| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_1564802
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_13102 |
1 |
1698 bp |
MLOC_13102.1 |
Available |
Available |
LOC_Os06g30370.1, FRAME:+3, EVALUE:3e-92, 13106.m03134 protein osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
CDS Structure of MLOC_13102
Contig Sequence (6906 bp)
>contig_1564802 6906 assembly3_WGSMorex_rbca.fasta
TTTCAGCCCGCGCTTTCCCGCACCAAAGCATATTCCGCGACTATGCTCTTTTATGGGTCC
GTTATGCGGGGTCTGCATCCGCGTCCGTGCGCGCCGGCCCGCATAGACGTTTTTACGCGA
ACTGCGAACACGTTTTGCGGACCGGACGAATGCGGGGTCTGCTAGAGTTGCTCTAAGAAC
CTTCAAACACTACGTTGTGAAGGAATCAAGAGTTTGTAAAGTCTCACGGACCGCCTTCAT
GAAAATCTACTCATAGTGAGGCTTGATAGTAGAAGGTTGCCTAACTTTTAATTTCTTGTT
TTCGTTCTATCTTTTATGCCATATTTATTTGGTAACTACAATTTAACCGATGTTCTAGAC
GAAGGTAATTCATCTTTGTAAACTGTAGCGTCAAAATCAGAAAGAAATAAAAGAGTAGTG
TGGCTCGAGAGAAAAACCCTTGTGCTCACAAAACTAGGGGTCATATACTATACACACAAT
ATTTCACACCCACATAATCGAAGCTATGGATGACCAACACGTAAATAGAACAAAATCTTC
TACGACACGTCAATTTTCGCTTTGGTCACCAACACGTAGACCCCTTAGTTGTACATTGTA
ACGCCAAGCAAATACTTTATGCTCACGAAACTAGGTACTATATACCGACGCACACAGTAT
TTTACACCTAAAAGAATGAGAACAGAGAGGAAACTTCCCCCTGTCTTATTCTTATAGGAG
ATGAAAAGACTTGAATCCGGGCCGGCAACAACAACCTTTGTGCTGTCCATCACTTCATCC
AGAAGAGCTTCTCACATATCGATAACCAACACGCAAATAGACCAAAATCGCATACGATAC
ATCAATCTTAACTTTAGTCACTGACATGTGGACCCATCGGTTCTAACTTTGGTCACTCAC
ATATGGTCATAGAACTGGGGCCTTCACAATAGCAACGAGATGTCCATGTCATGTTTCCAC
CACCTCCCTCCACCTATAAATACTCTCTCACCCCCTCACCCTTTCTCGTCCATACAAACA
CTGCTCATACAACACAGACAAGCAGGCGCTCCCCAGCTAGCTAGCTGGCTAGTTTTGCTG
TTGCTGCTCGACCTCACCGCCATCCTCCGGCCATGGCAGCCCATGTGGATCCCCTTGTGG
TTGGGAGGGTGATCGGTGACGTTGTGGACATGTTCGTGCCTAGCATGCCGGTGATCGTGC
GCTTCGGGACCAAGGACCTGACGAACGGCTGCGAGATCAAGCCGTCCATCGCCGTCGCGG
CGCCCTCGATCCAGATGGCCGGCCGGGCCAGCGATCTCTTCACCTTGGTGAGACTGCCAT
ATGCATGTGTGTCTGCATGCATGGTGCTTTATGCGTGGTTAATTACTTGCATATGCGCTC
TGATTCAGTTGTTGACTGATCCGGACGTGTGCTAAAATTTTCAGGTTATGACTGATCCGG
ATGCACCGAGCCCCAGCGAGCCAACCATGAAGGAGTGGCTTCACTGGTAATTAACTGATT
TACTACTTACTACTCTTACCAGTTGTTAATTGTGCTTTCTAAGCATCTACATTTACAATC
TTGTACTAATGCGTGTATGAGCTAGCTGATTAATCCTGACGTTTTTCTTCTGGCAATGTT
CTGTCGTAACAGGCTGGTGGTTAACATACCTGGTGGAGCAGATCCTTCTCAAGGTAAGAT
TTGCCCAGTACTTCCTTTTCTAGCTGATGCCCAATGCCCAGTATTTTCTGATCCCACAAC
AAGCTTTAACTAAAGAGAAATATATCCATCCAAAACGATCAGCTTCGCAGCGGTACGTGC
CAGCCGGCGCACGATACCTGTCCTGCGGCGGCGCGCAACACGTGTCCACGCGGCGGGACC
CATGCGGTGGACACGTAGCGGGCGTCTCGTCCCGTATCCCTCTGTGCCGCCCACGGCGCG
TGTCGACCTGAGCGGCGCAGCCCCGTCACCCTGGCCACACACGACAGATCATGCATGGCA
TCGGTCGCTTTTGCCGGAGCAAACCGCCGGCCGATCGGCCGGTTTTACTCCGCCTTTTGC
TTGCTAAACTGCAAAAAAGTTTTTTTTTAAAAAGAGCCTCCTCGTGACTAAAGGAACGCC
GTGCTTACGTTATTTCTAGCTGCACGCCTGCACTAGTACGTGGTGTGAGTGTGACCAACA
CACACATACTGATGCCTGAAGATATCTATTTGTTTGCTAATGGCGAGCTATAGATGCTAA
TGATGTACAGTAGTAATTGATGATGATCCATGGCTCTGCGTGCAGGTGAGGAGGTGGTGC
CCTACATGGGTCCGCGGCCGCCGTTGGGCATCCACCGCTACGTGCTGGTGCTGTTCCAGC
AGAAGGCGCGCGTGTTGGCGCCGGCTCCCGGCGGGGACACGGCGGCGGCGTCGGCTATGC
GCGCGCGGTTCAGCACCCGTGCCTTCGCAGAGCGCCATGACTTGGGGCTCCCCGTCGGCG
CCATGTACTTCAACGCGCAAAAGGAGCCGGCAAACCGCCGCCGCCGCTACTAGCTCGTCG
CCCGCCGGCCGACCAAACCCGCTGCTGGTCCGTCCGTGCGTGCGTGCGCGCCGACCCAAT
AAATTAACCATCGACCTTGTCGTTTGTCATGAACAAATCTCGGCTTGTATTGTGTGGTAC
TCTTTGTTGGTTTGTTTTTTGCGGGTGCGTGTGGTACTCTTTGGACCATATATATTTACC
GCTTTCTCTCTTCGTTGTGTTTTATTGGTTATGGGTGAAATCCATGGCAGCGGCCGCGCA
GTGTGAAGTACCTGTGGCTGCATTTCTTTTGGCAGGTATAAGTGTCCGCTTTTTTTTTTT
AGATCAGTATAACTGTGCTAACTGCTCATCAGCGCATGATGTGATAGAAGGCGGATCCTA
ACTAAACTCGCACCCCCGCCCCCGGGATTCGCCAGCCCGTTTAGGCCTTGTTCGGTTAAT
CCCCATCATAAGGGAATTAAAGGGTATTGGAAGGGTTTGAGGTGGATTTTGACTTGCTAG
GGATTTAATCCCTTCCAATCCCTTCAAACCCCTTGAAATCCTATGAAACCGAACAAGGCC
TTAGTCTGTTTATATATGGTTTTTCATGTTGGTCTTTCTTTTTTTTCGTTCTTTTCCTTT
TTCAAATACCAAAATTATTTATTTATTCTAAAAATAAATATAAACATGAAAAATTGGATT
CATTATTGTTTTGAAAATCGCAAACATATTTAATATTTGCGAACATTTCCTTAGATGGAG
AACATTCCTTGAAATTCATGAACACTTTTTTCAAACTTATAAATATGTTTAGAAATTTGT
CAAGATTTTTAAAAACAAAAAAAATTGAATTTATGCACATTTTTTTGAATTACCGAATAG
TTTTTGAATTCCCTAATAATTTTTTGAAAGTCATGAAAGTGTTCAAAATGGCAAAAAAAA
TACATAAGTGGATATGTTCTGAATAATATGAACATTTTTTAAACGCGTGATCAATTTTTA
TTTGTGCATGATTTTTGAATTTGCGAACGTTTTTAAAAATTCATGAATGTTCGTTCAAAT
ATGTTAATATTTTTTTAAATCGCCTTTTATTTTGGAGTTACGAACATTTTGGTTTTTGAA
AAGGAAAATGAAAATCCCAAATTTGCAAATTTGCAAAATTTTCAACATTTTTTAAAATTT
AGAGTTTTTTGAAAGGTTGAGTGTTTTTTAAAAGTAAAAAAGGAAAAACAATCTAAAAAA
ATGTAATGTAAAAAACAGGTTTGCCTGGTCCCGCAATGGGTCAGTCCAATGTATGCGGGT
GGGGTGTGTTTGCTCGTTTCCCTCGCATAGGCCAAGGAATAGGAGCACTCCTGACAGACG
TTCATGTCGTTGTCGCAAAGTACATGAATACCAAATGAAAGTGACAAATATTTTTTGAAA
TTCATGAACATTTATCATATCAAGCTTGAAAAAGTGTACAGGTACACTGCATTAATGATG
TAACACTACATGAACATACTTAACACTAGGTGTGGATATTATTTTTTCTATTGAAAATGA
AGTTTTATTGTATCATTACACTGTGCCATTACAAGAGTATCAATGAAAGTAAGCCTTGAT
GTGGCCAACAAGTCATGCTATTTCAGTGCAACCAAAGTTAGCAAGGGAGTGAGCAACCCT
ATTCTGAGAATGAGCTTTTTTTATAGGAACAATATCTTGATGCTCGATGAGTTTCTTGAT
GCTCGATGAGTTTCTTGATTTCATCAACTACTTATGGAGATGGACATCATCATGGACAGG
CTGCACAGTGATGAATATCACCACCAGGACAACCATGCATGGAGATGGAGATCACCATCG
GTAGACAACATGCATGGAGATGGAGATCATCATGTGCTACCAAAAGGGGCTATACCATGT
CACACTTGTATAAAATACATGTGAAAGTTTATCCCCGTTATACACCTTTCTTTTACATGG
AAGATGTCTTAAATAAGGTAATCCCTCAAAGAATGTCAAGTGAAATAACATATCAAGTAT
ATTTAGTGGTGGGCCTATAAAATTAGGCTGACACTAGATCTCCTTGAAGTGATGGGTTTG
TGTCAGACACTTACATGTCGAGCATTGGTTAAATTGGCATGGCTATCAAAATAGTTTTGG
TCCACAAAGCATAGGATTTGGTGTGACATGAGATGGGCCTAACAAACAAGAGTCATATAG
AGATATGATAAGCAAGTGTTGCGTACTAAGTGATCTAGTCTTCTAGTAGTGCTGCAAAAT
CTCACTAGTTGACATGTTGATCTTGCATCTTGAATTGCTAAGTATTAATGGATATATGTT
GATTTCGGTGGGAGTAATATTCCTATTAAAATGCTTAATACGAATTACTCGTCATGAATA
CATGTCTTGGTGTTTTTCCATATTTATGTTCTAGATCGATGGCAAGACCTGCTTTTTAGA
TGTCTTGCAGATCTCTGGTGCAACGTCTCTAGGTCTAAGACCATTAACCCAAGATGATTC
CCAGAACTTGGCCTTTTTGCCATCACCAATAGTCACAACCATGGACGCCGAGAAGAGATC
TCTGTCTCTATCGCTACAGGGCATTTCCATCCCCGCCCAAGTTTTAGGATGGTCCACCCA
TTCAAACCATAGCCAGCGAAGGCGTAGGGCGATCACAAATTTCTCGAGGTTAAGCACACC
CAGGCCACCGAAAATCTTGGGCTTGCACACCATTTCCAGTTGACCTTACACTTTCCACCT
CACACCTTGTCACAACCAGCCCAGAGGTAGGCATGCCGCAAGCTATCAATCCTTTTCCAA
AGTTCAGCAGGGAGCTCTAGAGGGGTGAGGTGATAGATCACAATGGTCGTGAGGACTACC
TCATGGGAAAAGTGTACCGGGCCACTGGGAATGCCTGAAGGATGTCGTCAAGGTTAACGT
TGGCACAACGGATGGGCGCGACCAAGCTCTTGCTACAGTTGGTGACTAATCCAGTGACAT
CACCAAAGGACGCCCACATTTAAGCGAGGAATTGGATGTCATCTTTGATAGGAGCAACAA
AATGGTCGCGCCATCAGTACATAAGGAGGCCCGGATAGGATTGTCATGGAGAGAATGCAT
ATTACCTTGCGCGGTAGCCTTGGCAAGAATTCAATGTAGGGGGTCAATAGCAAGGACGAA
GAGCAAGGGGGAGAGAGGGACCCCTGGCGCAGCCTACAATCGTGCTTGATAGGGTCGCCC
GCAATACCATTCAAAAGGACTATAGAGGATATCGTGGAAAGGAGGGCTAATATCCAATCA
CAGAACCGGCTCGGAAAATGGCGCAGTAAATCCATGAGGTAATCCCATCTAACCGAGTCA
AAGGCTTTCTTGATGTCTAACTTTAGCAGGAGAGTTGGGGACTTCGTACGGTGGAAGCGG
CATGCCAAGTTGCGAACATACATAAAGTTGTCGTGAATACTTCTTTTCTTGATAAAAGCA
CTTTGCATGTGGGAGACAAGCACGAGCATGTGAGGGGACAACCTAGTGGCTATCATCTTG
GCAATGATCTTAGCAATCGCGTGGATGAGACTGATAAGCCCAAAGTCGGTGATGTCCTCC
GCACCATATTTTTTTCAGATAAGAGCGATGTTAGCTGAGTTGAGCTAGTGAAGGTTTCTG
ATATGAAGATTTGAAAAATTGTTGATCGCCTGCCTGATCTCCAGCTTTATGATGTCCCAG
CATTCTTTGAAGAAAACTCCGGTGAATCCGTCCGGGCGTGGCACTTTATCTCTAGGTAGC
TCGTTAATCGCAGCACGAACCTGCACCTCAGTGAAAGCAGTTCCAAGCTCCGAGAGGTCG
CGGGTAGCTGACGGGATGCAGTCCCAGTTGAAGTCCTTGGAGCGCAGGGGGGCTTCCCAA
TAGCTTTTCCAAAATGGGCCTAGATAATATCTTTCTTGTGATCATGACTTGTGACCCAAC
CAGTATTGTGTTTAAGATGGTGGATGAAATTCTTTCTTCGTCTCTGGTTGATACGAAGGT
GAAAGAAATGTATATTTGCATCCGCTTCTTTGAGAAATTTGATTCTCGATCTTTGTCTTT
TCCTCGCCCGCTCAAGGACCGCCAAGGCCACCACCTTCCTCTTAAGGTCCTTTCTTTTAT
TTCGCTTGCCCATCGACAGGACCCTATTTTCCTGCGCAATGCCGGGGCAGAGGATGATCT
CAAGAGCCATGTGAACTTGGATTTTATGGTTAGAGAAAATGGACTTGCTCCATTTGCGAA
GGCACTAAATTGTTCTTTTACGCTTATGGAAAAGGACCTGGTATGGCTCTGAGTGGATCA
TTGTAGGATCTAAAGTATGTCTAGAGAGGGGGTGATTNNNCTACTTGACAAGATAAAAAA
AATTGCCTTTTCTCAATTTTACTTGAGAGGTAGCTATGAAAATTATAACAAGTCAAGTAC
ACCCTA
