morexGenes - Barley RNA-seq Database

Contig contig_1564737
Source Contig contig_1564737
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1564737 (7240 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_1564737

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_13076	1	3821 bp	MLOC_13076.1	Available	Available	LOC_Os03g21730.1, FRAME:-1, EVALUE:0.0, 13103.m02611 protein receptor-like protein kinase precursor, putative, expressed
CDS Structure of MLOC_13076

Contig Sequence (7240 bp)

>contig_1564737 7240 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGTGCTGCTTCTCCCCGCCCAGTCACTGATGGGTGAGACCAGGGC
GTACACGAGCGGAAGGAGACGACGGGAGCGTTCATTTTTATCCATTGCAGACCCACTTGT
GACTCATATTTGGGTTCAGTTTGGGTCAAAAACGGACATTAGGCGGACACGTTGTTCATT
TGGGTCGCCCCGTTTGGCAAAGTTTTATATCCAAATAACTCAAACGTATTTTAGTACGGA
GGGAGTAAAATGGAGGCAAGCAGCAACTGACGTATGCTTGGGAGGCAGCCAGCGACTTGA
CGACAGACAGCCGGCCAAGCAGTGCAGAGCTTGCATTGCCTAGATGAAGGATAGATAGAT
CGGCTCTTCATTTGATGGATGGTCAAAATTCAAAAAGGTGCATCATACTAAAACTAAGAG
CCCGATTATATATACTAAAACTTTCTTATGGTTGGCTGATGGGAACAGGCTTAGTTTACT
CAAGACAGGCCGCTCTCATGCTTTGGGTATAGGAGTATATAGAGAGATTAAAAGAAGAAA
GATACTCCTGCAGCTGTAACAGCACGAGGGAAGACATGAGGAAGGGGACACATAAGCAAC
TTTCATAATGCACTAGAGTCTAGAGTTACAGTTAGCCTCTAGGGTGTAGTCAATCAGTAT
CAACCTCTCATGGTCTGTCTGTCTGTGTGTGTAATTCCAAACAGAGTCAGGTTAGATGAC
GAGACAAAACATCAGGCCTTCTCACAGATCGCTTGCTATGTAGAATAATCGGTATGTAGT
ACTGTAGAATAATCGGTATGTAGTACTGTACTATAATCGGTATGTAGTACTCCCTTCATA
AACTAATATAAGAACATTTAGAATACCATTTTAATAATCTAAATATTTTTATATTAGTTT
ATAGAAGGAGTACTTGTGGACTGGTTCAGGTACAGACAGTACATCTCATGTTAAAAGGGG
AGATAAGAGGGACCAATGTTAAAATTTGTCAAAATTTAAACCAAGGCATTTCTGAACCAG
ATGACACATACTGGGCACTGAAATTGCCGGAACACATGAAATGAAAGCATCGTTGTTTCT
CTCTTTGACAGAGAAACAAGGGAGCTTCTCAAGCAATACAAGGCTTAACTGAAATGCAAA
AGCATTCCAGGTGAAACACTACAAATAGACCCCCGTAAAAAAAAACTGCAAATACACAGG
AATTTTATAGGAGCTCAGGTGCATATAAGTTTCAAATTACAGCTAGACCTATCAAGAGAT
GACAGGATTAGATCAACTGGACCCGCCATACATGGTTAAAGGAGACACCAGAGGATAACA
CAAGAAGTATCATTCCATCATCACACTACATAACTGAAACTAACAACTACACACAACCTG
TAGACAAGACATCAGGCAAATATGAATACTTCTGAAAATATAAGTCTCATGCTTATAAAA
CTGATGTGAGAGGATCCACAACAGACATCATACTGATGAGGATCAAAGTCAAACACATCA
ACAGCCATAGGACATGAAACCCTTGCAATGCATTAGATGATTTCCTGCCTATCAAACACT
ACGTTGGCACTTGCCACCCTGCTCCTACTACCTAAAGCATACTAGATAGATTAAATGGTT
ACCAAGCAAAGAAGGATACCCAAAATGAAACAAGGCCCGACGAGAAGGGGGCCAAAGCAG
ACAGAGCTTAACCTAATTCGGCTTCTGGGCAGTCCTGTGGGCATCTGATCAACTCCAATA
TGTTCACCACCTCACTCATGTCTGGCCTATTGGAGGGAACCTGAGATGTACACACTAAGC
CAAGTTTCATGATAGGAACCGCCTCTTCCAGTGGGAATTTTCCGCAGAGCTTCTCATCCA
CGCACTCTTCCACTTTGCCTTCATCCAGAGCAGCCCTCACCACATCACACAGCACAATAA
CATCATCTTCCATGTACTCCACTGGTGTCCTCCCTGTCATGACCTCCAGTACAAGAACTC
CAAATCCATACACATCACATTTCTCGGTTATCTTCACAGTCCTGCATGTAAATTCTGGTG
CCATGTAACCAAGTGCACTCTGTACCTTGCTGCTTAGAACATACCGATCCAACATTGGCA
GTAGCTTCGCCAATCCATAGTCCCCCACCTTGGCCTCGCCCGAATCATCAAGCATAATGT
TGCTTGACTTCAGGTTGTAGTGGATAATGTCATGCCAGTGGAGGTGAGCCAGGCTTCTTG
CCATGCCAAGAACTATGTCAAATCTTTCTTTCCATGAAAGGTAATTTGCATTGGACGATT
CATGAAGCTGTTTATGCAAGTTACCCCCAGAGACAAACTCATAGATAAGAAGCTGAAGTG
ATGGTGTCCAATAATAGCCCTTGAGTGCAACAAGGTTACGGTGGCGTAGCTTGCCCAGCA
TCTTCACTTCCCTCTCAAATTCATCTTGAGATTTAACCAAGCTTGACACAGTCAGTTTCT
TGATGGCAACAGGTTGGCCATCTCGGAGAGTGGTCTTGTAGACAGTGCCAAAACCACCAC
GGCCGAGCTCGCAGTCCTTGTTCAGAAGAGCATGAGTACTGGCACTGAATTCTGGATTGC
CTCCTCCAAACATTACAAGCTTGCCTGCATTCACGTCAGTTGTTGGAGACTGACTGAGAT
ATCCATCTGAGAGTTCCAGCGCAGCAGCAGCACCACCAGAATGAGAACCTGGGGCGCGAA
CTTGAAGGTTAAGAACAGTAATGGTTATGATACCAACAGCAATGAGAACAGCGGCACCGA
TTGCAACAAGGGCAGAGATGCTCAGTATGGTTTTCTTGTGATGGAGGCCCCCAGGCACGG
GCTCTTTCTGTGCCAGCGGATTGGAAGAAGAGTCTGGATTCAGTACAATTGGTTTTGGTA
GTACACCAGGGCAAGAAGAGTTGAGCTTTGCACCGCACAGGCCAGGATTGTCAGACACAG
ATGAGAGTGAGATAGTGTCAAAAAAGCTACCAGGAGGGAGATCCCCGGAGAGCTGGTTAT
GTGAAATGTTGAAGCGAATGAGGTGCGCAAGGTTGGAGAGCTGTTTCGGCAGACCACCCG
TGAGCTTGTTGCGAGAAAGATCAGCACTCTCAAGGTTGGTGAGATTAGCTATTGCTGCTG
GAATAGCTCCTGTTAGACCGTTGTGTGATAGATCCCTGCACATAGTGACCAAGTATATAC
AAATACAATTAAAGGCTGAATTACATGAACAACTCCAAATATCAACCTGGCGAACCGAGT
CGAATAAGAGAAAGAGGTGCTTAAACTTACAGTGACGCCAGGGCAGAGCAATCGCCAATC
TGGGATGGGATTTCTCCAGTGAGGGAGTTCTTGGCAAGGCTAAGCAATTTGAACGACTTG
CCTCCAATGGTAGATGGAATGCTCCCATTGAGCCTATTGGCACTCAAATCAAGCAGCTCC
AGTGACTTCATCTCCACAATGCTGGCTGGAACACTCCCGGACAGTGAGTTCCAAGACATG
TTCAGCGACTGCAAGGTGAGCAGTTGCGAGAGTTGTGACGGGATCCGTCCTGAAAACGAA
TTGCTTGACAGGTCCAGGCCTTGAATCACAGAGGATGCATTCACAGGCACCATTACCTCA
CCACTGAATGTGTTGTAGGACACCGATACCCATTGCACACCGGAAGCAAATACCCATGTA
GGCAGGCTGCCAGTGAGGGAATTCCAGCTCACGTCAACGTGCACTAGGCTTGTACATCCA
CCGATTGACTCAGGCAAGCCACCAGTGAACCCATTTCCAGACAGCCTCAACTCCCTCAGC
GACATGAGGCCACCAATTGACCCCGGAATCTCCCCGGAGAATTTGTTCCCCGACAAATCT
AGTGTCTCCATGCTCACCATTTCTCCGACCCAAGTTGGAACGTTCCCGGTGAGCTCATTT
GAGCTCAAGTCAAGGTCTGTGCAAGTGGAGAGCCTCCGCAGGGACTCTGGCAAGTTGCCG
GAGAGCGAGTTGGAGCTCAGGTCCACTGACCGCAGCAGCGGACAGTCCCCGATGTCATCC
GGGAGGCTGCCTGTGAGGCGGTTCCGCCGCAGGTTCAGAGCCCGCAGGTTGAACATCTTG
CTGATGCCCACGGGCAACTCGCCGGTGATGGCATTGCCGGAGAGGTCCAGAGTTCGCAGC
GCATTCAGGGACCAGATGCCGCTGGGCAGCATGCCGGCTAGGCGGTTGGAAGACAGGTTC
AGAGACGCGAGCGTGCCGCACGCGCCCACGTCCGGGGTGTCACCGGTGAAGGCGTTGTTG
GCCAGGGAGACGTCCCGGAGGGCGTGGCACTTGCCGAAGAATCCCTCCGGGATGGGGGCC
GAGAAGGCGTTGCAGCTGAGGTCGAGCGACTGGAGGTCCGGGAGGCGAGCGAGGTCGGGT
GGGATGTCGCCGGAGAAGTTGTTGGCGGAGAGGGAGAGCGACTGGAGCGACTCGAGGCGC
AGGAGGCCGCGTCCGAGCTTGCCGGAGAGGCCGAAGCCGGCGAGGTTGAGCCCCGAGACG
CGGCCGGTGCGCGGGTCGCAGGTGATGCCGGCCCACGCGCAGGCCCGCTCGTCGTCCTCG
CTCCACGTCGCGAGGCGCCCCTCCGGGTCCACCACGTCGGCCTTGAACACAATCAGCCCC
AGGACGTCGTCGTTCAGCGCCGCCGCCAGGCCCGCGCGGCCGCCGCCCTTGGCCTCCGCC
AAGAAGACGAGGTGGACGAGGAGCAGCAGCACGAGGGACCGCATTGCTGCGAGTTGGATC
CCAAATGGCAAGGCCCAAACAGCACAGCACGGCACGGGCAGCAACAAGTGAGGAGGGCTT
TTATGGGGCTGGGAACAAGGAGGAGACGCCCCCAAAATGCCGCAAGAAGGCGATTCTGAG
GAAGCGGATGAGCTAGGAGAGATGGGATTTAGTCAAATCTGCAGCAGAGGACCTCCAGGC
TTGGGACGCCGCCCTCCTCTACAAATTAAGCAGGAGAAGAAACCAAATGTAAGCCATTAA
GCTGCAGAAATTCGGACTCTAAGGAGTAGCGGCGATAGGTAAGGACGTACCGGCACGGGA
ACCTCCGCCGACTACTTGTAGGGCGCAGCCACCTCACCGGAGAACGCCATTGTTGCAGGT
CGGAAAGGGAGAGAGGAGCGAGGGGAAGGGGGCGTGGGGTGTCAAGTGAACCGCGGTGGT
ATATGTTGGTGACAAAGGGGAAAAAAATGGGCGAGGGGGAAAAGCTGCTGCACCGCAGGA
GTGATCGGACGGCCATGAGCCGCTGTAGCACGCCATCGAGAGTTTGGGTGGCCCAGGCGC
GCGGGCTAAAAAGTTTGTGCACTGCGTCGGGCGGGGCCGCTTGGGCCGTGGGTATGGACC
GAGAGAGGCTGCCCGAGCCCGACCAAGAAAAAGAAGAAAAAAAAGGCTCGGAGTACGTGG
GCGGGGCGGTGCACGGTTCGAGACTTGGTGGACCGCGCCCGCCCGAGCGAGTAGAAAGAA
TCTCGTAACTTTTCGCTGCTTTTGAGCTGGACTGCGCTGCATTGGATTCTTTCGTATAAT
GTCCGTTTTCATCTTTGCTGAAAACCCCTAAAAAAATCTTTGCTGGAAAATTTCTCAACA
AAAAGAAATATTTGCTACAAGAAGATCAAAATCCTAACGCCCTGGCCAGTCTAACAGGCT
TTTAATTTTCTTTTAACTGAAGTAATTTAATATGATCCTAATCTAAATAAGATTTTCTTT
GGAGGATTGAAGGAATAAATCCTCCAAAATATACATGAAGTGCTTTTTTTTCTATGAAAA
CAAGGTTAAAACCATCGGCCTTTATATCATTATAATGCACTCCAGCGTTCTTCTTAACCA
GATGATCCGTTTGGCCTTTGATGTAAAACTCAACTAAAGCCAAGAAGCAAAGCAACCTCT
GAACAATATTTCACAAACTATTTACAAAGGGGCAAAAAACAAATGGAAGCGAGTAGTTAG
CCGGGCTATTTGAAGGATATTCTTCATGAACCATCTACAAGTGAGTATTCGTATTGCGTT
TGAATTTGTGAAAAGTTTCATTGTTGATTTTTTTCTCGCGAATACGGAAAGATTTCGTAT
CATTTCATTGATAGGTAGGAGAGAACATTACAGCGGGGAGAAGGGAGGGAGGACACCGCA
CCAAAATGTGAGAAAACATAAGAAGAGAAACAACACAGCCCTAAATTAGCCTAGCTCAAG
AACTTGAACCAAGAAAGGTGAGGAGGCGAGACACAAGACATCAAGGTCGCGTCACGACCA
ACGGGAGGCATCCACAACACGTGGCTACAACTCAAAGAACCAACCGAATCAACATACCCC
CACCCCACCAGAAGCGCCTACAAGAGTCGGCAAGAGGGTTGCATGACACGGCCGGGTCCG
AGAAAGGAGCAATAGAGGACGAGTCGACGATGTCATACATTACCCCCCGGATGCCCATGC
CTGGAGGAGCACCCACACCAAGCACGACACCCGACAACTCAAAATCCAAGACCAGGAACA
TCGCGAGCAGCCAAGACAACATCTTAATGAAGGGGACGGTGTTGTGAAGCCATTGGTGCC
CGATCCATATAACTGGATCCAGGGTTTCCCCCGGTGCTCGGAGAGGGGACAAAGAAGGTT
CTGGGAACGTCTAGAGGAAGAGGACGACATGTGCAGATGTCGCCGCCGCGAGCACAACTG
TGCAAGGATTTCGCCCCTGCCCGTGATCGAACAATCTGAAAGCACATATGCTCCCTTNNN
NNNNNNNNNNATTCATGACAACATACATTTTCTCTTAGACTAATAGCTTTATCTAGTTCA
TTTCAGATGAAGTCCAGAGAGAGAATTGTCTGGATTGTGAGGAGAAGCCCCAAGGAAGGA
GAAGAATAGAACTGGCCAAGCTTCAAGCTTCAAGACTCTACATTTTGCTTTTATGTGAAA
ATCACAATTGAGTCCATAGAAAGCCAATACATTGTCTATGATGATCTAGCTACTCAAGTG
CTTAGAGTTAGCCACCAANNNNNNNNNNNNNNNNNTCCCACAAATATTCTGTCCAAAGCC
TAAACACTTAAATTTGATGCCACCAATATTACCAATTTGGCTCTACCAAGTTTTACTATA
CACAAAATCCACAACCAACCTAACAGTGTCGGTACCACCAACTTTGATTTCGGCTTGACC
GAAAAATAGTGACCAACTCCCTCGTTAGTGAAAGTGCAGTCATGCCCTTAATCATGTTTT
GGTGTTGCTGACAACACGCATATAGATAATTAATCACTAA