morexGenes - Barley RNA-seq Database

Contig contig_1565523

Source Contig contig_1565523

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1565523 (1289 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1565523

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_13393	1	686 bp	AK369558	Available	Available	None

CDS Structure of MLOC_13393

Contig Sequence (1289 bp)

>contig_1565523 1289 assembly3_WGSMorex_rbca.fasta
ATTAGTTAGTTAGCTTATTATTTTAATAAATTAAAATAATTATAAAAAAATTAAAAGCGT
GTGGTATTTTTTTCTCCCGTTGCAACGCACGGCCCGTTTGCTAGTTAACAAAACAGGCAG
ATGTAGCAGTTGAACTTTTAAATGGCTAGCAATCTTGGCAAAATTGATGTGTCCACGAAA
GTATTTCACAAACTGAACCGCGTTTGAAAAGAATCCACGCAGCTGACCCTTTCGTGTGGC
GCCGGACAGCCAAACGCTACACTGCACTATGTGACGCCTTTGTCTTAGGTGCCACACAGT
ATAGTGTGGCACCTATGCCTTAGACGCCACCCTAGGTCTCGGGCGTCACAAACGGATGAA
TTTTTTTTCATGAACAGTTCATTTTGTGAATTGGTTGCGTTCTTTGGTCAAAAAATTTCA
TTTTGGCAGCAATCTGTACATCCCTCCACGTTGCAGTCTGACGCCCAAACTGATCTCGAA
AGGCATAACGCAGCATTGCATTATTCAGCTCAATTACACAAAATGCTTCTGAAACCAAAA
TTCGTATAATTATGACCTGACATGCTTATGCCACAGGTCGAGGAAAATAGAGGATGAGTT
GGAAAATGTTCGAAGCAGACATCATCTGGTCATACAGATACAGTAACAAGAGTTAACTTT
ATTCCTCAGAAAACTATCTGAATCGACCACATTACAACAATGTACGTACAAGTGCTAAGT
TTAAGGTATGCACATCAAATTGTGCATGCTCCATACCCACACCTAAGGTGATCTCAAAGT
GTCGAAAAGAGGGTACCATAATGAAATGCAGGGGAAACACACAAACATGATGCCGTATCA
TTCTTCAGTTTCGCTGTGATATTCACCTCCAATGAGCTATTCTACATCAAAAGCACCCAA
CTCCATCCAGATTACTTGGGATCATCAGGTGTCTGCACGGAGATCTGGTGATGGGAGTGC
ACCCCATTCGCCACCGGTGGTGCGGCGGGTGTGATCTCTTCATCTTCCTTCTCCTCATCC
GAGTCCAGCGTAAACTGAGATGACAATGGCATGCCCTCCATCTGGACCTCCTTGTCCAGC
ATCCTGTACCCGCTGGGTGGGCTGTTGTTCCCTCTCGAGATGACAGCAGCGTACGTCGCC
GCCCCAGCGAGCACGAGCAGCGCCAGGTGGCCGTTGAACTGCAGTGTGGCGACGGAGCGC
GCGCGGTGGTAGTCCTCGTGTGTGCGGCACTTGATGGTGTAGTCGGCCCGGCTCTGCGCG
GGGGGGGCGGCGGCCCCCGCGGGGGGGGG