| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_1565296
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_13292 |
2 |
783 bp |
MLOC_13292.1 |
Available |
Available |
LOC_Os05g46610.1, FRAME:+2, EVALUE:9e-32, 13105.m04980 protein myb-like DNA-binding domain containing protein, putative, expressed |
| MLOC_13293 |
1 |
645 bp |
MLOC_13293.1 |
Available |
Available |
LOC_Os05g46610.1, FRAME:-1, EVALUE:3e-26, 13105.m04980 protein myb-like DNA-binding domain containing protein, putative, expressed |
CDS Structure of MLOC_13292
CDS Structure of MLOC_13293
Contig Sequence (6989 bp)
>contig_1565296 6989 assembly3_WGSMorex_rbca.fasta
CAACACCTAGTCGACCTCCGGTGCCTCGCGGAGCTCCTTGACTAGCACCTAGGCTGCAGC
GCCTCACCAATCTCCTCGTTCGGTGCCTCGCCACGGCTGTGCCTCTCAGAAACGAAAAAA
CTTGTCCCTGTTATTTTTTTTCTGAGAGGTACAGTTTTACTTCAGCGAGAAATACGATTT
TGCGTTCGCGAGGGGCACGCCCGTGCCTCTCGAAATCGGAAAAAAACGTGATTTTTTTTT
TGTGATAGGCATGATTTTTGCACTCGTAAGAGGCACGATTTTTCTTTCGCGAGGGGCACT
ATCATGCCTCTTGATAACAAAAAAAACACGTTTTTTGTTGCTTTTTTTTACGAGAGGCAC
AATTTTGCTTCCGCGAGAGGCATGGTTTTTGTTTTGTTAGAGGCACGCTTTTGCCTTCGT
AAGAGCACGGCCGAGCCTCTCGAAAACGGAAAGATACGTATTTTAGAAAAAATCTATCGC
GAAAGGCGCGGTTTTTCTGTCCGGTTTTGTTCGTCCCGGTTGTTTAAGTAACTTTTTTTA
ACAAATCTATCAGCATGGATCTAGTTTTGAAGATCTCGATGCGAGTAACTCAACGGCAAA
AAACTTTTAAGATTTGGACGCACAGTTTAAATGATAAAACATTTTAAAAATACGAATCAA
AAAATATTCAAAATTACGGCACTTGTCACAATTTAGAATGGTGAAAGTAATATTTACAAT
AAGTACTCTTGAATTAGTGATTTCTGCATCGGCCTTACTGCACTCACCCGTTTCTTCTCT
TTGTGCCGATCGAACAAGACACGACGCTAACTCGCTCGCTAGCCCTGTTTGTTGCGTGTG
TTTTTTTCTTTGCTTTTTGCTGATTGGATTGGTCTGTGTTCACCGTGTTTTTTTCTTTTT
ATTCTTTACTGTGATTTCCTTTTTCACTGGTTTTTTCTCCTCTTTCTTTTCATGTGTGTT
TTCTCTATGGTTTTATTCAGTTTTCATTATTTCTTTGATCTTTCTTTTTCTATTTTTGTA
TAATTGTTGCCGGTTTTCGTTTTTTAGTTATTTCTATTTTCATGCATTTTATTTCGTTTT
GTTATGGTTTTCACGGTTTTACCTCTTTTTTCTTTGGCTTTCTATATTTTTTGCTGGTTT
TGTTTTGTTTTTTATCTTCCTTTTGACACATGTTTATTTATTCATACATACTATACATTT
TCCATACACCTCAGGAACATTCTTTTACATGTTTACATTTTTCAAATATAGTAATATTTA
AAAAAATATATGTTTCAATGCCTACATTTTTCGTATACAGAAGGAACAAAATGTTATATA
TGTTTAACATTTTTCATGTATATGATTTTTTTCCAAACATATGTTCTGATGTCTATTATT
TTAATACATGTCGTACATTTGCTTACACATATGAAACATTAGTTTTATACATCATTATAA
ATATAAAATTCCTAATTAATATTTTTTAAATATATATTTTGGTTTCTACTTTTACTCATA
TACATTGCAAAAATAAATACATGCAGACTTGCAGTACATTTTCCAATAAATTTTGATGTC
ACCTTTTTCATACATGCAGACTTGCAGTACATTTTTTTATACATTAGAAACATTTTTCTT
GACAAGTCTCAAATATGTATGGAGTGCTTTAAAATATGCATGGACTTCAAGTAGACATAA
GATTTTCTAACTTCCATAATTAAATCATATTCATATGATGCCAAGACTAATCACTATGGA
TTTTACAAAATGCAACTTTCTGTAACGAATGTTCATTTATACCATATTAATCATTTATAT
GTAAGAAATGAACATGTTAAAGATAATTAACATGGCAAGCATATGCATGACAAGAATGTA
CACATTATGTAGTGCAAAACTTACATAGGATGCAAATGCATAAAAGCTATATGTCAATGG
CTATCATCATGCGAACTTTGTAAGTTTTAACAGATTATGTCAGTATTATGATGCACTTTT
GTAACATTGTTTTTATCAAAGCAAATTGATTCTAACATAGTTTTAAAATGCCACAATTGC
GTAGAACACAGAAAAATGCATAACATTCATATAAGACACGTTTTCATCATATGCACAAAT
TAAAATTTACAACGATTTTAATATAAGGTAGTGTGGCTCCTTTGAGCTAGACACTGCACA
ATCAAGAGTGGGGCCTGGGGTGCCATGCTGACCAGGTGTATCACGCCTGTCGGTAAGGCA
TTGCATAGTTTAGTGCACCACCTAATTGTCGGGCGTCAGACAAAAGGACGAGCTGAGTGC
AAAAAAATAATACATGGTTCACTTTATGAAATTGTTTCGCGCATAGGTCAATTTTGTTCA
TTCTACCTCAATCATCTCCCATTGAGCACAAACTCCTGGATCTAGTGTTAGTTTTCCAGA
TCCAGAAGTTGTTGTGAAGAGTCTTATTGACCAAGCACGTCTTTCATTTATATATGTTGA
AAATCTTGGTCTTTTTAGACCGGAGGACATTTAAAGCATCTACAACCGGATTCCTTAAAT
GACCCCTCATAACTCTGCGGACGCGCCCGATCAGTGATCGGACATGAAAGAGAAAAAAAA
TGACCCAACCAGATTATCGGCGAACTCTCATATCAATCTTAAATATGAGAAGAATAAAAG
GGCTCACGGACGCGCCCGGCCACACCCAGTCAGTGCGTCATATAGGAGGTAACCCCACCC
TGGATCACTTTTTTTTTCCTCTTTTCCTCTTCACCAATCATGTGCGAATCCGAACATATG
AAGAAGAAGATGAAAAATATGGCTGTACAGACGAATAAATAAGGAAGATGCCCCGTCACT
AACAAGGTGCGTCCGCAGGAATTTGATGGCCTGAATTTACAAGTCTTACTTGAAGATGCT
CTTATAGCCTTAATCATGGACCCGAATAAGAGATCTCTGCCATTGTCGCTAGAGGGCATG
CCGGGTGTTCTGAGCCGCGCTCTGCAAATGACATAAAGTCTACAAAAATGCTAAGTATAC
AAAGACTTATAAAGGGTTGCACATTGATTAGGATTTTTTCTTTTTAACTAACTTCTTTCC
TCCCTCCTGATTTTCAAGGGGATGGGGCCCTCATTCCCCTTAATCTCTAATTAAATTCAT
TTGTTGTAGAACTTGTGTAAACTTATGTATGTGTAGCATTACTCCAAAGTCTATGCCGAG
TTCTTTTTTATATGACCGACTTAGCCTAATGTTTTCTAGTATATGATACTTAAAATAAAG
GATGTATATAACGAGCCTCCAATGATTTACACCCAACATATGACAATACATCAACCTCTT
CGTTTCATAATATAAAAACGTCTTTAACACTAAAATCAAGAAATCAACAGGGTAAAAAAT
ATACAGGAGAAGGAAGAAAAGATCAGACGTATCGTTCCAGGTTGAACTCAAAACTTGCGA
GGAGGCTCTGTTCTTGGCATGGCAGCGAAAACTTGTGCTCCAGCGCCGCGTCGTGCTGCC
GCTCCATGTCGGCGAAGGCCGGCCCGCCTTGGCCCAATGCAGCACCTCGCCGTCCTGCAC
GCTGCCCACCTCGCCGCCGTAGTTCCAGTTGCTGCTGTTGCTCGTGGTCTCTCCGTAGCC
CAGGTTCTCCGACGCGTCCAGCGCGCAGCTGTAGTTGCCGGCGCCGAACCCGGCGTCGTC
GTCCGCCGAACTGGCCATGCAATGCCTCAGCGTTCGCCGCGCCGACGTCCCCGGCGAACC
TGCTGCCGTACTCGGCGCACACAGGGAAGGGGTCGAACACCGCCGGCTGCTTCGGACAGA
GGCTGCCGTCGGCCGCCGCGGCATGGGGGTTACGGTTTTTCTCTTCCGCATCCGGCAATG
CCGCTGTGGCCGTGTCCGCGGAGGCCATGGGCTTGTGCGTGGCCGGGTCGACGACTTGCT
GGCGGAGCTTCTTCTTGATGCAGCTGTTCCAGAAATTCTTGATCTCGTTGTCCGTTCGGC
CCGGCAGGTGCGACGCGATCTGAGACCACCTGCAAGCACACACGCATCAGCATGTTATCC
CAAATTTTCAGCCCACTCACCTGCTCGAACGCAAGTACGTATGCGTGGTTGCAGGCAGCA
GGTGAGGTTCAAAAATGAAGTATAATTTGGCAAGTTCGGACGTGGTCTTTCTCAGCTCAG
ATGTCAAATGAGCTTGGATGAACAGTAAATTTTAGAAAATATAGTATGGTTTAAAATAAT
GTTTTTTCCTGTGTAAACAGTGGCACAGTTTCGAGTGTTCACGAAATTTCATCATGAAAT
GACATTCATGGAATTCGTAGCAAAAAGGAGATTTGATATGCTTAAATAGTGTAATTTTCG
AAAGCATTTTGGAGTGCTTATTTTGTTTTTTATTTGCCATGATTTCTAAGAATGTTAAAG
TTCGAAAACATTATGATGAACTTCTGCAAACAGTGAAAACATTTGTCAAAGTTTGTGAAA
GAAATCACTTTTTTTTTTGTTCTCGTTTTTTTGGGATTTAACCGTTCGTCGCGAGCTCAA
ATGAGCTTGCGAGGAGAAGATGGTGGACTTTCGGGCAAGTAGCAGTAGTAGGAAACTAGG
AGTACGCGAGCGTACAGATGACGAAATAGAAATAGCATGCATGTGACAGAGTCTGTAGCT
GGAGTTTGTAAACATAGCTGGGGAACACGAGTACATGACCGGCTCGCTCGACGCGACCAA
GTCTAGGCGGGGAGGTGATATGAGGTTTGTCAGACCCTGCTGGCGGCGCCGGCACGTCGG
CGGGAGGGGCCTACTCGTCGTCGGGCCTCACCTACGCTTCTCCCATATATACCAGGCAAC
CATCGATGAGGAAGGAAGCAACCGTCGCCGTTGGCTAGCTTAATTAGCTCGATGGTGGAA
GTAGCTACAAGCCTACAACTACAAGTCGTCCGGCGGCGTGGGGCAGCCAAAGCTCCGGAA
GGGGCTGTGCTCGCCCGAGGAAGACGAGAAGCTCTGCAACCACATCAGCCGGCACGGCGT
CGGCTGCTGGAGCTCCGTCCCCAGGCTGGCCGGGCAGCACCGTGCACCGGTGTGGCAATT
GGCAAGACGTGCCGCCTCCGGTGGCTCAACTACCCTCCACCCCGACCTAAAGCGCGGCTG
ATTCTCGAAGCACGAGGAGGGCCTCATAGTCAACAGGTCCGTCCGTCCGTGCAATGCATG
CATCTAGGTCATATTAATTTCACAGTGCGAAGATCGATCAAGCTAGCAGAAAGATTTAGG
AGAAAACATACCGAATTACTGATGCGTGTGGTGGTCTCAGATGGCGTCGCACGTGCATGT
CCGTACGGACAACGAGATCAAGAACTTCTGGAACAGCTGCATCAAGAAGAAGCTCCGCCA
GCAAGGCCTCGACCCCGACATGCACAAGGCCATAGCCACCGCTGACACGGCTACGTCGCA
AGTAGCCGGCGGTGTTCGACCTGTTCCCGGTGTGCGCCGACAACCTTGGTGCGGCAGCAT
TATACGGCCAGTTCGACGGCGGCAAGGATGGCGCGGACGACGGTGCCGGGTTCAGACTCT
GAACTTCAGAGCCGCAGACTACAGCTGCGTGCTGTACGTGTCGGAGAACCTAGGCTATGG
GGAGAGCTCAAGCAACAGAAGCAACTGGAACTACGGCGGCGAGGTGGGCAGCGTGCTCGA
CGGCGAGGTGCTGCACTGGGCCAAGGTGGAGATGGAGCGGCAACACTCACCGCTGGAGCA
CAAGTTCTATCTCGCAGCCCTGCCAAGAACAGAGCCTCATTTGGACTTCAACTTGGAATA
ATACTTCTGACTTCTTTCTCCCTCCATTAGATCGCAAGTTGGTGTTACATCGGAAGTTCG
AGTAGTAATTTGTAGCATCAGTGCCATTTTTATAGGCGAACTGGTATGCGTCCTGCCAAA
AATGCTAGACATACAGAGAGTTACATAAGGTTACACGCTGACTAAGATTTTTTCTGTTTA
ACTAACCACTCCCCCCTGATTTTCAAGAAGGGTGGGGCCCTCATTCTCCTTAATCTTTAA
TCAAAATCCACCTATTTGTAAAATTTATGTAAACTTATGTATGTGTAGCATTGTTCGCTT
CCTGCAGCATGCTGAAGACAGACGTATCGTATGAACTACCAATTGCGAATCATAGCAAAC
AAACTGCATGTGAGCGGGTTCTACCAAGATTTAATTACAGCACGTGCGTTACAACATGAG
AGAAAATAACATATTTTTTTTAGAAGGAGGAAGCGGGCCCCCGGTCTCCGCATAAGAGAA
AATAACACATGTTCTTAACTGAATAACCATGACTTATAAGAGCTTAATAGGTTCATATCT
TTTAGTTCCACACGTTGTTGCCAACAGTGGCATCAGTGCTTACACAACGAAAATAAGTTT
AAATGTGGTCAGTCATAAGGTTTCTTTTTTTCTCTCTCTCGCGCGAGCTCACGCGCCCAT
GCTCTTTCGGAATAAGACGAGAAATATGTTGTTTTTTCCCACGAGGGCTTTCATAAGTGC
ATATGTGGTTCTAGATGTTTTTTTCTTCCAATCTAGTTTTAATGGATGTTTATTTGCAAT
TCGGTCCATCGACGGTACGAAAGAAATATAGACCGTGCACTATAGATTAAGCTTGGACCA
AAAATAATATTTTAGAAATATATAACAGCTAAAAATAACATCATATTTAAATTCTACATA
TTTTTTGGATCAAATTTCATATATATAATATGCTAAAATGGGATTTACAGTTCAAAATAT
ATGAATAATTTTGTTTAACATAAACTGCTGATTAATTACCCGATACATTTAGAGGTTTTC
TGTAAAATAAAACAAAACAAAAACGGTACGGCTGACTAAGATATGTACGACGGATTGATT
ATCTAAATTCTCGGGGGGGGGGGGGTTTTTTAGAAAAAAAGGGATTGGTTTTGACTTAAA
GGGGAAAGGCGGGTTAATTTAAAGAAAACTGGGGAATTTATTAATATTATGGGGTGCGGA
AGAAAAAAAAGAATACAATATTTTATAAT
