Map Locations of contig_1564733 (11129 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1564733

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_13072 2 2012 bp MLOC_13072.2 Available Available LOC_Os07g02760.1, FRAME:-3, EVALUE:3e-133, 13107.m00204 protein OsFBD13 - F-box and FBD domain containing protein, expressed





CDS Structure of MLOC_13072






Contig Sequence (11129 bp)

>contig_1564733 11129 assembly3_WGSMorex_rbca.fasta
CGCCGGCTGTCGCACGGGCTTTGCCCGGTGGAGAAGCCCGACGGCGGCATTAGGTTTCGC
CCGAGCCGCCCCCTGGAGAGCGACGCGGACGCGAGGCACTTAATTGATTAATCTTCTATG
GGTTTTAAGTTATGATGAAGAAAAATCATTGACTTGTTCATATACTAATACTAGAAATTG
TTCTACGTTTGAGGCTTGTTCAAATATGTTTATAACTAATACCTCGTGAAGAAACTACAG
TCCTCTTCTTTAGAGAGTCATCGTTGCATCATCTTCGTAAGCAGGACACAAATATAAGTC
GACCCTAAAAAACATCTAAAGCAGATCATGGCTTCATGGTCTCCTAAGAGCACAGAAGAC
GAGACGAACGGGGCCGATGGGAGGAAGGAAGCTCTTGTCACCTGGGAGTTTGTCTTTCTT
AACCACAATCTTTTTGACGCTCAGGCCCACCTCTTTACCTATTCTCTTGTCTAGGAACAA
AATTTTCTCACGTGATGTCAGATGTGCCGCTGCCACCACCAATGGCTTGTGTTTTGCAAA
GCAAACAAATACGTACATCACTCCCTTTGTGATAGAACTTTGACAACCTGAAACGTATGT
TGTCTCTACGTAAGTAAACTTCTGACCCGGTGACATCAACCCCCGTGTCCATATTCCTCA
GTGAGCCATGTTATTTCAGGAGGAAGTGACCCCCTAGACCACATACATTTCACCACCGTC
AATGTCACCTGGTTTACCAATAAGATACTCAGCAAAAAATCACTTTAGCTGTGGATTCAT
CGTCACATGAATACTTTGTGTCTGTTTATTTTCTAGATAAAGGACACTATTATTAATGCA
AAATATACTTTGCTCCAAGTGCGTACACACCATCGTCAACAGCGTCAGTGTTTCATTTGG
TGTAGTGCAGACCCCGTCCAAAGCCAATTCATCCAACAGCAGATAACCTGCAAAGGAGAT
GGACTTTTGCTTTAAAAATTACTCCCTCCGTTTCAAAATAAATGTCGCTGCTTTAGTATA
AAATTTGTACTAACTTAATATTAAATTTACATCATTTATTTTAGGACAGAAGAAGTATAT
CATTTCTATATAGCCTAAGTGACAGACGTGTCCACCCTCATCAGCGTACAATACTTATTA
TGTCATTGAACAATGATCATACAAATTGGCAACACTTCTTGGCGAATACATATTCGAATG
AATGCGCGTGTAGAATTCACAAATTTGTAGTAAAAGAAGAGGTGTTTAATTGTTTAGTCA
TGAGCACAAAAACAACACTTCTCGCTCTCTTACAGCTGCAGCGAAAGCGAGTAAGGTTGT
CTTTTGTCAGCACAACTTCTTTGACAAAGATACCACATAAAAGTCTTTCTTCCATTGGTA
TATTCAACTTTCATATTTGTTTTATCATTGTCCACTGGTTGCGAAACCGACCGGTACCTT
AAAGTCGATGCTCATTTTGTTAGATTTCAACAAAACTCATCCTCAGCCTTGAGATAATCA
ACTCATCAATCATACATAATTAACCAAGGGTGACCTACCAACAAGAATAAAAGTGTAGCC
AGGAGCACTAATTACTACCTCGGGCTAGGAGTCCTGTTCTAGCAACCTTATTTGGAACAC
TTGCCCTCTGCAGTACTACTAGATTCGAAGTGCACTCGTCACATGATAAATACTACCAGC
TTTGTAGCAGTTGCTTTGTATATTAATCTCGCATCTATAAACAGCTTATCGTAATTCACC
CAACATGAAAGACCACTGGACTTGTAGCTTCATGACATGAACTCATATATGAGACCAAGC
TACTTAATTTCAGTCCGACAATTCATGAAAGAGCCATACCTTTACAACAACAGAAATTCC
AGCAAAAGATATCGAAAGAGAGAACTTCCAATCCCAGGTACCATTACAATAACAGAAATT
CATAGCAGAAATCGCCATGAGACTACTAAATAGCAGTGCACCCCACTTAACAGATGCTCT
CAGCATTGTTAGGAATCAGGGTAAGCTGCTAATATTCTAGCAAATTAATTAGCATCCATA
GTTTCATACAGATTATTGAGATAAACATGCACCCCAGAAAGGCAATCCCAACAACATTGA
CATATTCTGGCAACATGAGTTCGTCACCACTCCTGAACATGCTTACATTAGGACCAAGCA
AACTAGAAGCTTGTGAAGAGAATTGGCAAATCAGTGTGTTAATCTTCAGGAACATACCGA
ACTTTCCCCACCAAGCAGCGGTGCACATAAAATTCCATATATAGTTCCGATGTGGAGAAG
CTTCGTAACATCTGGCACAACCCCTTGGCCTTTCTTTCCGTAATTGAGTGATGAAAAGAT
ACTGTCATCTTTTTTAAGGCCGTTGACCAACTGAATAACAGTTGCACAAAATCACGTTCA
TGTTCAGTTCCTGATAGTTCACTAATTTCTACTTCTTGGAGGCCATCGAGCACAAGTTTC
TCTGTTTTCCAGTGTGTTGGCTGATCACAAATGCAACTCGATGGGCATGGAGTCTGCGCC
TGAAGTGAGGAGCATATCAACTTTGTAAGATTAACCGGTACGTTTCATGACGAAAAAGAC
GAAATTATAATTTATCAGACTGCTTGAATATTTCGAGATGCGTCAGCGCATTTACAAAAG
AAAAATAGCATGAAATAGTTTGAAGCCAGCATACTGCAGAAAATAAGTTTGTTCTGTACA
AAAGAAACTGGTACGACAAACCCTATTATAGAAGTTACACGATTTCTTAAACATGTGATG
TTCAGTTTGACCTTTGGACTTCATTGTCAATGAAACCTCTTAGAAAAGGACATGGAGTTT
TTGGTCCCGAGCTCATATGCTCCCTCATGAAGAGTGAAATCAAAAAAAAATAGTAAAAAC
ATTCAAAAAATTCTGAATTTTTTGTGATAAACTTTGACAAAAGTTTTGTATGCTTACAAA
AGTTCAGCTCGAAATAACATTTGTGGAAGTCGTGACGAAAAAAACAAAATCGATGCTCCA
AAAATGCTAGTTTTGGATACATTTTGGACTGTTGATTTTGTTTTTTTCGCTGCGACTTTC
AGGAATGTTAATTCGTGCTGAATTTTGATAAGCATGTAAAACATTTGTCAAAGTTTACCA
TAAAAAAATTCAGAATTTTTTAAAGCATTTACTATTTTTTTCAATTTTACTGTTCATGAA
GGGGCATTTGAGCTCGGGAGTAGAATAAGACTTTCGCTTAGAAAAGCATATCATAAGAAA
ACAAAATTATCTCCAAGTACTTGCTTTAAGTGTGTTATCAAGATTGAGTGTGCGACTGAG
CCTGCCAGGCAATATATCGTCACATAGATTAGAAAATGGTACACCGCTTTGCTAAACTTG
AAGATGAAAGTACTAGCACTTACATGAGCGATGAGCGATATAATTTCCACAGCTAAAGTT
TGGACACAAGGTATTAGTATCAAACCAACACCTAGAGTAGGTCAACTGGAAATCGAGTCT
AGGTATGCCGAAAGTGCAAATGTGTAATTTTTATGTGACTAGCCTGATAACTCGAGCATT
ATAAATGCTTAAAAGAGTTATAAGGAAATTAAGGACAGATTTACCTCAAAGTAGTTGAGT
GTCAACTTTCTTACACCAGTACACAGTCTGAGAATGTGGAATAAGCTGGCGCCAAAGCAA
TGTCCGTTTGACATCAAGGTCAGGGACAAGCATGTTACGTCAGGGAGCCTTGTCATGTCT
TCCATCAAGTATCGATCGTTACCTATATCCTGCAGGTTCAGATGACGTCACAAAAAAATA
TTACATGTAATGTCGAGGAGCCTTGGCATGTCATCCATCAAGGTTTGTAGGTAAATCACA
AAGGAGAGTAATGTATCACAATCGAAAAGTTCATTACCTCTTGGATAACAAATATTCTAG
TCAGAAAAAATCAATACAGTACAATATAAGAGATGAACATCAACCGCGTTCAGGCTCAAT
ACATGTCTGTTACAGATATTTGAACAAATAGAAGTATAGCACAAGCGAGAAATTTGCATG
GCTGTTCTAGAATGCGATATTGTCCCGTTGACACATTCCTTCAGTTAAACTACATGTTTG
TCTCATTATCAATTGATCACATTGTCCTAATGACACATTATTTCAGACAAACTACATGTT
TGTCTCATTATCTATTGACTTAGTAGCATGACATAACTTCACATATAAGATTGAACTCAC
CGGATTATAGAGCAGTAGGAGGGTTAGACTGTGCATGACCTTGAAGTCCAGCAAGATCCT
CAGGCAATGGAGATTGGGTGTAAAATCAACCGGTCCATATACAAGAAAAATGCCAGCGTG
CAGACATTGTAGATGTGCCATCTCGCCAATTTGGACAGAGCATGGATCATAAGCATCATT
CCACTGGAGCGACATCAGCTGAGGCGCTGAGATGCTAGCAATAGGTTGATTGGGACCAAA
GCAAAGGATCACACTTAGCTCTTTGAGCGTCGGTGTCACGACAGTGAGCTGCTGCAGGCC
ATCTAGATCATTCAGCTTCAATTGCATTAGAGACTCTGAGCGGATGGTGAATTTATCGAT
GCCTCGAGCATCGTTGATGGCGAGCCTTTTCAAGCATGGGGAGCAAGCCGAGGATACAAC
GTCACCCAGCACGCACGGACCCTGTACCTGGAAGCTATTCAGGCAAAGATCGGTGAGCCG
AGAGGATATGGCGGAGGTTGGCAATGCAATGCCAAGAAACCCTAAGTGGAGCGAGATCGA
GGTGGCGTTCTGGAAGCATGGCAGTTCAAAGGCGCCTATGTCCCCGGCCTCGTCGTTCGG
CGACACATTGTTGATGAAGAATAGATCGCCGGCGAGGCGGCGGGCGGCGATGGGGAGCCA
CGCGGCCATGAAGTCGGCAGAGGCGTCGCTGGCGAGGACGCGAAGAGAGCAGAGGGCGGG
CGCTTGATGGGCGGCGAGGACGGCGGGTACGCTGTATGGGTTGGTGTCGGGGAGAAAGTC
CAGGCCCGGGAGGAGCGGCCAGAGCCGGCGCCAGCGGCTGGAGAGGACGCTGGTCCGAGC
GGCGACGGCGGTGTTGCGAAGCTTGAGAAGGATGTGAATGAGAAGGTCGTCGGATAGCAA
GCTGAGGAGGTCCTCGCTGCCGTTGGCGGAGAGCCTGGCTCGCTTGGCGGGGGCCTCGCC
GTCACTGTGCTCCATGGCGGAGGGATTTCGCGCAACTCACATCGGGTTCCCGCTCACGAG
TTGGGGATGGGGAAAGAGCGGCGGCGTGGGATAGGGATGGGATGGGTCGGCGTCGAGTAG
CGGGAGCGAGTTGGGACTTGGGAGAAGGGCGGCGCCGTCGCCACTGCGGCCAAGGGACGG
ACGTCAAGCGAACGCTCAGGCCCAGGAAGCTCAGTGAACAATTTCAGCCCAGCAGCACAA
CGTTGAGTTTTCTTTTCTTTTTTGTCAGGCCCGGCATTTAAAATAGGGAACCACTAGCAA
GATGGCTATATTTCATCAGACTAGTCAATCACCCTTCGATTGAATTGTTTTGAACCGTCT
AATTGTGTCAGGGAAGCCTGAATGCATCAACATGTTCCCAAAACAAAAACTGCTTCCCAA
AAATTACGGTAATAACTCTTTTTTTTTTTTGGTAAGCCGTGATTTGCTTCCACCAAATAA
ATATAGAATTAATTCTTCCCAGAAATTACGTTACATACTCTATTTTCTTTTTCATTTTTT
TTTTGGTAAGTCGTGATTTTTTTCGAGCAAACTAATACAGAAATCAATGCTTAGCAAAAA
TTGGAGATTTGCTTCCAACAAACAAGGTAAAGGAAAATAAATATTTATGTAGATGCTTTA
TATGTAGCGCATGGATGGCATGGAAAGTCCTATTTTGTTGATAGAAGCATCGTGCAATAT
GCTATGGAAATAAAATATTTGATAGTGTGATTGATTTATTTGTTTCAGCGAAGCATTATT
CAAAGTTGCGCTACAATTTTTTAGATGCTTTGGAGACATTTTTTTGTGTAACAAAAACTA
TATTCATGTTCGATGGAAACATTTGCTTGGCAATGAAACTTCTATGGATCAATGACATGA
ATATACACGGATGCAAATTCATTTGATGCGAAAACTTTACAAGTCTTTTTTTATAACAAC
ACAAATTTTACTTCTACATGGATGCGTAAGTGTATTTTTTGTTTTGTTTGTGATGCAGTA
GAAATATACTTCAAAAAATCAGATAATTTCTTTCATCGTACCACGGTTTCAAGGATGTTT
GTTTCCATGCAGACTTATTTACCATTGAAACACATCATTGGTTTAAAGCGAAGTGAACTA
TTGCTTCCATAGAAACTAGAATGTGCATCGAAAAAAATTCAGAATGTGCTTCCATAAAAC
ATAATGTGGCATCTAGGCACAGTTCAAACACCGTCAGCTAGACGCAAACCATGCTTCCTT
TCAATGTTAGCCGTGCTTGTTGTGATGGTAATGGTTGCTCCCAATGTTGGCCATACAGCC
ATGCTTCTTTGCAATGTTGGTCATGCTTCTTTGTGATGGCAATCGTGCTTCATTCCAATG
GTGGATGTGTCTCCTTCTGTCACCACATTGTTAATTAGTTGCATCAAGAAGGTTTGGCAT
GGATGGAGTGGCGCTGCAGCTGCACAATTAGCCGACGACCTTTTGACAACAAACTCGGTC
AGTTGAATATATCAAATTAAACCAAGGTAAACTAAGGATGTGAGGTACCATTTCGTGCAG
CCGACCGGACGTGCTCCCATCACTATCAAGAAGGGATGACACTCTAGGTACAGGAATCAA
TCTCCTGTCTCTTGATGATTCCTCAATGTTTGTCCAGCATTCCTACTGGGATGGGCATCA
CGTACGGCAACCTGCTCATTCAGCACATAAAAGGATAATAACCAATCACAGCACATAAAA
AGATATTGGGAATTGAATCAGGTTATTGTGATTTGCACAAAAAATTAACAAAAAATCGTA
GATGACATAGTGATCCATTACACATCGGATATAACATAGATACACTCAAACAAGTTTCAT
CGAAGCAAGCATTGCAACCAAACTAACGCAAATTAGAACAGGAGATCAAATCTGAACCAA
AGATGTGATTAATCAACCCTAGTTTGGGTGAGTACATATCAGCGGGACGAAGCCTGGGAC
GTTCGCAAAGCTTCTTTGCCGAGCCAAAACGGCGCACCGCCGCGGTGGGAGGGATGGTGA
TGAGGAAACTTCTGGCGAGGGACCGGGGCGGTGAAGTGGGCATGGTCGACCGAAGGTGAG
AGCAGGGATCGATGGAGAAGATGCGGGCGGGACGCTACACCGATGATATGGAGCAGTTGT
AGCCGTCACGAGATCTTGGCGCGGAGATGGCGGCGGAAGTAGCCGCCGTGGTCACCACGA
GCTCATCCGTGGGATGCGAGATTTACTCGCCCGACCTGGACGTTGTGAGGTGGTTGGGAT
GGAGTAGGGTGCGAGATTTACTCGGTAGATGGATTAAATTGTGGGATTAATTGAGGAGAT
TGGAGATTTGTATAGAATATGGACCGTGGGATTAAAAGTGAATCAACGACGCCGGACCGG
TGTGACGAAACTTTCGTATCAGACTTCTGATAAGAAGTGTTTCCCTTTAAAATAAGGATA
ATTGATTTTATTCAAAAAAATTGGGTCATACTCGACTTGTTTATCCCTAGCTTTTGAAAA
TACGTGTTTCTTTCCAAATCACTTTATTCGTCTTATGTTATTTTCCTTGACCATTTGACC
GTCATTTTAAAAACTTCATAACAAATTCATACTAACTCAGAAAAATGCAAATGAGATATT
AAAATGTTTAGAAAACATCACCTATATGTTCATGTCATTTACATTCATGGAAAAAGTGTT
GGAAAGTCCCCATCACCTCCATGAGCTAAAACCGAGATGGAGACTTTTCAACATTTTTCT
CATGAATGCAAATGTGATACACATATTGGTGATGCTTTTTTGAACATTCTGGTATCTTAT
TTGAATATTTTTTGAGTTATAGTACGATTTTTTTTATGAAGTTTTGAAAATAACGGTCAA
ACGGTGGCAAAAGCATAAGACGAGCAAAGTGGTTTGGACAGGAACGCATGTTTTCAAAAA
CTAGGGATAAACCGGCCGAGTGTGACCCAGGTAGGGGCATAAAGCCAAGTATCCCTTTGA
AATATGGGAAAAGCTTGCGTTCAACCGATGGATCGCGCAGCACTGATGCGTCGTCTCCTT
TATGTGACGTTTGTTCTCTGTGTGCATGTTTATGTAACTAGACAATACCCCGTGCGTTGC
AGCGGGATGGTAGTGTAATAAACAATTTTAAAAAGTGGAGCACACGATAAGGAGAAAAAG
AGTAAGAAACAAGAAATAAGAAATGTTTTGCAAGAAAAGATAGCTTGGATTTAATGTGTA
ATTCTCAAATCAACTTACTAAGTACGATGAGTTGTGTAACCAACTTTGCATAGGATTTTA
GCTTTGATCATCTCAACGGAAAGAAGACGACACATCTGTTGTGCTGCTAAAAAAGTAGCA
ATTAATAGTGCAATACAAATTACTTGTGTGCACCTTTAATGAACTCCCAACACTAATCTT
TCCGGGTATCTGACTTCGTTGAATTTACATAGTGCTATATGTATGTATAGCATCTAGATT
GTAAAATAGACGTCGTCGCGGTTTATGCTATAATACGTACAAAGGTAGCATGAGATTTAA
GACTTAAGAGCCATACATGAAGGTTGTTTCTTCTCTTTACAACAACCAGACGTGCTGCAG
TTGAATCAACCGATATTGTGAGGAGTAGGTGGAGCCTGCAAGCAAAGGACAACGAGGCAT
CCTGGGGTGACACAATGCAATGACCTGCTCTTGGTAGCGGATCAAAATTAGAATGTGGGC
ATGATTGATCCAGTTGGGATGCTTGACACTGCGGAGAAGGCGAGCCAGATGGACTGATCG
AGGTGACTTCATGGTGTTGCATATGGCAACATCCTTAGTGCCAGGCGCCCTACGACCGCG
ACGCCTCCGTCTAATTTGGTCGGCATGATCGATGAGAAGAAGCGCTTCTCCCTCTCGTCC
CGTCCCGTTTTTGTCCCTATCTCGGTAGCGACACTGTCCATGACCACAACAAAGTTGGTG
CCATCGTCCTCCCACACAGACGGTGGCCTATGAACCTATAGCTATGTACAGTTGTACCAT
GCCCACGTTGGTCTGGGTTTTTCGCAATCGAGCAAGGGGAGGAAAAAATCATGAATCCTC
GTCGGGTGATGAGGTCATTGCTATTTATTAGAAGAACTCATGTGAGAATGACATGTTAAT
TACGAGGGAATGAAGCGATGGATTCACGTGTTACTTGTAGAATTGTTTCATGAAGAAGTT
GAAGATCAATGAGATAGTGGGGGGTGAACATCCAACCGTTTTTGCCGCTTCTTTTTGCCG
TTTTTGCTGCTTCTTTTTGCATGGAGGAGAGAATGTGCTCACGGTTAGTAAACAGAAGCT
AAGAAAAAACTTGAAAACATAAGTTATGATATGGCATCACGGTAGAGCATGGAAATTCGG
TAGTTTAATTGCATACTTGTTGATATGCCATGATAGCTGAGTTGACATGTGTACATGTCA
AGATAAATAGAGTAGTGAGGATGACTTTATCCCCGCCCATTGTTGTGCTAACTTCGTTAA
AAATGCGTAAGTAGTTGCCAAAAATAACTAAATATAATGAAAAGAAAGAATAAGGTTGAA
AATCAATAAAAGAAAGTATCTAAAATAGAATAAAAACTTATTTTTGCATTAGTCTATGCA
TGTAACGCCGTCACATCATATATCCATGTTACTCATCCTTCACATTTTTGTTCGAAATGA
CATTTTAACTATAATTCACTTGTAATTTATAAGTTAATGCATGACTGGCTTATGTGACAG
ATTTTGCATGGCTTCATGAGGGATATGACTTGCATGCATTGCTTAATGGGACGTTGAGGT
GGACATTTTGCATGTTGGAAGAATTGGGACCAAATGTCAAATAATATAAGATTCTTTCTG
CAACATTATGCATGCTGCAAATTGCCACCCGTAGCAACACCCATGTTACAAAAAATAAAA
TTGAAGACAAGAACTATAAATATTTTTGCAACATCATATGTGTTGCAAAATTTCTTTTGC
AACGAGACCCATGTTACAAAAACAGTGAATCAAACAAATCTGCAACATCGAGTCACTAAT
GAGAAAATGCCTACGAGTGGTGGGCTCGAAATGGGCTTCAGTGACGGGCTTGGGGCCAGG
CAGGCCCGCCACTAGTCTCCTGCCACTCATAATAGGCCATCAGTGGCGGGCCTAGGCCTG
CCACTGCTATGCAGTCACCACATGTGGGCCCATATTTTGGCCTGCCACTACTAATTTAGA
CCGGGATTTAGTTCCACCTGAATTTAGGTCCCTTCGAACTAAGGCCCGCCATTGATGGCC
TGTTACTAGTGGCAGGCCTAAATTTAGGCCCGCCTGTGATCTATATACCAAGAACAAAAA
AATGTTGTTGTGGCAGCGCAATTTGTGCCATGGCTACATTTTGTAGTTCATATAACACAT
CATTCATACAGATATACATACATATAGCCGCGTAAAATTATGAGTCCATCTAAAACAAGA
AGAAAAACCAATGTGCATTCAGTCCATCATACATGGACAAATGTTCCATAATCATAAAAT
GTTCCATGAAATATGATTCGGTCCATCAAAAAGAATAAGAAACAAGGATGTTCCAGCATC
ATATATGCATGCAACCCTAGATTGTCTTCACTGTTAGATCTGATGCTCTCTCTTAGTGCA
TTGCCTAATAACCTTGTTAAAGACAAGAAATAAGAAAAGTAAGAAGTGCATATACAAAAT
AAGGCAACATAGATGTATATAAACTAGTAATCGTATGATTAGGAAATCATTGTGAGAGCA
TGGTATCATCGAGAATATGGGTACAACCCCACTGATTTTAAACAACACCTAGACATCAGA
ATTTTTGGTCAGGGCTACCTGTGACGCCCTCGATTTAATCGTAGGCTAATCATACACACA
AATGCGTACGATCGAACTCAAGGACTCACGAGAAGATATCACAACACAACTATAGACACA
AATAAAACAATACAAGCTTCATATTACAA