morexGenes - Barley RNA-seq Database

Contig contig_1564335

Source Contig contig_1564335

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1564335 (2009 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1564335

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_12898	1	842 bp	MLOC_12898.1	Available	Available	None

CDS Structure of MLOC_12898

Contig Sequence (2009 bp)

>contig_1564335 2009 assembly3_WGSMorex_rbca.fasta
TTTCCCGTCCTTAAACTAATAATGAGGTGCCTTCGGATAGGACGTATAGGTCAGGTCTAT
GACCCTACTCTAGGGCTATATCTCCGTCACAGGTCGGACGCGCCCACTGTGGACCGAAGT
AACGCGGGTTGGCCTTGCGTGCTCAGCCCACCCGTGCGCCGGTCGCCTTCCCGCCAGGTG
GGGTCTTGTGGTCAAGGCCTGACATATGTTGCACACTGTAAGTGCAGAGAATATATTCTG
ACGCTTATTTAACCCGATAGGTCACACCCGTCCTAAAAGATCCAACGCGCGAGCTTGCCA
CCACACGCTTAGGGTCAGTTTTTTTATGGCTTTTTTAAGCTTCTAGAATAAACCAAAATA
TTTTTTTTAGAAGCCTACTAGTCAAGCCTTAAATAATAGACTTTAAAAAAATTGTAACAG
CTGGAATATTTTTTTAGAAGCCTATTAATCAAGTTTTAGAATAAGCCAGCAAAAGAACTG
GCCCCTAGACAAGCGTACGTGCAGACGCGTAGTATAGGTATCAGTAACAGCTGTACTGCA
AGAATGTAGAGCAACTAGTCCGTGAGTTACGGATATGTAACATCTGAGTTTGATTACTAT
AACGGCTTCATTGCAAAATTTTGAGTATAATCCTAATCTCAACAGTGTAGGCCACCAAAA
ATAGCTTGCTGACTGACTCATGGTATCTCTCGTCATATACTGGTCACTATCAAACAAGCC
GAAGCAACAGCCAGGTTTTCTATCGGAAACCCATGGTTGCAGAATGAAATGATCCAATAG
CGTATATTGGTTATCCTTCCAGGAGGCCTAGTTCTTGTTGTTCTTCTTCGAAATTTTTGG
GTTCTTGGACATGCGGATGCTCTCAGGTGTAACCTCGACTAGCTCATCTTCTTGAATATA
CTCTATGCAGTCATCCAGACTGTAGCTTAAAGGTTCATCAAGAACCACTGCAAAAAAGAG
AATAAATTATTTGAATTAACCACACTTGATAAAAATAAGGTTTCAGTTAAGGTGAATCTA
AGTGTATAAGGACATATCGCTGCAATAGGGTATTGGCCCACTTATCACTTTTCCGAAAGC
ATAATCAAGTTTTAAGTATGCCCGAGGACATGTCAACATTTTCAATATACTAAGGCCCCG
ATTGGTTCAGCGGATTGGGGCCAAATGCCCCGGTGTTTTATGGAGCCGAAAGAAAAAACA
ACCCGTCCCAAAAACAGTGCTTGGCATGTCATTTATGTTTTATTTTGCGCCTGTTTTGTT
TCCGTTACGCCCGGAAAGAGTTTTGGAGCCCAGGAGACCCAATAGAAATACCAGGAAGCA
AAACGATGGGTAGCTCGAGGGTGCCCAGGACACAAGGAGTATCCTAAAACTCGGCTCCAT
GATGTGTAGCATGTGTGTCTCCACAAAAACTTTCATGGTGACCCGCCGGCCACCCCTGCT
GTACTACCCGCCATTGAGGATGGTCGTATGGTGATCATTTGCATTGTCGTTGATCTACGG
ACATTCTATTACTGCCGAGTATTCTTTGCCGCCAGCTTCTTGTGATATGATCTTTGGGAC
ATGCTTCTCTATCCCTCTTTGGCTTGACTCACAAGTTTTCGAAGACCCCATGTTATGACG
ACACTCTCAAGACGCAGATTTTAGATTTTCACTACTTTTTTATTACTATCGAAAAAGGCT
TTCGCCCCGCTTTATATATAAAGCAACGATCATCAACAATCTAGTACAGACACACGCCAT
CACAACACGCGCACACACCCAAGGCATGATACATAGGCGCTGAGCGCAGCAACACCACCC
AACACTACAAGGGCAACCAGGGTCTTCAACTATGAACACGCCACCGCAAAGAGATGAAGC
CACATACGACGAACCGTGGGCTCCAAGACGCCGCCTTCGGAAAGGTTACGACACCGGAGC
ATCGCCACCGCCCCATCCGAGGATCAGAGTTTCCCCAGGAGCAACACGACGGGCAATGAG
AGCCGCAACGACGCCTTCAAGAAGGGAAC