Contig Data
morexGenes
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Map Locations of contig_1565237 (3135 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1565237

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13260 4 1355 bp AK356929 Available Available None





CDS Structure of MLOC_13260






Contig Sequence (3135 bp)

>contig_1565237 3135 assembly3_WGSMorex_rbca.fasta
TTAGGAACGGAGGGAGTATTAGATATAGTAATTGCAATTTGTATTCTTGTCTAAACTAAA
CTAGAATATTCCCAAGTTAATTATGGTGCTAATTTGAATTCACACACATAGTTACTAAAT
AAGTGTCACTGATTTAGTACAAAGTTGTACCAAATCAACGACACTTAGTTTCGGACGGAG
GGAGTAGAAATTAAATTAAGCATGCTTGAAAAATAACTCTGGTAGTAGAGAAAACTTACC
ACATATGTAACGATCCAAGGAACCATTTTGCATGAACTCATACACTAGGATTCTTTCTTT
CCCATGGATGCACCACCCAAGTAGCCTAATCAGATTAGTATGATGAAGCTTCGCAAGCTG
CAATTCACTGCTGACTGTTGCATGCTCAGCAGCTCTCTTGATGGCAACTGTAATTCCATC
GGACAACTGACACTGCAATGGTTACTGACGGAGATAAGATAACATTCTCTCAATAGAAGT
CAGTACTTTATTGGGGAGAAAAGGAAGACATGCATCACTTTGTTGGTTTATTTCTACATT
TACATATATTTTACCTTGTAAACCGTACCAAATCCACCGCGCCCAATTATTCCTTTTTCT
GAGAAATTGTTTGTAGCATCCACGATCTGAAAGAAGTTGAACTTTGCAAATCCCGTGCAA
GCCGCTTCTATATGGGCACAGAGCTCTGCAAGCTCTTCAATGTTGGACATTTTCTGTTCT
TGCAGGTCCACTTTTCCTGACTCATGGATAAGATATCCGTGTCAGTTGTCACCATTGGGG
TTGCAAAGAAACATAGGCATGGCTAAGAGAATACAAAATTATAGAGCGCATGCTCCAATT
TGGCTGCTGCAACGATCATCCACTCCCTTTAGGAAATTTGAAGCAAATAAGATTGTCATG
GAAACTTCATTCTATTAGTTTCCATGTCCGAGTCATATGCTTAAACGCACTAGGAAATTC
GTATAAGTAACTACTTACCTACAAATGGCTGTTCTTGAACATTGAGAAGTTCTGTAGCTC
CCTGGACACGTATTTTGGTAAACTCCAAAGCCCTTGTTGGAAACCTAAACATAGGTAAAT
CTCATTACTAATCTATACACCAGCCAGACAGCCACCAAATGTTTCAACGCAGTCCTAAAA
AGTGGCAAATTTCGTACATTCGAGTCTGTATATAACTGATAAATTAATGGGACATTTACG
CAATATGAGGTTCATGCCCATTAAATTTAGAAGGAAAAAAAAAATATGCTTATTGATTAA
GATACTACTCCCTCCGACTAACTTTCTACTAAAGCAGCGACAATTAATATGGATCGGAAG
GAGTAGAAATTTGTCGGAACTCACTGATTTGACGTATCCTACAGTACAGACATATAATCG
ACAGATACGTCGTATGTTCGCAACATGTAGCTCTGAACAGAACTGCTTGTATGATCTAAA
CCAAGCGGTAGTCCCTAGTCAGCCAAATATGATCAACAATCATCTGGTTTTCACTTGTTA
CTTAGCCAAGTGGTTCACCTTCCAAGTTGCTACTTGGTCAAAAGACGCCACAAGACTTCA
GATTTAAACGTCAATACATGATGAATAGTTCTCCGAGTAATAAAGTACATAATGAAAAAT
TATCCGACCTGACGTGATGATTTGAACTATCTGTGACTACACTGAGCACCCCCTCCTCGA
CCTGCTAGACAAGGATATACAAATATTATTGATGTGCAAATGACTATCACAGGTTGTATG
ATGGAGGTCATTGCAGAGCTGAAACCCCTGTGAAATCAGAATTGCTAAACTGAAATCGAA
TTGTTTAACTGGCAGTACCAATTTGCAGTTGGATTCAGACAAAGTCATGCACGGGATCAC
TTGAACAGACAAGTTCAGTCGAATTATATGAATAAAACTGCCCTAAAATTAGCGTTTTCC
CTCAATCACCAAATTATGATAGTATGCTAACCATGGCACGCCGACTGTTTGTCGAATTGT
CGACGAGGGCGATGAGCGGGATGAGGCGGACGAACATGTCGATCTCGTGCTGCGCGGCGC
GGAGCTCGTCGGCCATCCGTGCGCCCAGGAGCAGGCGGCGGAGGTAGCCGCAGTCCTGGC
ACGCCGTGGCGAGAGCATAGCACCGCCGAAGCGCGGTTCCGAGCTGCTCCAGCGGCCGCC
TGGTGGCCTCCCGCCGCATCAGCTCGGCGAGCTCCAGCTCCCTGAGAAGGACGCCGACGA
GCTCCACGTGCTGCGCGAGGCGCACGCAGGCGTCCCGGTGGCGGCGCGCCGCCAGCGCGG
CCTGCACCACCATGGAGACCAGCCCGAGCGCATCCACACCGACCAGCTGCGCCACGCTGG
AGGCCTGCCCCAGGGCGGCCCACAGGCTGCTCGAGGAGCTGTCCCACGGCGTCCCCATGC
TCGCTGCGACGTCTCCTGCCTCAGGCGACCGGGCTTTGTTGCCGCCATTGACGGGCAAGG
GCGCGACAGGTGTGTGTTGGTGAGCTTGTGTTTGACGGAGACTTTGACTAAGCGTGGTGT
AATAGAGTGCGAGTGACCTCTTTGAATCAGATTCAAAGCTGTAGGATAATCCAAACTTGG
GCTAGCTCATTGAGCCCGGTTAGGATTAGTAGTGTGATCAACGCTGCCGGATGATTAGTT
TAGGAAATCTAGGTTTAGTCGGTTTGTACTTTCCTAATACTAGTATGAGTCCGATTAGAA
TATGGAAAAAGCTAACCATCAGCCGGCGGATTATAATGGCCGCATCAGCCACCTTCCCCG
TAAGACACGCGTCCAAATGACTATGCGGTTCTGCAACAAAGACTATGTTTCTGAAACATA
TACGACGTTGCAGTAGTCTACTATAGATTAATGTTTTGACCATCCGGCCACTGCCAGCCG
CCCATGCCGCCCATGAACGTTGTAAAAAAATTCTGCAACTTGACCTTTGTTGTAAAAATT
ACTGAAACATGACCTTTGTTGCAAAAAATTCTCCGGCAAAAGTACCTATGTTGCAGAAAG
ACGAAGAAAAAAAAATTCTGCAACAAGCAAATTGTTTCTNNNNNNNNNNNNTTGTTTCAG
GAATTAACGGGTCCAAAGTTTATTTCTTACAACAAAGCGAAAGTTTCTACAACTCAGCCA
TCGTTTCAGGAATTA