| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_1565052
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_13180 |
1 |
471 bp |
MLOC_13180.1 |
Available |
Available |
LOC_Os08g38300.1, FRAME:+1, EVALUE:4e-29, 13108.m04061 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
CDS Structure of MLOC_13180
Contig Sequence (4737 bp)
>contig_1565052 4737 assembly3_WGSMorex_rbca.fasta
ATCTTCGAGAAGCTCGCCGGGGAGTCCGCCAAGCTGGCGAGGTACAACAAGAAGCCCACC
ATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCTGGCGAGCTCGCCAAG
CACGCNGTGTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCATCCTAGGCCTGGTCG
TTGTCGTGTCTTGAATTGATTTGATGGTGGCGTTCTGTACGTAGGTAGCAGTACGATGTT
ACAACCTCTGTAAGGATTGTGCTGCTTGTTGTTCTGAAGAAATAGTGATGTCGCCGTTTG
AATCGATCTTCATGTCCGCCTGCGTGTTGCGTCAGGCTCGTCTTGCTTTCAACATTTTTT
TCTGGGTTTTCTTTACTGTGATAGTTTGTAAGTCTGCAGATAGAAACCTCTAAATTTATT
TTTACACTCTGATACTTTGAAAACCCCGCAGTTAAATTCATGAATTTTGCCACTGTGTAC
GTGTTGTTACTGTTTCTCTTTTGTCGCCATGAAAGTTTTCGTTTTAAAACTGAAGTTGGC
GAGTTTTGTTAATCTCTGACGGAACATTCCAAGTTTTTTCCTCAGTTCACCTTGTCGTCC
ATACGGCAAGAAGCCAAGAAACAAGCTTGCCAGCCCGTGCATAGAAAGCCAGAATGCGTT
AGATTTTGATATAACTTCTTGAGGTAAATTAGAGGCTTTTCACAAAAAGAAGAAGAGATA
TATTAGAGGCAGTGCACCCATGTTTTCAGAGTCAAGGAACAGGCCAGATGCAGTCATCAT
TTTATTACGATGGCACACGGAAAGTTTGCTGTTGCTGCTAATATATTGAGTATGGAGACA
CCTGAATTTTTTCTCTATATATGTTTATACATCTTTAGGAATTTCATCAACACCAACTTG
GGCCGAGAAACCGATTAAAAGTGATTAGAATGAAATTATTTTATGATGGCTCAATAAAGT
CTCATATTTTTTTTGTGTGCCGATAAGTAAAGCCTCATACCATGATTATATGTAAAAATT
TTATTTACACATTCATAGACCCAAGACATAATTAATTACAACAAGAAGACCCATGAGTAA
AAGTATTTCTAAAAATCGTAACAAACAAAGGTTGCTACATGGGAAAATAAAATGGATCTA
ACAGGCAAAGAATGGTCTTGGGAATCGTTTGTATTAATACACATACAGTTTGGTGTTCCT
GGTGACTTTGTCACCAAGATCTTGCAAGAGTTTGCTGTTTTGGACCTTTTTGGTTCAGGA
TCATGAGACCCGAACTACAAACATAATCTCTTTTCTCGACAATAGATCGATAACCCGTGG
CCAGTTTACTGACTTGGCAAATTGGCAATCCATGAAAAAGGCAGCCTGAAACATGTCCTT
GCGCATCATTTGCTTAGCTAGGTAAATTCCGCAAGGTATCCAAGAGCTTCCACCTATTAT
TTCTTCTATCCAGGCAAGTCTCCTCTTAAGTTTCAGCACACTAGCATGAACAACCCTAAT
ATCAACTTCGGCAAGCTTGGAAAATGAGCGTATCAACATGTAATAATCAGCGTGTCCAAC
ACAAACAAGACTACCAGTTATTGTTTTCTTTCTATAGTGAAGATAGCCATCTGAGCTCGG
ACACTTGCTTGACGTTGGCGGCATATAACAAAATCCTTGGTCTTCCGTTTCTGACTCGAT
ACTTAGTATCCCCGATGATGATGCAGAAAAGCACCTTGCGCCGACAAAAGTTCCATCCCA
ACCTCATTTATTCACTCCAGTTGTGCTTCACATTTCCTCCATGTGCGGTGTGCGCTTTTG
GATTCTCATTCTACAATGCAACAGATTTAGCCATCAAGTCCACAACATTCACCCCGAAAA
GAGATGTAGCAAATCCTCAAGGTGCTACATTTGTACAAATTTTAAGGTCAGATATGCTAC
GAATAAAATATTTTTTTTATGATCAACATTTGCTTTTCTATTTATATTCCAATTTTATAT
TTTAGCTGTTTCTAAAAAAAATCTTGTTGTGTTTGGTTTGTATAATCATTTGCAGGTATT
TTCATGCTGATTTTGTTTCTGAAATAATGTTCACAGATAAAAGGTTGTTACCCAAGGTTC
AGAAGGGCTGCATGTAGAGATTAGAAGTTCAATAATAGTTAGTATGTGATTAAATAAAAT
AGAAAACCTTTTCTGAATAGCAACTTTATTGTTCTTGATCTTTAAAATTTATAATATGTC
ATTTTCTCAAAATAAAGCAAAATATCATTCAAACCAATGTGTTTGGTTCCTAAAATCATT
TATGTTTTTCTGTGTGATGATTTTGGTCCTGAAATAATATCCATACATAGAACCTTGTTA
ACGATTTGCACTAAAGGTACAGATCAAAAGGCACTAGGCACTAGGCACTAGGCGGGCGTT
TTGTGACCGCCTAGCATGTGGCCTGTCTAAGCAGGGCCCGAGTAACAACAGTTCCTCTGG
TCCTTTGTAAATTACCGCTTGATGCAAAAAGTAAGGAATAAGAGTTGACAACAACATCAA
GTTGGGTGCATTACCTCTCGTCCTTTGTATAGATCTGAAAGATCCCTATCAAGTGATCCT
CTTCAACTGAACATGCAATCCTAGGAAAAACAACATCTTTGCAGTATTTGAGATATGAGT
GAAGGTCCTTCGAATAGTCTACAAAATTATAAAACTTCGTCAATTTTGTACCACTACTAA
GAATTTGGTCTAGCAAAAGTCCACTCTATAATGCATCCAGTTAGACTCAAACGATTATAA
TCTGGGCAAACGTATCATTGTGAACATCTTTATTAAATAGGTGTCATTTTTCTTATCCAA
TATACTTTGACATTATTGTACTTCTAAGCTTTCCTCAAGACATAATATAATAAAATACAC
ATTGGTTTAAATACAAATCTAGTGACAATGCTAAAGGGGAGTTACTGAGCACCATCCGTA
CAAAAGAGAGAAATGCAACTTTGTCTTGGTTGAATGTTTGAAACATGGGATCCCTTGAAA
CATAATGAGATGTTAAAGAATACTCTTTGTGAGAACTTTATGTGTAAGAAAGCATGAGAA
TATGTTTATTGGATAATCCAAAGGTACTAGCAGAAACCAGTATATTTCAGTGGAAGATGC
CGGTGCATTGTTTGTTAATTTCTGTAATGCTGCCTTGTGCAAATGTGCCATTAATATAGG
TATGGAGGTTGAAGACCTAGGACATGCGAAAAGTTATTTATTACTCCCTCCGTTCCTANN
NNNNAGTCTTTTAAGAGATTTCATTAGACGTCTACATACGAAACAAAATGAGTGAATATA
CACACTAAATTATGTCTATATACATCCGTATGTAGTCCACTAGTGGAATCTCTAGAAAGA
NNTATATTTAGGAAAGGAGGGAGTACAAACAAGGCCAGAAACTCCATGCATACATCGACA
CATGATTCCCCGCATTACAAAGATATAAATGTTATTCTAGCATTTCTTGCCATTTTACTA
CTAAATAAATGCCTTAAAATTCAAAAATCTATAACGATGGTTCATACATATCCTATCTCA
CTAATGGAAAATTACCATTGCAAGATAGACTAGTGGCTCTACACATAGGAGGGTATAACC
TATTAACACACAAAATATGACATGGCTACCATGGTAGATAGTACTTCCTCCGTTCCTAAA
TATAAGTCTTTATAGAGATTTCACTATGAACTACGTACGGATGTATATAGACATACTTTA
GAGTGCAAATTCATTCATTTTCTGTGTATATAGTTCATAGTGGAATCTCCAAAAGAACAT
ATATTTAGGAACACAAGGAGTACCATTACATGTTATTCTCTGTTATGACATATCTACTTT
GTTAAAAGCTAGAATAGTATGTATTTGGTACCATAAGACGTAAGTATACATACCACTAAT
GGATAACACATAAGGCTGAGACCTGACATGGTTACATTACAAGAAAAAACTTGATGTAGA
TGGTAAACAATGGTCATTAACAATTCCCATGTGCAACGTCACTTTTACCATAGGCATCTG
CAAGAGTGCAGAGCAATCCTCATGTGCCAAACTCCCCACCTGCATTTCTTGCTGCCTGCA
AATCTCCTGAAGAAAAAAATAAGTTCTGTCCATCATATGTATGACAGATCTTACATGACT
TAAGAGAGTGACCCTATAAGGAATACTCACCTCCCATACCCCTTGACCATTGACGGTATA
CTGAAGTCTTAGAGCCAATATTAGTATAGCCATCACACAGACCCATGTAGGGACCCTGAC
TGGATCACTAGACAAGCATAGTTTTGGAGGCATTGCCCACTCATAGATGCGGCAAGCATG
AGGGAGGATTCTTTCTACCGACAGAGCCAACTCATTCAAGTAGCATTGAGAAATAGCATA
TAAATTGACTGAAGGAAGCTGCAAGCCTATTCTTCGTGCTATGGATCCAGCCGCAACTTC
TAGTTGCCACGCTCCAATCACTTGGACTGACCTGAAGAGTTGCCTTGCACTCATTCATAA
GGGCTTCCAAGAAGCTTGCCAACTTCGGTAAATACTGCCACACAAGGAAGCTTACCCTCC
ATTGACCACCTATAAATGTCAGCCGGTAGGATGGTGTGATAGCCTGGCTTATTAGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTCCTTCTTTTTTGGGAGCCCATTCGAACAGAACT
TCCAGGTTAAGCATGCTTGGCTTGGAGTAGTTCCAGGATGGGTGACCGACCGGGAAG
