Map Locations of contig_1564909 (4178 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1564909

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13136 1 247 bp MLOC_13136.1 Available Available None





CDS Structure of MLOC_13136






Contig Sequence (4178 bp)

>contig_1564909 4178 assembly3_WGSMorex_rbca.fasta
GGCCGGGGGAGGGGGAGGGGGAGGGGCTCGGCGAGAATGGCCCGCCTGGGTGGTGCGCCT
CCGCTTCCGTGGTGGTCTTGGCAGCTACTCTTCAGCGGGGAGGAAAGAGAGCATGTGTTC
CTCGCCTCCTCTGGCTCGGAGGCGTCAATGGCGTCCCGGGTGGGTACTCCTGCTCCTTCC
TGGGTCGCGTCCCCGTTTTGCCCAAACTTTTCTTTCTTGAGCCCAAAGGAAAGCCGCGTC
GTCCTTGTTGGGCTCCGTCGCTGAAGCCCGTTTGCTTTCGCTATTTCTCGTGGCAGATGT
GCGGCGTTGTCGTTGCCACGTTGTGCTCGTTTTCCTCTCGCGTGGCTATCAGATTGGAAT
CTAAACGGAAAATTAATAGACCCTGGTGATGAGTTTTTTTGCAGTACTTTTCTTTACAAT
GTTCTTACAAAATATACTGTATTTTTTAGAACATCCAAATTGCATATACGCAGGCTCAGC
ATAGCATAGATGTACTTTCTAGTGTTTTCTACATAGTAAATAGCACAAAACTACTACAAT
TTAAGCTATCGTTTCAAAGAACTATCAACTTTTTCCCACTGGTAACTACCAAGTCGGGGT
CGTCTGTTTCAAAAAACTCAAAACTCGCGCGACTAACGTTTTAAGCCATTTTTTAGCAAA
TGGGCCCACCGGTCAGGCCACGTGCCCCACGACGCTCACGGCGCGCCCGTTAACGGTTGT
TACATCGATCGGTATGGTCGGAACCAAAGACGCTGGTCGGGCCGCCCTCTGTCTCACTCA
ACCCCTCCATTCCTCACCCCCGCTCCCACTCTGTGACCTAGGTGAAATGGTGGCGGCGCA
GCCAAATGTCGACGGCGACGAGCCTCTGGGCCAAGGCGGCACCGACGATGAGGGAGGTGG
GCATGAAGAGGTTGACAAATAGTTGGGCAGCTCGAGTTTCCCAACGCAACGGTCACTGCA
GACGTCACCATCGGAGCTCCGGTGGGATTCAGCATTCTGTGCGGCTAGGGCAATGGCAAA
GTGCATTCACTAGGATCCGGCGAGCAACCACAGGTAGGCGTCGTCGTTTGGTGGAGTGAG
GTAAACATTTTGAGCAGCATTCATATTTTCAGTTCTATTTTTGAAATTAGGGTTAGAAGA
CATTGCAGTATGCAAATGAGCAATGTAACCGGCTTTAGAAATTATTGCATTATGCAAATG
AGCAATGTAATTGTTTGTTGGGCAGTGGTGAAGTGCATGTTTTAGGTTATGCCACTGTAT
TTAGTTAGTGCAGTATTGCAAATGAGTTTCGGTGCTTTATAATAAATCTCCTTCTTTTTT
TCAATTTAATCTCATACATCTTAGATGCTGAGATTTGGGACATGAGGCTGCATTTTCAAG
GAACGGATAATATGGAGAGAAAGTATTCAGTTTCTCCAGATATCAGTTATCTGACCATAT
GGGCATTGGTTGAGTTGGAGGGTTCTGGAATGGATGTTTTTCTGACGTATGTAAAGGAAG
AGGGAAAGGGCTTGGAGGGGGTGGAGGTCCTGGATAGTGAGGAGAAAGCAGAGGAAATGC
TTGACCTATTTGTTGATAAGAAGCTCCTCAATGTCTCTGTCAGAAAAGCTACTGATCCTA
GTCGAGCAGATGTTAATATGGATCACATCTTCCTTGAGGAACAAATTTCTGTTAATAATG
TTGGTGAGCCAGTTGTTTACAAGGTTTCCCAAGAAGGTGTACTCTATCCAGCCTCTGATT
CAACTTTGCCAGTAGTAAACCCTGATGAGCCATATCTTAACACACAACAAAGCTGCAATT
TCAACAAGGGAAAAATGTTCTGGAGGAAGAAGAACAAGATGTAGAAGTAGAAGATGAAGA
TGATGATGAGATGGACAAATCCTCTTCAGATTTTGAGTTTTTCAGGGGTGATCACAGAGC
GGAAAATATATCATACAAGGCTTAGGCTAGGGGTGAAGATGAGGCTCGCACAGGGACAAG
CCAGAAGCAGAGGGAAGAGGAACATACTGGAGAGCACTATTGTGGAGATAACTCAGAACC
CTCTAAGTTTTGGGAGGAAGATCAAATCCTTCATGAGAAATAAGGAGAGGAACCTTCAGT
TGTATTACAGAAAGGAGCAAAGAAGGTTAAGGTAGTCAAAAAAACAGGCCCAACTAGCAA
GTCACATAGCGAGCGTGAACACATCAAGCTTGCAGATTATGTGCGTGAACCTGACGAATA
CTTCTTTCCACGTGATTTAGGCCTTACTGATGAAGAAGAGGCTCCAAGGTTGCCTTCTCG
AAGGAAGAGTAGGGTGAAGAAGAAGAAAGAGAGGAGATGGTATGATCCATCATTATCTGA
TGCACATGACCAGTTTTCAAATGCATTTATGCTTCCAAAATGTTGTGGAGTTCATGGAAC
CACTTAGGAGGAAAGATTTATTTGAGGTGCTAGCTAAGAAGGACACATCAAGAAATAGAA
CAGTGACTTGTGGCAACTGCAACAAGCAATGGCACATGTTTAGTAACTGTGGTGCCCCCT
TGAAGCTTGGGTTTGCAAATGAGGAAGAACTAGCACCAGGTTATATAACTCACTTGTTAT
TTCTTTTTAACTGCCCAGAAATTGTTTCAATCATTTCATTACTTACAATTTTCATTATTG
TGTAGGAATATAGAGAAAATTACTCTGAAGTCGGTTCTTCCATGGCTACAAATGTACAAA
GGCCTCCAAGAGTACCTTCTGCTTCTGCACCAGAACCAGGACCATCTATAGCAACAACTT
CTGCACCTCCACCAGGTATAGTTGCCCCTTCTAGGTCAAGGAAAAGGAACAACTCTTCTA
CTCTAGCAGCAGAACCAGCCAAGAGGAGCAGGACCAACACTACTACTCCAGAAGCAGGAC
CAGCTAAGAGAAGCGGGAACAATACTTCTAATACAGCAGTATGACCACCTGATGATCTGA
GTTGAGCTCATTCTCTTGTCGTTAGGGAAACAAGCTCATATTCACAATTGTTGCAAGACT
CCAACACCTTCTCCGCAAGGCGCCTCTTGAACTCTGCCTCCTGCTCATCAGCGACTTGTT
GTGCCCTCTCCATGCGCCTCCTCCTCCTCATTTGCTCTGATGCACTGGGTCTCACCTCCA
TGGCCTCCCACTCCTCCTCTGCGACATCTCCTAGGTCTGGATCCATCTAGGTTTCGTGGC
GGTTGGTGGAACAAATGGGAAAGAGAGGGGGAGGGGGTTTTATTTACAGTGGTGGGTTTG
GGCGGGCCTAGGGTTGCAATAAATCTGGCCCATAAAGCCCAATTAAGCACAACAGAGCTT
CCGGTTTGCTTCAAAAAGCAATTTGCAATTTTTCATGACCATGCCGAGTATTGGAAGCGA
CAAGTCGCCTCGCAAATCATGACAACATACATCATCTTGCATGACATGATCATCGAGAAT
GATAGAGGACAGCTCGAGAACTCTCGCTACATCTTCAATGGGTATCTTGTTGAGCCAGAC
CTTAATGTAAATGTGCTCCAGAAAGTATTTTTTTTAACATAGTATAAACGCAAACGTTCA
TATAAACACGCATATATTCATTTTCTATGAACGCATACACGCACACCCTAGTCTTATGAA
CACCTTCGAAAGACTAAGCTCGCGTCATCTTGAGATTTACGAAGTTATCATAGGCGCCTT
GTCGTCGGCGGAAACGTCTTCTTCCACTGAATGCGCATCACCGAAAATCCTTAAATAAAT
TCAAAAATAATGCAAACATCAAGACTTAAACGCTGATAGATTAAAAATACCATTGTCCCT
CCAACCATCCAACCACAAAAGCATCCGAACTCAAAACAAAATCGGTAACAAGAGAAAGTG
ACGAGCACTAGCTCGGTACATACGAAGTAAAATTCACCTCAAGCACTCCTTCACATTCGT
CGTAAAAAAGGTACACTAGGTAGACGGACGCAGCTCATCATGGTCAGGATGATAATAAGA
TAAGTAAGAGATAATGACGAGCTACGCTCATCATCACTTCCCCCCCCCCCCACGCCCCCC
CCCCACCCCCCCCCCACCCCCCACCTCCCACCCTCCCCCCCCCTCCCCACCCACTCCCCC
CCCTCTCCTCCTCACCCCCCCTCCCCCTCCTCCCTCACACTCCCTCCTTTTACTTCTTAT
CTCATTATTTATCCCTCCCTCCCCCCCCCTCCCCCCCC