Contig Data
morexGenes
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Map Locations of contig_1565686 (3953 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1565686

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13454 1 1156 bp None Available Available LOC_Os02g44770.1, FRAME:-3, EVALUE:5e-50, 13102.m05011 protein uncharacterized mscS family protein, putative, expressed
MLOC_13455 1 295 bp AK370771 Available Available None





CDS Structure of MLOC_13454






CDS Structure of MLOC_13455






Contig Sequence (3953 bp)

>contig_1565686 3953 assembly3_WGSMorex_rbca.fasta
TCCATCTAGTTTTTATAATCTACACTATAAGTTGTCCTGTTTGGAAACATAATAGATTAT
AAAAACTGGATTATATAATCTAGATGGTTCCAAACAGGGCCTAAATTTAGTGGAAGGACT
TGGTGCACATAAATCTAAAACCTCAAATTCTAAGGAGTTCAGTTTACAGAAATTATATAA
GTTATTATGTTTTAGGAAAGTACAAAAATATGCTCTGATCTTCTGAAGTCGACACTGTGG
AAGGGAACTTGAGAAATCCAGATACAGCGGAAACCCACATCCGTATTTCTCCCCTCCTCG
AACACCACCAGACCAGTTACTCCTACAACACCGGCTAAAACCCAGATCGTGAACTCCCTC
AGCTGGCATCGGCAGCTTCCATGGGACCGGATGGCACACGATCACGACTCGAACCAAGAA
TTAGCCGGCGGTGCTTCGTGGGTACCACCAGACTGCGGCGTGCCTTTGCGTAAGATGCTT
CAGAAGACGATCCACCGCAACGCCCACGAATGCGACTTCACAGTAGCGCGAATGCGCCCT
TCCTTCTCGCACCGTCGCGCTCGCACCGTTCGCCATGAGCAGTCGCCGTCAGAATTGCCG
GGTCAAGGCTCGGGGCAAGAGGCGAAACGGCGTCGGGTTTCCGTCCCGAGGCTGGCCTAC
GGTGCGTCGAGGAGACGGCTGAAGCTCTGTGGTCTCGTTCCATTACCAGAAGATATTCAG
AGCTGGGCCAAGCAGCGTGCTTTCAACAAACAAGCAAGTTTCAGCTACAACCGCAGGCTG
CTTTCAACATTTCCAGCGGCCACAATCTGTATTGCCTATCATCAAGTGTACCGAAGCTTT
ATATATACTACAGAACACACTCATCACAGCAGGCACGCTAAACAGCTAATGGCTATCCGC
TATAGTTGCCGCTACCAGGCTGTTGTAGCAGGGTGGCCCTGGAGCTGGCCCTGGCGATTG
CCGCTTCAGGCATAGTTCCATGTCGTCGGCATCCTTGTGGACTGAAGAGGGGGCACATTT
CGCACGTTCACGTCAAGCGGCAACATCCGGTACTCGATGTCGAGGTCCTTCAGTACTCTG
ATCATCTCTTGGAGCACGAGTTCCCTCCTCACAAACCTCATGCCCATGTCCTGGAAGTTG
AGTGTGTGCCGGAGCCATATGGATACCTTGAGCTTGTTGGTCTCATCTACATCTCGGAGG
ACCACCATCGCACCCGGGTACCAATGCTCCTTCTTACCGTCAACGTAACTGGGCCACAAG
CAAAAAACAAACCATATCAGTTTGATGTGGTATATCAGCAGCAAATGGCACTACAAACTA
CATATGCGTATGTTCCCACATTGACCATACATGCCTGCCGACGACTGAATTCCACAAGTA
ATAACAGAGGAAAGTTGCCCACGGTATGTTTACACCTATATTGTCAACATGGAACTGAGA
TAGCAGAAGCACCGATACGCACCGTAGTATTCTTTCCTTCATGAGAGCCAGTTTTTCCAC
CGGCGTGGCAACATGAATAGAGAAGTCAATTCCTTCTCCCATATCAGGACTCCTGTAGAA
ATTAAAAATCGGCTTGGTGGCCAGCACACTGTTCGGATAATAGATCTTCAGGTTATCATA
ACGTAGGAAGACTGTTGTCATGATATTCATTTCCTCCACAACAACCTGAAATTTAAGTGC
TTAAAACGTCAGTCACGGAATGCAAGGGAGTATTAAACAAATAAGGAGCACCGAGAAGAT
ATATTCATTACCTGAACTTCTTCAATCTCACAGCGGTCGCCAACATCAAAAGGATGCATC
ACGAATAAGAAAATAATTGCCTCAAAAATTGTCTTCATAGTATTCCCGAACACAAAAACT
GCCACAAGAAGCTGTGAACTGATGAAGACAAAGAAATGTGTCGTCGCTATGCCCAGAATA
AGAAGCCAGAGAGCAGACACTATGAGGCCAACAACAATATTGCACATCTGGTTGAGCTTG
TTAACTGCAGTTTTTGTATCATTAAGTGTTAGGGCAAGAGCTTTGCGCTCTCTAAATGCA
TTCACCTACAGAAGAAAGCATGTTAGAAAAGGCATCTTGACGGCAAAAATCAATGGTAAC
TCTATGCAACTTAGATAGTAGGGTAATAAGATCATTACCACCCAGTTCTTCAGAGACCTC
CTGCTGACCCTACAGTGCTCCTGTGCCCCTTCAAAAAGATGCATAGCTTTGATGGCTTCC
TCCTGCCTCATGAAGCGCATCATGTCTGCCAAGTATATGTACCTGCATTATTCATACATT
TATGGTCAACAATCTGAATCAGTAAATTGCCACTATTCTAAGAACTACAAGATTTGAAAT
ATTGCAGTGAAGGCTGAGGGCAAGTATTCTTGTAAAGTTGTGTAATATGTCCATTTTTAT
GATTAACAGCGAATACAGCAGTGTACTATAAGTCTAACAATTAGCCTGCTATTTATGAAA
TTAACAGAACTGTTATATTACAGGTGTACCTCATGAGCCCAAAATTCCTACATGAAAGAA
GTTGTCTGTCTAAAATAATGCAACTTGCAAACTAAAAGATAAGGATGCGTATCTAAGACA
ACAAAGAAATGCTTACTTGGATCCAGGCTTAGCCACATTATGAAAGATCTTCTTGGCGGC
CACCTGCGCCTCATATTCGCTGCGAATCTGTGTCGCTGACTCGTCCCCCTCTCCCGTTGC
CTGCTGAATCTGCTCGTCCATTGTGGTGAGCGTCCCAAAACGAACAATCTTCATCAGCCT
CTTCATGTTCCATGCCGAGACGTTTTTCTGATTGAGCCTGTGGAGCTTGTCAATGGTGAT
CCCTTCATCAATCTCACGCTGTTTCTTCTCCTTTGACAGCTGCCTGCTCGATTGGTCTCC
CTTGGAAATTAAGCCCGAGATCCGGATGCTCTTTTGCCCCGAAAGATTCTTGGCCGGCAA
GGCACCACGTAGCTCTTTCGGGATGGTTGCGCCTGCCCGTTGCAGCTCACGCACCTCGGC
AAGCACGTAGTCTTCGTCAACAAGCGGCGGCCCAGAGAGCGTCTCGATGACATACTGGTT
GAACAATGCCTCTTGAATCCGATCAAAGTACGTCGAGACATGGAAGGACGAGGCCAGCAC
CTTGAGCAGCAGCGTCTTGACGAGGCGGATGAGCGTGGCGACGAGGAAGCAGAAGAGCAC
CTTGGTCACGTAGGGCAGCACCGCCGTGTTGGTCTCCCGTTGGACGTTCTCGTCAAACAA
GAAGTGCCAAGAGGCCAGAACCAGGCCGAGCCAGAGCGCGTTCTGCACGGCGCCGCGCAC
GCCGTACACGAAGTAGAGCACGCGCTTCCGCAGCACGAAGTTGCGCTCGACGCAGAACAC
CACGATCCGGATGACCCAGCCGGAGACGAGACGGCCGCAGATGAGCACGAACACGAGGAG
CTCCCACTTCCAGAGGTGCAGCTCCCAGACCTTCTTCCGGGACAAGGGCTTTATCGTGAG
GCTGCACACCAATGCCCCGATGATGAGCACCAGGCCGACCCACTGCAGTATGGTGAGAGC
GTCCAGCTTCCCACGCTTGAAGTCGTCAGGGATGTCGTCGTCTATGAAGGGATCGTCCTC
CTCTTCCTCCATGGGGCCCGACTTGCCGATGACCCCCGACTTGCGCCCTGAGGGAGACTG
GCCGGATTTGCCGGTCATACGCCCTGAAGGAAACTGGCCGGACTTGGGAGGCCGGGCAGA
AGACTTGCGCTCCTCGTCGACGGCAGGGGGCGCCATCGGTGACTGCGGCGGCGGGTCCAT
GAGCCGGGAGCGCGTCTTGGCTCGCAGTAATGGGCCCTTCCCCGCTGGAGTGGAAGTGGA
GGTGTTGCGTGTTCCGTCATCGCCGGCGCGCCTACGGCCGCCGGCGGGATCGGGGGCGGG
TGGAGACGAGGGGGGCGAATGGCGGGCCCTGGAAGAGGCACGCGGGGGCTACC