Contig Data
morexGenes
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Map Locations of contig_1565643 (4261 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1565643

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13434 5 3672 bp MLOC_13434.5 Available Available LOC_Os05g41950.1, FRAME:-2, EVALUE:0.0, 13105.m04462 protein protein kinase, putative, expressed
MLOC_13433 4 531 bp MLOC_13433.3 Available Available None





CDS Structure of MLOC_13434






CDS Structure of MLOC_13433






Contig Sequence (4261 bp)

>contig_1565643 4261 assembly3_WGSMorex_rbca.fasta
CCCGGGCCCGGGCGCCGCCCCCGCCCGCGGGGCGGGGGGCCGGCTCACCTCCCCCCCCCC
CGGCCCCCCCCCCCCCCCCAAGAGGCTGAGGCTCAGCGAGGTATCCTTCCCTGTTCCCGT
CGCCAGTCTACGGAACGGCTCCGCTACCCATTATTTTCCTCCCGGCGCGCCGTCGTGTGT
CAGGTGGGCAGCCGTGGCTGTGCGCGGCCGCCGCTCATTCTCGCTCGCCGGCGTCGGAAG
CGCCCGTGCTTATCTCCGTCCTCGCTGCTTCGCGGGCCGAGCAGGTGCGCTCAGATTTCT
CCCGCTCTACTGTACTGTAAACTGTATCGACAATTCAGGTATATATGGGCTTAACTGACA
TAGTGACATTGGAATTAGGCATTGCCAGGATTAGTTCCTGAGCATTGCTCGTCACAGCTT
ATTGTTTCGGACGGCGATGTGCGCGCTGATTTATCCGAATTGCGTGGTTAGTTTCGTCTC
TAAATACAGAAAATGGCCATACATCTGAAGAAGCACGCCTGTTTCGCAGTGACTCGTACG
TAGCTAATTACTTGGAGTATGTTAGGAACTGTGTAATGGTTGGTGCAGGGGTAGCAACCC
TTTTAAGAATATATATATAGAGTTGTTACTACAAATAGTTTTTCTATAAGTGGGGGAAAT
CTGTACCACAATTAGCATTGTTTGGTATATTCTGACTGCAGTGTAGTGGTTGCACACATC
GTTTCATCTCATTTCTACCATGTCAGATGTGCAACCGTTTCACACTGGCTCTATCTTAAT
TTTAGTCTTCTTCAGGCAGCTAAAACCGTCAAAGTGAATGTCGCTGATCGCAATTTAGTG
AATTGGCCAAACCACTGGCTCAGTTCTTGCACCAGGATCTGCTGAAAAATTGGTTATGCC
TAATCAAAGAACTTAAGTCAATCTCATTCAAGAACATCATATGATGTTACGTCCTTCCTA
TATGTGCTGTACATTACAAACAGAGATACCATACAAGGCCTGCGGCGCCTCCATCTGCAT
CCCTACAAACCTTGCTGGCTTGTTTTACCATCTGCTCGTCTCAGAAGCCATTTTAGCTAT
CCTCTACTTGTTTTTCCTCAAACCCGCTTAGGCTAATTTCAGCTTCTCTTAGGCTAATTC
CTTTGTCGTAGTTGGGAACTGATATAGGTAGAGGCTCAATGTCATCTGGAGGGTCATAGT
TTGGATCAGCAAGAAATGTAAGGGCCGTCACCACATCACTGATTAGTGGACGACTGATTG
CTTCTTCTTGTAGGCACATTGATGAAATTGCAAGTGCCTGGTATAGACCTTTCAGGGGGT
ACTTGCTGTCAAGCAGTGGATCAGCCATCTTGGTAAACTTCTTCTTATCCTTGAAGAGTG
GTGCTGCCTGCAGATATAGCAACATCTTAATCCCAAACCGCATGGGCAATCTTTATATCT
GAAGTATGAGCTATTTTATTTGATTATTACAATCCAATATGACTACTAAGTTAAAAATTT
AAGGCTATAATATTTCTTGATAAAGTAGATGTAAATCTTACCCAGTGGACAAGAATTTGC
TCGCGAGTCGGTTTCGTGGTGTCAATTGCTCGCCTCCCGGTGATGAGCTCCAAGAGAACT
ACACCAAAGCAATATATGTCTGACATCTTTGTTAACTTGCCACTCATGGCGTACTCGGGA
GCGCAGTACCCGTACGTGCCCATCACCCTTGTGGTGACATGAGTTTTGTCGCCGACTGGA
CCAAGCTTTGCAAGTCCAAAATCTGCCAACTTTGCACTGAAGTTCCCGTCCAAGAGAATA
TTTGATGCCTTGAGATCGCGGTATACCACCGGCGGATTGGCCACCTCATGCAAGTACTCG
AGGCCTCTGGCAGCATCAACTGCAATCTTCATCCGTGTATGCCAGGACAGCGGCTGAGAT
TTTGGAGTGAGATCTGCAGAATTCAATTACCAAATCACCGTCAATACAAGATCATAATTT
CTGATCTTTCGATTCCATGGAATATGTTTGAGGACCACAGCATTGTGGTTCTGTATTACT
ACCTAGGAGATGATCTTGCAAAGAACCGAGTGGCATATACTCGTACACTAGAATCTTTTG
GTCACATTCGGTGCAGTACCCAAGCAAGGTGACAAGGTTTGGGTGATGAAGGAGGCTCAG
CATCAGCACCTCGACAAGGAACTCACGGTTCCCTTGCAACCCATCCTTGTCCAGCTGCTT
AACCGCTATGACCTACGTATGCACATAATTTACATCAGAAACGTGTTGCTGCTGTATGTG
GCATAGCATCTTGAGGTGCCAACTTAATGAAACATAGAATAGGAAGCTGGGAGAAGGAAT
GCTTATTACTTCCATGGTCTCCGGAATGTATCCTCTGTACACCCTCCCAAAGCCACCTTC
TCCCAGGAGATTCTCCTGGCTGAAAGAATTGGTCGCGTCTGACAGCTGACTGTGCGTAAA
CACTCTGCTAGGAATGTTGTGGTTGCCGATCCGTAGTATTTCCCCTGCCGCAGCCCTGGC
CTTGGGACTATCTGCATTTAATATTTCCGCTCAGTCAAAAATGCTTAGTTAATCGCAGAA
ACATGAATTTCTAATCCAGGATTACAAATTTCAGGGTGAAAGTAGGTCCAAGAAGAGGGC
AATGCACAGACAACTTCCGTGAACATTACTAATTTGTTGTTACTATGTGTTTGAACAAAA
AAAAATCTCACCGCCAGATTTCTTAAGTAAGTACCTGAATGCTCTTCATATGTCTGTGTT
GGGCAAATATTCATTGATAAATTGATATTGACATGCATTGCTGAATTTAGTTTCGCTGCA
AAGATGGATAATGAGATGATGGAAGGCATTACTTGCGAGTGAAATCTCTTTCACAAGGGT
GGCCAACTGTTCGTTCTTGGCCTTTTTCTTTTTCCAAATCTTGTTCTTGAACCACCTTTT
CTTGTCTGGCTCGGAGCTCGCTGCCACATTCTTCCGCTTCTTCTTTGTCTCTGATGTTAA
CGGCTCCTCAGCTTCATGTGACGCCATGCCACAAAAACCGCGCCCCCATTTCCTCTTTGT
TTTCTTTGTCTCTGATGTCAACGGCTCCTCCACTTCATGTGACGCCATGCCACAAAAACC
GCGCCCCCATTTCCTCTTTGTTTTCTTTGTCTCCGACGTCGATGTCTCTTGCCCAGCCTC
CCTCTTCGTCCTGCCGCAGACACCGCGGATCCATGAACAGCAGCACGCGCAGCTCAAGAT
GCGCATGCTGCTGCATCTCACGGCGCGAAGACCACGCACCCACGAGCAGCAGCACCCCAT
CGAACTGCAGCGAAGACCACGCACCCACGAGCAGCAGCACCCCATCGAACTGCAGCGAAG
ACCACGCGCCCACGAGCAGCAGCACCCCATCGAATTGCCGCGAAGACCACGCGCCCACGA
GCAGCAACACCCCATCGAATTGCTGGATCGACGCGAGAGTGGGCTAGTACTCTCGTGCCG
ATCATTACGATCACCGGATTAGAATTTTCACCGGCGGTAAGAAGGAGCGGCAGGAGGCAC
AGGTGAGCGCACAATTTTTCTCTCTATCCCTAGTCTCTCTCACCCGAAGGATGCGGCGGT
TTCCTTTTCCCTTGGAGGCTTGCTTGGATGATGATAGGTCTGAAGCCAAGTAGCCATTTT
TGGACTGTTCTTTTTTCCTTCTAATTGTTGTCATTTTTAGCTAGGGATATTGCCACGCCC
TCCTTTTCGCATGCAAAATATAGGCGTCTGTTCGCATTCAGTGGCTGACAATGAGCTGAG
ACATGTAGCGCATACTATATATAGCACCAGTTTTGTTCTTTTTTTGGATGGAGAAGCTTT
CCGTTTTGCATTATTGTTGGGTTTTACCCTAGTTACATGAAAAACTGCAAGCACACGTCA
CGTTTATTGTATAACTAAGGTGCATGCATGCCCAAGCACCATGCGAGCTGCCAGAGTTCT
ACTACTGGCTGGCCAACAGGCCGCCGCCGCCCTCCAGCCGACACATTGCCGGCAGCTGCG
CCGCGAGCTGCTGCGCCTTTGCTACCTTTAGGCTGGCCGACGGCTGCTCCACGCTAACAT
GGTATGGGCTGCCGTAGTACAACTCGTTGGACTGCTGACCATGGTGCAGAGACACGGTGG
TTTGCTGGCCAGGGAAACCGCAAGGCTGCTCGCCGGGCTGCTGACCCTGATGAGGGGAGA
CGGTGGTTTGCTGACCCTGATGAGGGGAGACGGTGGTTTGCTGACCCTGATGAGGGGAGA
C