Contig Data
morexGenes
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Map Locations of contig_1565678 (3689 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1565678

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13452 1 1021 bp MLOC_13452.1 Available Available LOC_Os01g64760.1, FRAME:-1, EVALUE:4e-113, 13101.m06980 protein Yip1 domain containing protein, expressed
MLOC_13451 1 190 bp None Available Available None





CDS Structure of MLOC_13452






CDS Structure of MLOC_13451






Contig Sequence (3689 bp)

>contig_1565678 3689 assembly3_WGSMorex_rbca.fasta
CCCACCGCCGCGGCGCCCCCCCTGCACTCCCGGCCCGCGGCGTTCGGCTGCTCCTCGGCG
GCCATGACGCTGTCCGCCCTCCTGCGCCCCGCCTCGGCGCCGTTGCCGTCGTCGTCGCCG
CCGCCGCCGCCGCCGCTCAGCTGGATGAGCTGCTCCGCGGCCTCCATCTCCACCGTGGTC
GAGGACGCGGCCGGCAGTGCCTCCACCGCCTCCCCCATGACAGCCCTCCTCCGGCCCGAA
GAAATACGGAGCACGAGCGGTGGCAGATGGCCGGGGCAGCCGCGAACGGCGCGCGCGCGC
ATATATATACGTGCTTAAGTATAGGAGCGACGACCGGACCGCGAGGAGCAGGCGCCAAGG
AATGACCCGGAAGGTGGCAGGAAGGAGACCCGTGCCCGGCTTGGTTTGGTTTGGCTTCCC
GTTTAGCCCTTGCTTTGCTTCTACTCTTCGTGTTTGTTTTGGCTAAGTTTAGCCTCCCGT
CTATTCCCTGTTGGCTGTTGCAAACTTGCAATAGATAGATAGATGGATGCAACGCAAACG
CCTTCGAAACTTGACCGCGTCCGGTTGGTTACTTATTCCTGGCATGTACGCATGCTGATG
CCGACAGGTCGGCCTACCGGAAAAACTAACAGAGACCCACGGATCTCAGGGACCGCGTCA
ACCCTTCGTATTTATCTGCTAGAGTACTACTAGCTAGTTTCTGCTGCACGGAGAGATATT
GCTCTGTCGGTGGCCATGTGTGCAGTGATTTTCTACTTGATGAAATGGACGTTTGCATCT
GTGAGCACAAGTGTGATTTTTTTTTCCAGGAGTCATAATTCAATGACGACTTGGAGTCAA
TGTTGGTCAAGTTTGTTTCAGAAAATGTTGGTCAAGTTGCAGAGTACACACGGCGAGACT
AGAAATACAGCAATGGAGAAACTCAAGTGACCAAACAGTCCATGCACCTCCTGTGGCACC
TTAGTTGTGGTGATGAATCGCGTGGCCGTTTCACCACTTTCTTATCCCAATACACAGTTA
CCGGATACATCAATGAGAAATTCCACGAAGCACCCCTGGTCAGGCAAGAAACTGTTCGAT
CGCAACAGCGAGCCAAAGCCCCATCAGCAGCGTACAGATTATTCCAGCCAGGTGCAAAAC
AAAAGAGGTGCCTTTTATTTACAGCACGTATAATTTCCTACTGGATTCTAAGTTTCTGAC
TATACCCCTACCACGACCTTTGGTTGTGTAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAA
ATACAAAAGTAGAACGAGCAAGATTTATTTACAAAACAAGAGTCACACAAAACCAGTCTC
CACTCCGGCAAAATCTTCGGACTTCTGAGAATGCGCGGTAGGAACCATTCTGCCCCTAGT
TTATTGCGATTATGAGGAAGCCAATAGAAACGTACATGAGGAAGACGGGATAGAGCGCCA
GGGCCTTTCTCCTCGGGTTGACGGCGGTGCTCATGAATGGGTACGCGGCCCAGGAGCTCC
ATGCTAGTGTTACTGCAACTACGATGACCTTTAGCATGGAGTTGTCCTTCATCAGGCAAA
TCAGAGCTCCGACATCCAAGGGGAACAAGCAGTATCCAAGAAGGCTGAGGCTTTGGAAAA
AGATGATTTGGCCACCCTGCAAATGAAACAATGTGGTCATTGCCCCCAAGACCAAGAGAG
CAGGTAGCAGCAGGAGTGTGTATGTGATGGTAAGGGTTTAAGTACCAGAAGAAGCACATT
CAGCGTGAGAATTATAGCACCGGCGGCAAGTACGGCAAAAGCAACAGCAAATACTTCAGA
CTACAAAAACAAAAGCATGTAATCAAAATCAGTATGTGATACATCATTGTCAAATGAAGA
ATTAAACAAGTGAACTGCAATCATAATCATAGGATGAAGATTAGTGGATCTCCAAGGATA
CTGGCATATACGTTAACGCTCTACTGAAATGAACATCTCAATTTTTCCACTAAAATGAAA
TTAATTCGTTCTGGGCGTGATTTTGTTTGTTGCCAACGGAAGATTTACAGGAACATCAAA
TGCCTAGTTACCGAAAATGGTTCACAGTGCAGCATTTCTTATTTTCACAACAGGGCTCCC
TCCTGAATAACTTTCCCAAACACTTGGCCTTTTACTGGACCTCATGAAACATCGCAACAT
GACAAACATGCTACCGAACTGGAGATGCCATAAAAGAAATTAGTGAAATGGCCATGACCA
CCTATCAAGGTTCAGCGGGCACATGAAAATAATTATAAGTATAGACGTGTCTCCGGTACC
TTTTTTCACAAGGAAAAACATAGTCCCCTTCTAAGAATATACTACCTTCCAGATTTAACA
ACACCATCCCCCAAATTTCGCTTTATTCCTGAATAAGGTATATGCCATGGAATGACTCTT
TAGCATCTTGAGAGTGCTCAAGCCCCCTAGATCAATAGGCTGATAGCATTGCAAGTTTGA
CTCCAGTAAGGCAGTAGAAATTATACAAGAGCATGCCAGGTGCAAATAGCAGGCAGTGAA
GAAATTTCACTACTCTTTATGCTCTTTTATTCTTTCCAAAAGTTCACTTCCAATTAACTT
TGTATAAGGCTCATGCTACAAATAAGAGTGTCACTGAATATCTCCATATAGCCTTTAACA
CTATTGGGTTTTTAATCAAGGATGTGCTATCCCCTGCTTCAGCTACCATGTATGCAACAG
CAATGATAACGTAAATCTAGTTTGCCTGTAACGCTTTTGCATTTGAGATATAATAATAAC
GAATAAACTGGTATAGCTAATAAGGGTGCTACCCATCACCCATGCAATTAACACGTACTA
CATGTGCTATCAGAGCCTAGCCTCCAAGGACCCAAGAGAGAACCAAGGCTCATAGGGATA
TACATAAATATTACTGTAACTAGTATAAGCACAACATGGCAGCAATCCAGGACGTAGCAC
CGACATTAGGTTAGGTCAATGAGGCATTGGAGATTCTGGAGAGGCTCCAGTCCTCCAACT
AACATGTTGGTCAATCCTTCATAGCACTTTATGAAACATTCATTTTTTAGTGACAATATT
TTCACCTGGTCAATGTGGGGCCTCATAACTTAAATCCTTGAGGTTTGTAGTATTAATGTC
CTCTAACTAAAGCATTTCAAATACTCCCTCTGTAAAAAAAATATAAGAGCGTTTAGATCG
CGATCTAAACGCTCTTATATTTCTTTACGGAGCTATTAGACACTCTTATACATTTCTTTA
CGCAGGGAGTACTACATGAGTTCACCAACTAATTGAATATCTAAGGATTTGAATTTCACA
TAACCCAGAAATTCCATATTGATGAATTTGGATTTCACATGGCCGAAGAAATGCAGCAGC
TACCTTCCTGACTGAAGCCGACCAGGAGAGGGTGAGGCCGAGGAAGACGATGAAGAAGAA
CGGGCCCCAAAGATCCCAATCGCGGAGCGCCTTGCCTGGGTCCTCGCGGAAGGGGTTGGG
GAAGACGACGAGCTTGAGGTTGCTGACGATGCGGGTGAGGTCGCGCTTGACGGTGTCCCA
GACGGGCTCCGTGAGCGTGTTGGGAGGGGACCCGAACCCATCGGAGGCGATGGGAATGGA
GACGGAGGCGGAGGGGAGCGGCGCGGAGGAGAACGTGGGGCGCGGCTGGGGGCCGGGGTC
CGGCGGCGGGGGGGTGGGGGGCGCGGGGG