| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_1565114
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_13208 |
1 |
288 bp |
AK359845 |
Not available |
Available |
None |
CDS Structure of MLOC_13208
Contig Sequence (4913 bp)
>contig_1565114 4913 assembly3_WGSMorex_rbca.fasta
GTTCGTATTTATTCTAGCAGTACTACTTGTTTGCATAGATGTATCCACTATATGCGTAGT
ATGTGCTAGNNTAGCTCAAGATCAGTATGTCATTAGTCTNNNNNNNGCCATGCTAGTTAT
TATTTTGTGGATTAATCTACTCGGAAAATTGCCTATTTACTCAACAGATATGTACTCCCT
CCATCTGAAATTACTTATCACAAAAATATATACAAATGAATGTATCTGGAATTAAAATAT
ATCTAGATACATCCATTCCTTTAACAAGTATTATCGGATGAACGGAGTATCATTTAGTAG
GCTTCTTTTGTTGTGCCCCCAGCTAGTACTATCTCATTTATTTTCATCTGAACCTTGTTG
TTTATTTGAACGTCCGGTTTCAGTTGTGGTTGTATCGTGGTTGACTTTATTTATGAAGCG
GGGCAAGATGCCTTTTTCTGTAGATACTTCTCGAGATCAATAGTTTATTAGGTCACACTC
GGACGTTAGTCCTCTACTTACTTCTTTTCTCTTATGTTATGAGCTTATTTGTTTCTTATA
TAGTACGTGTATGTCAATCAATAAAAGCAGCCGATAGTTGTATGCACTTTGTAACAATAC
ATTTGAAGTCATGAAACATGCTATGATGTCGCTTGGCATCACAGCTTGTGGGTAGAGCCG
CCACTGATACACCGAGATCGAAGATAAGCTTTTTAGCTGATAAATCAGTAGAGGGATTGA
ACTGGAGAAAGCTATTTGTTAATCGTGAGTTTATATTAAAGAAAACGAGATTAATTTCTG
CCGGGACAAAACACAGCATATCTGACGAGCACAATAGTTAGATCATCGAACTGAGCGGCA
ACATCATGTTTTGGAAGAAAATAAAGTAATGGACAGCTTAGAAATACCCAAAGATACATC
AACAAATAGGTTGCGATTGCATTCCCGGATAACTTTTCAGCGGATTATGAACCCAAATTT
TATTCTCGCACGCTCAACTACGGATTTGCAAAAAACTTATGAAGTATTATAGTATCTTTT
ACGTACCTGTGAGGCGTCCAGCTGATAGTCTTGGGGAAGCAGAGACGTGAGCTTGGAGCA
CAGATCTTCCACCTCCGTGCTCCCACTCGCCTTCCTCCCCGCATCGTTCCTGCCGAACGC
CATGTTCGTCGCCCCTCCGTCTCCTCCCCTTCTCTTCATGCTCGTGAAGCCAACTAGACT
TCCCTTCTTGAAAGACCCAGACCTCTCTTCTTATAGACCCATCGATTTGGCGTATGCACA
TGCATGAAACATGACAGTGGGGCTACCGACCACTTGTGCAACTAGCCAGGCCGCTAAGGT
TGCATGGACTATGTGATTTGGTGCTTGTGGCCACCTGTGCAATTGAATTTACACGGATAG
GGACGTAGAATGTTTGTCATGTATCTAAGTTTTACTTTTCACGGCCACTGTATAGTTGCC
TTCCCCATTTTCCATTGTCCAAGGTTTTTAGGCTGACAAGTTTTTTTTTTTTTTTTTTTG
AAAAGGAGGATGACACCTGTCTCTGCATCTGGACGATACATGCAGTTAATTTATTAATTA
TTCGTAAAGACCTTATAAAATAATACATCAGTATGCATGTCTGACATCTTTGCAACATTT
GTCGCTAATTCTAACCACTTGATGAAGGGGTGCCGAATGTTCGAGGCGAATACCAAGCAA
GACCTCGCAGGAACGGCTAACATCTAAAACCGAAGGTCCAACCAAGCTTCTTGTCGAGTC
TGGGGTACACACAGGTCTGGCGCACTCTGAGAAGCCGCCGCTGCCGTCTTCCACCGATCC
ATTTTTAGAGCAGGCACTCACGCATTGACCTTGCCAGGTCTTCCGTTGAAGCCACCACGG
TGCCAGACAACGTCACCTCCCTCCGCATGTCCATCATCATACAACCGTCGTCGATACCCT
CCTGCATCACATTGCCGAGACTCCACATCATCAATGTGTGACATGAGACGCCGATCCACC
ATTAAAACCGTCCACCGATCCCTCGACCCAATGCACACACCAAGGAGGAAACGACACAAG
AGCGCCGCCATCATTTGATCAAGGGTTATCCCCTGGAGGCAGGTGTAGGAGTTGGGAGCT
TCACCTCGATGACGCCTTTACGAAGGAAACAATGTAAAGGGCGTCACCATCACCGGTGGG
TTTTCACCCGGATCCATTGCAAGAACATCCCACTCACAACCTGTGCATCTGCAAGACCAC
CTTCAAAGCCCCAGAGTTGGCCGTCCAGATCCAGCGATCGTCCACAATCGCACTGCCACC
ATAGTGTATCCTGATGCTCCGGCCACTGCCGAAGGGCGCCACAACTAGAACATGGAGAGA
GGGCTGCCACCCCATCGCGCCATGTCGGAAGAGACATTAGGATGAATCCCAAGCACACTC
TTCACCGTCCCTGTACCGAACAGGATCTGGGGTCGAACGTCAGACCCGCCGGAGCAGCTC
CGTCTTGGACATGGGTACACCCATGCTATGCAGCCGAGGATGATCTGGGCCTCACTGTCC
GCCACCGCCCGGGGCCGCCACCAGGGCCGGCCCAAGGGAGGGACGAGCGGGGCGGCCGTC
CCGGGCCCCCCAAAAGTTAGGGGGGCCTCCCAGGTATATACTTAGGCATACAGGTCTTCA
GCGGCAACACTCGAGCGAATTTATTTTTGAAGCCAATCTCAGCGGCAGCGCTCCTGCTAA
GTCTAAGAAGTAAAACTGTAAAAGTAGATACAATGGGTGTGGCCATGTTTGCAAGCACTT
GGAGACTGTTGGGTAGGAAAGGAATCGTTCGATTCACTAATCATGATTTCCTACCCCTCA
AAAAAAAACAAATCATGATTTCCTCCTGTAACTTCAGACCGTTCGGTCTTTCCCTGCCCT
CTAGGCTCTTGCTAAATGAACGACTCAATGACTGCGGCGGCAAGTATGTCTCGTTGCACT
CTCTTCCCTAGCATATTCTTCTTCCTGTTTCTTTTCTTCTAATCCCGATTTCCAAATTCT
CAAACAGGTTTACAGGAAATTGTTGATAAGGCGTTGATGTGATGCAGATTTCTATTTTTT
GCGGATGATGTGGTATAGATCTCTTTGAGTGTGGTTCTGGTTTCCATCATGGCTGCTATA
TATTTTTCAGACGGATTCAACAATGATGGCACATACGGTCTAATTAACTCTTATTTTCTC
ATTCGCACAATTAGGTATGGTTGACTTCGTAATTTCAGTATTGTTAATTTGATTTATGTG
GATATGATGGGAATTAATATTTGAACATATGAATCAATTTTTTCACATGAGTCATATGAA
TTTACTTATCTATTCTAATTTGTCCGATACTCCTATTTGGGATAACAATCTTACAATTGT
CATTAGTTAGTGCAGAAACTAAACTATACTCAAATTTTTATGTTCGGACTATAGATAGAC
TTACCTTTGCTTATCTATCTAATCTTTTGGTATCTGAACCTACAGTTTACTCCAATACTT
ATAGTAAAGCTTGAAACTAAATATGGCATTTTGCATTTCTAAAGAGACCTTATGATAGCC
ACACACACAAATTTCTCTACTTTTTTCATACCCCATTGTTTTAGTGTTTAGGTTAAAGGC
CCCGTGTTTTAGTGTAGCCTGGCCCCCAAAAATCTTAGGACCGGCCCTGGCCGCCACTCT
GACATTTGTCGCGGCACGATGAGGCGACCATCCCGACCAGGCCATGACCGGAGGCCACCA
CCGCATGAACCCGGCTTGAATTGCCCGGTGCTCCACGGCGTCCTGACCATGCCGTCACCA
CCGTCCTACCATTAAACGGCCATGCCGCCGCCCACAGCAAGCCACGTCACTGCCAATATC
CAGATCGATCACGCCTCCTCGCGGGATGACATCCGCCCCACCTCCTTCATCATGAGTATG
GAGGGGATCCCCGCCACTGCTATCTGACATCGGGCTTAGCCTGATGGCACCCTCCGACAA
CAACGGAGGGAGAGGAGGGTGGAGGAAGGAGCGTGGCGGCTAGGATTTGGGGGCACTTGA
GTCGTACAACATTTCAATTCAGCCCAAACATAATTATTTTATGGTGAAATGAAGGCCCGA
TGCCAATTCATCGGTGAAATGGATCATGGCTCGAAGTGTCCTTGGCTCGGGGTTTGACGA
TATGCTTCCCTCCTCCCCTATACATGCATGTGACGGTGGCGCTATCTCGATCATTTCTGC
TTGCTCACAGGGTTTGGTGCTTCTCGGCCAGGAGCGAACCTTTCCGAGGATAGACCGGTG
GGGGTGTTGTGGCGAATTTCGATGGTTTCATTTAGTAGACATGAGATAATTTTTGGTTTG
TTGTTTTAGTCTATTCTAGTTATAGTTATGTCACTCTTGTGTTTTTGCTTGGCGACACGT
AGGCTAGCGGCTTCCAGCAGTGCATTCCTTGTTCATTGTTGGCAATATAATGTCCGCTTG
TGCAGTCTACTTTCTTTTATCAACCGTGTAAGAGAGGTACGTATCTCAACACCTTGTATT
TTCTTTTATCAACCGTGTAAGAGAGGTACGTATCTCAACACCTTGTATTGTTTGACAATT
GGGATGTTTCCACAAAGTGGCACCAAAGACTATTTTGTGATTATCTTATGCCTTCATAGT
TTTATGAGTATGGCGGACATGTGCCCGTCAATGGTATAACTTATGAGTGAATAGGGACGG
AGCTCCCATGTAGGCAATGCTTTTAATTGATACGAATGGTTTTAAAAATTTCTTAGTTAA
TTTTATATTAATCAATGTTTATTTTGTTTATGTTATGTGGACCAGCCCATCAAACGTGGT
CCCTTAATTAGAGTCATACTCACTAAAAGAAATATGTTCATACATGACGTTTTTCAAGAT
GTCGTTGATGAATTCGTCATNNNNNTATGACGATTTCATCCGAGATTGTCGTA
