCCATCCTATATTTGAATTGAACATGAGAAAGATTAGACAGC
TTAAATGTTTGAGACCGGTTTAAGAGTTTCGATTTTTTTTCTCGCCCAGGTTTGAGACGC
GCTCTACTGCCCAATCAGAAAATCTGTCCGATCCTGCCGGTGCAGCGGACGACGACCCCA
CCGTCCACTCAACCGTCGGCATCTTGGTTCCTGTGCCATGCATCTTGGTCGCACAAGTTT
GATTGTCTTCATCCGTTGATGCCGTGATGGCCAGGATCACATCACATGCAGGTTAATTAA
GGCATCAGCTCAGTCCTTTTCACCTTTGATGGTTTACTACTACAGTTGGCCGTGTTATTC
AGCTACACGTAGCTGCTGGTGAATACATCGGATCTGACAGGGCCAAAAATATCCGGCCTG
TCTGACGGGTTTAACAACGAGATTAGGGGCGCCGTCCCTGTCAGCACAAGCACAAGTACA
AGGAATAAAATGTTCTTTTAAACACGCAAACATTTATAAACACGCATACACTCATTCTTA
CGAACACATATATATCCCTATGAGCATTTCTGAAAGATCGAGCCGGCATTTCAACTTGAA
ATTTACGAAGTTATCATAGGTGTCTCGCTGTCGATGAAAACACCTTCTTTCATTAAAAAC
GTATCGTCGGAAATTTTAAAATAATTCTAAAAATAATCTTAAAATATCAATGTTCCTCTA
ATCATCTAACAGTGGATTGATTTCTCAAGGAATAAAATGTTTTTAATCACCGTGTTGGAC
GACTTTGAGTTTGAACGGGCAACAAGGCAAGGGCTGAATTTTCAGAGCAACCGTCTCCAC
AAGATCTTTATCTTGTGCCGGCTCGGAATTTGTATTCAAATCATCTTCCAGCCTAGATAT
TTTCCCTTGTAGGGTTGGGAATTGGGACGGCTTCTTCAGCCGGTCATGATCAGTTGATCA
TCCTCCTTCCTTCCTTTCTTCCTGGACGGACGCTCTCCCTTCTCTTCTAGTATACTTTTA
GTTTATGTTTTAGAAAGAAAAAAAGTGCCTGCTTTTAGTTAGTGATGCATATTCCAATCT
AGATGTAAAGGATTTTATTCGCATCTATCTGCTTTTGGACCTTTTGAGCTTTCAGGTATC
TGTTGGCATTGGTGCTCTGTCATCACTAGTGCCCTTTAGCCTAAGCAACAGTTCATCCCG
AAAGCAACCCCACCATTAATTGTACTATATATGCACATCCATTCATTCATAGAGGAAAGG
GGAGCTTTCTGAAAACAAAATTTTCTAGTACAACTAACTGTAATTATTATCTCTCTTACT
TGAGAAAGTATCTTTTTTGCTAGTGTATGTACATGTACATTCGACAGCAAAGCAGAGCAT
GCACCTAGGCCAGATAACAGCTTTACACTTGTGGTGTAGATCCATGAGGCTGCTGCCGAT
GTAGACAGAGAGAGGTTAAGAGAGCAGGTCCCCCTCAGCTTGATTCCAAGCAGTGCAAGG
TACTACTATACTTGTACTGGTGTCTGTGATTGATTTGATTAGTAGGAGGAGTAGGATAAG
TTAGCCAGCCGCGCACCCAACGCACCTGCTCCCTCCTTCCCCAATCCCCACTCATCTTCA
TCATCATCATCAGCAGCAACCCCCACGTCCACAGTCCACACACACCCCAACGCACCCGCC
CCTGTTTATCTCCTCCTCCTCTTCATCATCTTCTTCCTCCTCTGTTCTCTTCTGCTCTGC
TCCAGCCTCCAGAGAGATAGCAACTCATCGCAAGACAAGTAACCGATCGAGGGAGAGAGA
GAGGTCAGGCATGGACAAGTACGAGCCGGTCCGGGAGATTGGGTCGGGCAACTTCGGGGT
GGCCAAGCTGATGCGCAACCGGGACACGCGCGAGCTCGTCGCCATGAAGTTCATCGAGCG
AGGATACAGGGTATGCATCTTCATTTCTTCCTGTTGCTTTGCTTTGCTTGTTGCAAATTT
GCAATCTGAAATTGATTTTGATTGATTCACCTGCTTTGTGAACGAAAAACAAAGATCGAC
GAGAACGTGTTCCGGGAGATCGTGAACCACCGGTCGCTGCGGCACCCCAACATCATCCGC
TTCAAGGAGGTGGTGCTCACGCCCACCCACCTCGGCATCGTCATGGAGTACGCCGCCGGC
GGCGAGCTCTTCGAGCGCATCTGCGACGCCGGCCGCTTCCACGAGGACGAGGCGCGCTAC
TTCTTCCAGCAGCTCGTCTGCGGCGTCAGCTTCTGCCACGCCATGCAGATCTGCCACCGC
GACCTCAAGCTCGAGAACACCCTCCTCGACGGCAGCCCCGCACCCCGCCTCAAGATCTGC
GACTTCGGATACTCAAAGGTTCTTCCTCCTCTGCTTTCCATCCATGCCATGGAATCAGTC
TACCATATATACCTGACTACAAGAAGAAAAATGGATATGCAGTCGTCGGTGCTTCACTCG
CGGCCCAAGTCGACGGTGGGCACGCCGGCGTACATCGCGCCGGAGGTGCTGTCGCGGCGG
GAGTACGACGGGAAGCACGCGGACGTGTGGTCGTGCGGGGTGACGCTCTACGTGATGCTC
GTCGGCGGCTACCCGTTCGAGGACACCAAGGACCCCAAGAACTTCCGCAAGACCATCGCG
CGGATCATGTCGGTGCAGTACAAGATCCCCGAGTACGTGCACGTCTCGCAGACCTGCCGC
CACCTGCTCTCCCGGATCTTCGTCGCCGACCCGCGCAAGCGCATCACCATGGCCGAGATC
AAGGCGCACCCATGGTTCCTCAAGAACCTGCCAAGGGAGCTCAAGGAGGAGGCGCAGCAG
GCCTACTACAACCGCCGGCACGTCGACGTCGTCGCTCCCTCCTCGAATAATGGCACCCGC
GCCGGCGCCCGGGGCGCCTCCGATGCCGGCCCCGCGGCGGGGGCCCCGCCGCCCCC