Contig Data
morexGenes
Links



Map Locations of contig_1564834 (3206 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1564834

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13112 4 1032 bp MLOC_13112.2 Available Available LOC_Os01g74170.1, FRAME:+2, EVALUE:3e-70, 13101.m08104 protein expressed protein





CDS Structure of MLOC_13112






Contig Sequence (3206 bp)

>contig_1564834 3206 assembly3_WGSMorex_rbca.fasta
AGGCAGCTCTGGCAGAGGCTCTCTCCAGTAAGCAACTCTGCACCCGTGGAATGTACTCTG
AGTGCTTCTTTTTGCTATCAGTGGTTCTGTCCATGAACCATGTGGCCAGTGTTTGATTTC
ACGCTGGTCATCTGTCCTTTGTCCTCTCCCGCATTTCATCCAAACACTGAAATCTTGTCA
ACTATCTCCTCTGCAGCCCAACTGAAGAAAGAATCAGAATGTGAGCTAACCAGGGAATCC
ATCTCGAACGCCACTGCAACCAACGAGCAGCTCAGGAGCCTGGTCGTGGAACAGAGGGCT
AGGAGAGATGAGTTTGCAAAAGTCATAGCACATCAGCGTGAAGGTAAAAAAAATCACAAT
CTAAATCATGCTTCTGGTACAATAGTTTAGAGTATTCACAGTATTATCCGACCCGTAAGG
TCTAAACCCAACAGGGAATTATAAGTGCGCGAGCCTGGTTTAAAGATACGAGTCCAAAAT
AGTCCAGTCTGAGGGGTTCTTTTCAACTCCTAGCTCCAATATATTCTGCCCTGTTATGCC
GACGCCAACATTATGTTTTTGCTTGAATATTTTTATTTTATTTGGCTATGCTGAATCTGG
AATCTACATGCCTTGATTTATATTTATTTTTGATGGCAGCTATCGAAGCTCTTGAAGCTA
ATGTTGACGTGGTGGGAAAAAAGAACCTGGACGAAGCTATCATGTGGTACAATAAATTTC
TTGGTTTTCGAGTTATTGCAGGGGAAGGTAATCACTGTTTCCATAACGTGTTCCTTTAAG
TAAGCTTCAGGCCATAACACGTGGCATTTCTTCTCTTCTGTGTGTGAAGGGGTTACATTT
GTCTTCAATAAAGTTGACAAGCAAAGACCTGATGATGAGTATTCGTTTTGCATAAAAGTA
AATAACGACGAGTACAGCTGTGAGTTACAATTTTCTGACCTGAGCTGTCTAATATTCATA
CTGTTTGAAATGTATAGTCATCAAAGTTCTCATTTTCTTTATAACAGTAATTCAGTGTAC
TCCATTAATAAAAGACACTGAAGAATTGGTGAAGGATTTGAACCGCACTAACGATCTCTC
CAAGTTCGTTAAAATCATGAGAGCAAGATTCCAAGCGGCTGCAATCAAAGGTATTCCATG
TTTCTGTACAGAACTGTATCGAGTCCATTTTCCCTGAAACGCCAGTTAATTGAGTTTTGC
AGTGTTTCCCCCAAGGTTAGCTCTGTTATTTGTCTTAATTGGCTGAGTGTCGAGATGAAC
CATCTGATGTAGCAAAACATTACGATGCCTTGGGTGCTTTCTCATAATGAGTAATACTGA
ACATGGTTCACGGTAGCTCTGTTGAAAAATGGGCTGTGTAGCTTATGAGCTATGCAACTC
TTTGTTCCGCACTACCACGTGGAGTTGTAAATGTGCTGCATATTCCTTTCTTATACCATT
TATAGAGAGTTCTGCTTGTACTGTCGGCAGGGGTTCATCCTGCAACTTCATTGTGCTCAG
ACACATCATCCACAACAATGTCATCACCACCGGTCACATCAGTTGATACCACAAGTGAAG
GCACCACCAATCAAAGCCATTCCCGAAGCCGTTTCAAGAATCAAGATATGTGTGCAGAGA
GAGGGGCCCCTCCCCGATCAATCGCATCTCCCCTTATGTCGGGATCTAGCACGCGTCGCT
CCCCACGCCTTGCGGTAAGTACACTATGTCACCTGTAGGCACACTGCTAGCTGTTTGTTA
TTATCGTTTACACTCTGTTGAGAACAGCAAAATAGCAATCGTGCTGATGTATGGAGATGG
GTTTTTTCATTCACAGGCTGCTGCTACAGGGAGTATACATTAAGCAATAGACGAAAATCC
ACTTGGGTGGCACCATGTGATGCGGTTTGGTTGTGTCACAGTTTAGACGGCCCTCATCGA
GCAAATTCTGAGTTAGACAAACTGAACATGAACGAAAATAAGCAGTGGGCAGTGTACTTG
GTAGACAAAGAGAGTTCCATCTCGAACTCGTCATCCATCTGTAGCTTCTGTTCCCCTCAA
CCTGACCTCAGTGCTTCATATTAATCTGTACTGTAGAGTGAAGCATCTAGCGTTGCAGTT
GTAGGCAGCTTGGATTTGGTCCTTGCCATGCCATTGTGGGTGATGTATAATACTCCTATA
TTGTAATTTTATCAAGTGTTAGCAGTAGCCCATGGCATCTTATATATAGCAAAAGGGACT
TACCAAGGCCAGTAATAGTACAACCAAAAAACCCAAAAAAGCCCTGATCCATGCAAAATA
ATTGGTTGGATGGTTATAGACATGAATAACAAGGCTATTTTTTTTTAAATAATGCATTTT
CTTTATTAAAATCGACAAATAATAGAGTGAGGCGTTTTGGCTCCTGGGCTCATCTGCATC
CATGCTGAATATTTTCTTAAACAAATGCTAGAAAAATTCAAAAAAATCCAACTTTCCTTT
TATCATAGTAGAGAATTTGATGCGTGATGTTGACTCCAAATTTTAAATTATTTGGATATC
CGAGTAGCTCTCGGTAAAAAAAACAAATTTAGGGCCTTTTGAAAAGTACTGTTCATATAC
TGTTCGGGTCCTTATTTGTCTTCTTTGCTGAGAGCTACTCAGATATCCAAATGGTCTAAA
ATTTGGAGGGCACATTGCCCGTCCAATTAGCTACCTTCACGTATAAGTTGGATTTTTTAA
TGAATTTTTTCTAACCGGGTGCAGATGAGCGCGGGCTTAAAATTGAATATTCACAAATAA
TATGTAGTTTGAGCAGTTTGAATTATTAGGACCTGATCGGCCACATCGTAGCCGACTGGA
CCTCACGGCCGTAGCGAAGCCGACACATGCATGGCCCCGCCATGGTTGCATTGCATCTGT
TAGCACTCTTTGCTAGCTCTCGGCCAGGGCACTGACGCTTCCGACCACTCTGCTAGCTGG
CTGATCCTGTGCGCTTTGTTAGTCGGTAGCTTAGGCTATAAAATAAACCCTCTGTTTCTA
AATATAAATCTTTTTAAAAGTTTTATTAACGACTACATACGGATGTATATAGGCACATCA
TTTAGAGTATAGATTCATTCATTTTGCTTCGTATGTAATCTCCTAGAAAATCTCTAAAAA
GACTTATATTTAGGAACTACTCCCTCCGTTCCTAAANNNAAGTCTTTTAAGCAATTTCAC
TAAGAGACTACATACGAAACAAAATG