Contig Data
morexGenes
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Map Locations of contig_1564762 (7121 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1564762

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13086 1 634 bp MLOC_13086.1 Available Available LOC_Os09g39540.2, FRAME:-1, EVALUE:3e-38, 13109.m03966 protein 40S ribosomal protein S25, putative, expressed
MLOC_13085 3 1449 bp MLOC_13085.1 Available Available None
MLOC_13084 1 286 bp AK355851 Not available Available None





CDS Structure of MLOC_13086






CDS Structure of MLOC_13085






CDS Structure of MLOC_13084






Contig Sequence (7121 bp)

>contig_1564762 7121 assembly3_WGSMorex_rbca.fasta
TACGGAGGCACCTCGGTGAGCAGCTTGTCGTAGGTGGCCTGGTCGAAGAGCACCGCGTTG
TTCACCTTCTCCTTTTGCTTTCCCTTGCTCCACTTCTTCTTCTTCTGCTTCCCGCCGCCG
GACTTGGCCGGCTTGGACGACGCCGCCGGGGCCTTCTCCTTCTTCGGCGCCTGCGAGGAC
GAGCAAGAGAGGGTGCGTCAGTGGTCAGCACGCGCCGGCGCTGCGGCTGCGGGGGGACGG
ACGCGGCGCACGTACCATGGCTGACGGAGGCGGTGCGGCGGCGGGAGCGGCGAGGTAGAG
GCGGCGGGGGCGGCGGCGGGCAGGAGTCGAATGGGGAAGGAGAGATGGATTCGGAGGAGG
AGCAGCTATATGAGTTGGAGGCTAGGGTTTCCCTGTGGGCCGCGGCGGGCTATATGAGTT
GGCCCATATGAGTTGGGCCGCGCGTGGCATGTAGTTCCTTCTCCAGAAATTATTATCCAT
CTAAGCCCATTTGACTTCCCTCGAAAAACAAATCTAATCCCATTTGAAGCTTCACAACTC
GCTGGAAAAAAAATTGAAGCTTCACAATTATTATGTACTACTCCCACAGTCCCGAAATAA
ATAAGTGACTACTTTGTGCTAACTTTATTGAGTCGTTTAATTTGAAAAGGAGAGACTATT
TTCTACCCATTTTTATAGGGGAAATGTTGTAGATCCACAACGGATCTTTTCCTTTCGTAC
ACCGTGTTCCATGCGTGACGCGTGTCCCGGTGGAGCCCACCACACATCTATCCTTATCTC
TGCGCATCGTCATGTTGCTTCTCCGAGTCATCTTCCTCAATAAGGCTCGTATTACACCAG
CATTCGGTATGTAAAAGATATTCTGCAACATTATTCATGTTCCAACAGTCCTTGCACAAT
ACTATATATGCTATAGAAAGATTAAGACGGCAAACAACTCCAACACAACCATGTTCGCTT
GTACGCCACGTGTCCTGCATGCCATGTGTCCATGATTTTTCATGATTCCCCTCAAAAATT
TCTGCAACAACATCAATGTTGCAGAAATTTCTTCCGGTAACACAAGCTATGTTAAAAAAA
ATAAAGACAATTTATTTTGCAACATATCTCCCTTGTGAAAAACAAATCTACAAAAAGATC
TTAGTTGCAAAACAAACTGCAGCACACACCGTGTTCCAGAAAGATAACTAGTGGTCGAGA
AGTTTTGCAACAAGCATCTTGTTGCGGGACTTGTTCTGCAACATAACTCTTGTTGCAAAA
GGGAGGTGGTGCTCGTGGGTGGGGTAGATCAAATGACCATCCCCGCGTCCATCAAATGGC
CAACGAGACGGCGATTGTTTTCTCGTTATGCTCCAGCCGATGCGTAGCATGGCCCTATAA
TCGGTATAGAAATGGGGCCTTAAAGTATTCATAGTTGTATAGAAAATGTTCAAACAAGTT
TAAAATATGTTCATGTATTTTCATAAGCAGGAATCAAAGGGTATTTCCCCGGTAGTCTGG
CGGTCACAAGTGTGCTCTGTTTTGTTCACATCAGCCAGACAAAGGTAATCCTCTGCATTT
TGTAAAACATATGTTTTACATTGTTATATTTTGTATCACACTCTATCATTAGTTTGGATT
CTTACGAAGGTAATCTTCCTCATTTTATAACATAGGTATTTTTGCTCCTTATATTTAGTA
TCACATTTTTCAGTACAACAACTCATTTCTGTTGCGAAGTTTGCTCCATTTTAAGTAACC
GTCAAGTTCTTTCGTGCAGCCCAGCTGTTGCCGCGTGTTTTCTTTGCTCTTTGTCCATCT
GAGGAATGTGTGTCTCCGGGCTGTTGAGGCGTCGGCGTCCGGACCTGCATCATGGATTGA
AATTTCTATGCGGCAACGGATCAGCATGATTCCATTTAAAAGAAACTACAAATTGGCGTA
GTTGCAGTGAAGGAATTGTAGTCTATATACACAGAACAAAAGCAGAGTTTGCAGAAGCCA
TTGTCTGATTAATGACAATGTCGGGCACTCATCTTCTCCTGGTCACTGAAGCAGATTGCA
GCTCGGTGGCAAATGGGAGATTGAGAGATGCAACAATTTTGGAGCGATTGCAAAGGGGTT
TGGCACTAACAAACAAGGAAGCACAAAGCCTCGTAACATGAACACCCTACTTCATCCTTA
CTTATATATACTAATACTAATAATAAAGCAGCTACTGCTTGTGTCGTCCGTCATGGCGTT
TTTGCAGAAAAAACCTTCTATTTTATGGTAATCAACCCGCAGTCCTTGCTGAGGGGAGAA
AAAACGGTTCGATCTTTTTCTCGCCTGGATGCAGATCGAGCGGACGCGCTTTTGATCCGA
TCAGGACATGACGCAGGTCGACGGCGGCAGGGCTCTCCGAGACGGCAACGATAGGGAAGC
GGTGGACATCGGCGCGAGGCGAATGAGGTAGGGATCAAGCTCGGCGGCGTGTAGTGGAGG
CCGGTGGCGGCGGTGCTCCATGGCCATGACGGTTCGGTCTCCTAGGAAGAAGAGAGGAGG
TGAGATTGAGAGAAGAGAAGGGAGAATAGGGACAGCGCGACTACCTGCTGCTGGTGCGAC
GACGGCTCCGGATGCACGTTTTTGTCTGGATTCTTATTCTAGCACAAATAAAGCTTCTCC
TTCCTCCTCCAATCTAGCCGGCCAAAGAACAGATCCCTAGCGCGGCTCCTCCTCATCCGT
CCTTTTCCTCATGTCTAATCCATCATCTTCCTCCTATCTAATTTCTTGTCTTCAGCACGA
AATCACATGGGCGTGCGGCAGCAATCGCCCTTGCCACAGTCGAGGAAGAGGAACGAAGCC
GTGAATATGGCTGGAACGCGGACAGACTTCGTGGTCTGAGGTGGAGCACGACCTGTCGTA
GGTAGGAAGGAGCTGGGGGTGGGGTACCTCGTGGGCTGTATGACCAGGAAAATGAGCGGC
CGCTGGCTGATGGATAAGGTCCCGAGAGAAGGAAGATGGAGGCGGAGCAATGGAGATGTG
TGAAGATGAGGCATGCACTTGTCACAAGGACTTCTGTCAACATATGTGTGCTTGGAAAGA
TAGCTTGTGCGGTCGGAAGAAAATCGACAACTCACCAATCAATCTCCTATGTACACAGCC
AAAAAACTATGTGAGGTAATTAGGTGCTGGCGAAATTACCCTGTAAGCTCTGTAGTTTAG
AAAAATAACTTATTTCTTCCATTAGGTGGGCAATACAATGGAGAAATGGAAGAGAAATGT
ATGATGGTTAATTCACTCTATCTTTTTCCTAATCACCATATCTCTTATTTTGTTTAGTAA
TATCATATTTCAACTATGTAATGACATGTTTGTTTAGAAAGTTCTCATGCTAAATTTATC
ATTTATGTAAATACTACTTCCTCTGTCTCAAAAAGCTTGTGTGCTTAATTCCATGTCGTT
TCTCGGCCTACCATAACAAGTGCGGAGAGCAAATGTTGTACCAGATTTTCTCAGCCTAAT
TCGATGTTTTCTTAACAAGTGCGGCCTACACATATCTCAGTAGATGGTATAGTGTAGAAC
TGTGGGGTGTTTTTAAGTGCTGTTGTACCACGCCCAAATTTAAATACATGGAGCACACAA
TTAAAAATTGAGGGAGTAATTAAAATGAAAATATATGGAGCATAAATTTAACGTGCTTCA
TCAATCAAGCTGGCCATTTTTTCTCTTCAAGGAGCATCTATGAAAACTATAGGAGTGTAA
AGAATTTTTATTCAGTTGTAACACATGTGCGTGTTACAAACTGAGACAAGCAAGGAGGGA
AATAGGTGTAGACATAAGAGATGTAACAATGTCTCCTGTTGCAACGCTCGGCATTTGTGC
TAGTGAGTATTAATGAAGTATACCTTTATCATCCAAACCAAATTGGTCTCATGGCATCAC
TTTCATCGACACAAGACAACAAAATACTAGCGCCCTGAAACAACCGTAAAGCATGGACAG
CAACAAATAATAGCACACAATATATAAGGTAGATTTCATTGCGCTGACAAAACGATCATA
AAGTGTACCAAAACTCAAAAGCAATTCAACATTACTGGTGGCACAAGTGCCTCCCTGGAC
ATAGTGAACTTGAATATAACAGCAACACCTCAGTCTACTGGACTAGAGAACACAGCCATA
GAACACATGATAATGATAAATCAGGTGTTTGTGGCCCTGGTGAAGATCTGCTGGCTGGAG
TGGATAGACACCATCCTAATGAGCCCCCTCTCCATCAGGTCCTTGATAGCCCTGCGAGCC
AGAGAGCCATTGATCTGCAGGTAGTAGGTAGACACAGGGTGAGTAATAAGATCACCAGGT
TCATTGTGCATGGTTGAAAATGCCAAAAAGAGTACAATTTATTAAATTAAGAGCAGCCAC
AAATTTGATGCGCAGACAAATGCAAGCAAGGTTTTCGATTCAGGTTGTTCAGGGGTAGCA
ACTCTTGACCAGTCGAGCCAAGACTAGTCTCGACTAGTCAAGGTGTTTCAGTCAACATGC
AGTTACGACTCATCGACTAGTCATCCGACTGGAGAACAGGGCATGCAATGGTAAATAGCC
AGCACGAGTAGCAGTGCTCATGTCCATCAGTGGTTCTAATGTACAGTTCGAGGGATGCCA
GGCACAAATTGTGGACAGCAAGATGCAGGGACAAGTTAATTAAGCGCTCAGCGGAATCAA
TGGTGATCTTGTTAAAAACATCATTGGCACTGTGCATGTCCAAATCAGATTATGCAATAT
CTAAGACACTAACACATAAATTTTTCAACAGTTGGGCACATCAAATTAACTACATCCTAG
TTATAACTTGGCACACCAAGCAAAATCTGAGGCTGCCACCCTTATGCACCGAACAGAACA
TCACACTGCAAAAAAACCATCAACACAGATGCAGCAGCAGGAGACACAATCAATTCATAA
CACAATCATATATGCACATGCTATATCTTAGAGCCCAGGTACGTGTTCATGCTCATGGTC
AGACTACCACAGTAAAACACTTTACACATACAGTATATCCTACCATCCCGATATCTCAAT
TCTCACGGTAAGGAAGCAAGCAAGAAGCACAGATCCGGAGGAGGGAGGAGGATGGACGGC
GGTGGCGTTACCCTGAGTCGCTCGGAGAGGACGGATGGCGTGATCTGCTTGTACTTGGGC
ACCTCGGTGAGCAGCTTGTCGTAAGTGGCCTGGTCGAAGAGCACCGCGTTGTTCACCTTC
TCCTTTTGTTTTCCCTTGCTCCACTTCTTCTTCTTCTGCTTCCCTCCGCCCGACTTTGCC
GGCTTCGACGAAGCCGCAGGGGCCTTCTCCTTCTTCGGCGCCTGCGGGGACACGAGAGAG
CGATGGGAGAGGGGGCGTCAGCGCGAGCCCGGTGTAGTGACGAGGGGAGACGGATGCGGG
GGGTGGGATGGAGCACGTACCATGGCTGACGGCGGTGGCGCGGCGGCGAGGAAGACGAGG
TGGAGGAGGCGGCGGCGGGGAGGAGGAGAAGAGATGGGTTGCGGGGTGGAGGAGGGGGTA
TATGAGTCGGACGGAGGCTAGGGTTTCTCTGCGGGCCGGGGTGGGCTGTTGGGCCGCGCG
CAGTGGGCTCGTTCTAGGGGGTTATTTGTGACAATCTTTGACCAACATCTTCTTGTAGGG
AAAAAAACTACTGCCCGGCATTATTTATAAACTAATGAAGCCCTTACAAATAACCATACA
TCACAGCAAACACACGTAACAAATAGAAAAGAGAGCCTGTGGCAGTTAGGTCCGTCCCTA
GGGTGACGGTTGGTTTCCTGGCTCGCGAGTCCTAAGGCGATCTAAGGTTCCCTCGCCGCC
GCCGTCCCGCCGCTGCGCTGTCGATCTTGTTCCTGCCTTGGGAATCTGCGTAGGGGGTGT
GATTGTCCTCCCTCGTCCCTCTCCTCGAACCCATCCACCTCTCAGCCTTTCATGGGTCTA
GGGGTCCCTGGCAATTCACTGGTTTAGCCAGTAACCAAACAAGGCCTTACGGACCTCGAC
ATTCCAGATTCCTACATAAGAGTGCTTAGATCTCCCACTGAAATACAGGGCAAGGGTGTA
GCGTATGGGGGTTATTCCCCCCACCCCAGGCGAACAAACTGTATTTTCCAACAATTTGTT
ATATCAATAAGCAATAAGCATGATGTGGTACTTGTGGAGTTTATCCGTCCAAGTCCATTT
ATAACCCTAAAGAAAGGACAACGACACCCATTTGCGGGAGCGAGCACACTTCCAAAATAG
TAAGGAGTAGGTCTGCGCGGCTAGGACACCCGAAAAAAAGAAGGCTACCACACGCCCCAC
GTCTGTGATCCCTGCACCCCGCGATCACCTGGTTTTAATTTTTGGGATTTTCCTTCTTTT
CTTATTTTTCCAATTTTAAATACGTGAAAGTTTTTTGAAATCCAAAATAATATTTGTTTG
AATTTTATTTTTAAGTTTTGGAATATTTTTGTATTTTGTGAACATTTCAGGACAATGTTT
GGGATTTCCCTTCTTTTCTTATTTTTAAGTTTTGTGAATATTTCTAAGTTTGGGATGCAG
GACACCCATGAAGTTTTTAATGAGCATTTTTAAAATTTATTTTTTGAATTAATGAACATT
TTCGAACATGGAAACACTTTTATAAATTCGTGAACATTTTTAACATGGGAACATTCTAGA
TTTTTTTTTTAAATACAATAAATTTTTTAAATGTATGAACGGTTTAAATTTCGGAAGTCT
TTGAAATTCATGGACATTTGAACAAACTTAGAAAGCATTTGAGTAAGAAACCAATCGAAA
CAAAAACAAACGGCGTTTTAAGTTTTAACCCAGAACGAAGCATCATACTGTAGTACTAAA
CCAACCCGTCCCTGATTAATCCTGAATTAATCCAGGTGGGAAATGAAACAACATGAATCA
ATAGAGTTGGCACAAAATGCTATCATGTGGAGATGCCCGGAATGGCTGCATACGACATGA
GCGAACGCAATCCCATCATCAAAGATGAATTATTCCCTCCGACTCCGAGGCTAAAACCAC
TGTACTGTTGAGAAAACAAGACAATTTTCCGAGTATATTAATCTACAAAATAATAACTAG
CATGGCATTGNNNAGACTAATGACATACTGATCTTGAGCTA