Contig Data
morexGenes
Links



Map Locations of contig_1564328 (3958 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1564328

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12894 1 359 bp AK372691 Not available Available None
MLOC_12893 1 905 bp None Available Available None





CDS Structure of MLOC_12894






CDS Structure of MLOC_12893






Contig Sequence (3958 bp)

>contig_1564328 3958 assembly3_WGSMorex_rbca.fasta
TATAATCTATCTTCATAATCCAGATTANNNNNNNNNNTTATGGTTCCAAACAGGGCCTAA
AGCGCTCGCTCCCACTAACCCCTCTAAGCGGAGTAGGGGATTTTTGAGGACAGTAAAATA
GTAGTTGGCCCCACTGAATGATTCGCTTAGGATGGGAATCTAAGAAACACATTTACGATG
ACAATTTATGTTTGTAGAGCATGACAATTTTCATCTTTTATTTACATTGGTGTAGCGGGC
AAATCCCTTTTGACAACATGGATCAACTTTGATTCAGAAATACAAGACGTTTTTGCAGTT
CCATCAAACTGTAAAAACGTTTTATATTTAGAGACGGAGGTAGTACGTAGATGACAACCA
AGAATCTTTAATTTTATCTTATAGAGAAAAATAAAATATTTATGAACAAGGCGATTGGGT
GCCCAGACTCAGGTGTCAGGTGCACCCGTGAGGAACATGAAATTCAAAAATACACTAGAA
AAACTAAAAGAAAAACTTGTTTCTTAATCGGAGATAATTTGGTATGTAACATGCGTTCTA
AATTTCAGATCATTTGATCATCTGAGTTGTTCTCAACAAAAAACACAAAGTATCGTTTGT
GAATTTTCTTTTCATCAGATGGAGATGTGGCTGGGGCTCAGAAATGGATATTCGTTTATT
TTATTTATTTTCGTTTAACGGACAGGACCAGCTTGGCCACTAGCGCTGGAGCATCTCAGA
ATGACCAGCAGCACTACGCTTCACATCACATGGATGTCTCGTCTGTCCGTCGCCTTCTGG
TTAATTACTTCCCCGCTACCCCAGCCCCCGCGGTCAAGAACCACCCCAACGTGATTGTCG
ATCCAGACATTGTCGGCTGTGTATGAACGATATGCGACAATGCGTCAATCGCCAACGGCA
ATTGAAGCAGACACACCTTTTGCCGTGGCTGGATGCCAACGCATACTAGCTACCGCGCAA
TGATGGCCTGGGAATCAATTAAGCGGATGGATGCTGTAAGATGCTCGGGAGAGTAGAGGA
GGGGGCGAAGTGTGTGCTAGCACTGACCAGCAGGTAGAGCACGCCGGCGATCAGGACCGC
GCGGTACCGGCCGAGGCGCGAGTCGGCGGCGAGCGCGCCGACGAGCGGCAGCACCAGCAC
GGTCCCGGACCAGGCGTTCACGCCGGCGGCGGCGGCTGCGGTGGACATGCCCAGCGGGCC
GGTCAGGTACGTGATCAGGTTGCCCCCCACGCCGGTGAACCCGATGCGCTCCAGGAAGCC
GACGGCTGCACGCACGGCGCGGAGATAGTTAGCTCAGACTGGACACCGGACAATTCAGAG
AGAGAGAGAGAGAGAGAGAGACGCTTAGGGCGAAACAAATTAGCTCGCACGACGATGGAT
GGAGTCATCGTCGCGGCGAATGGTCGGCGAGATTACCGACGATGAAGAGCGCGGCGCGCC
AGCCACCGCGGCCGTCGTGGCGTGGGAGTGGCTCGCCTGACTCCATCGCTTCGCACCTTC
GCCTCTGGGCCGGAGGTGGTGCCCGTGCAGGTGCGTGATCTATTCAGTGTGTGCCTTCTG
CTGGTGTAGAGTACAGCTGCCCTCGGTGGTATTTTATTGCTAGCGTCCACGTGGCCCGAG
TGACGGAGACTGGGCCTGTATAATTCGACCAAATATAATAACTACTCACTGCATATCAAA
ATATAAGACATTTTAGAAATTTTACAAAAGACTAAATATAAAGCAAAATGAATGAATTTA
CATCCTAAAATATTATTACATACATCCGAATGTAGTTTGTCTTGAAATCTCTAAAAAGTT
TTATATTTAAAATTTGATGAGGTACAATACATCAACATCATTATAGTTGTCAGTATAGAT
CAAGTGGGATGCAGATCGATTGCCTTTTTACTTTTACATGCAGCTTGTAAGCTACTCTCT
CGGTTCCAAATTACTTGCCACATAAATATATAAAAATAGATATATCTAAAATTAAAATAA
ATCTACATACATTCATTCTTACGAAAAGTATTTCCGAACAAAAGAAATATATTTTTTTAA
AATTTCACTAGAAGACTACATACGAATGTATATAAGCATATTTTAAAATACAGATTCATT
CATTTTGTTTTGTATGTACTCTCTCTGTTTCTAAATATAAGTCTTTTGAAAGTTTTCACT
AGAAAACTACATACACATGTATATATACATACACTAGAATATAGATTCATTCATTTTGTT
TCGTATGTAGTCCCCTAATGAAATCTTTAAAAAGACTTATATTTATGAACGAAAGAACTA
GTTCACTACTGTAATCTTTAAAAAGACTTATATTTAGGAACAGAGGGAGTAACATTTCTA
CCAGGGACTCCAGCCAGGGAGTCTACACAATGACTCCAACGCGGACCGCTAACTGCATAT
GTGTGAACCGATCCAAACAACAAAGATCATCTAACACGGGTCTGCATCGGTCCGTCGAGT
GATTCGGACGTATTTTTTCTTTAAATCTATGATAAACTAAAGGGGCTTTACTGGTGTCCG
GACAACACGAATATCCGCTTCTGATCGTTTTGGCCCATCGAAGACCCTACTCCTAGTGGC
GGAGCATTGTGGGAACAATTAGGGGTTGTGGCCAACCCTTTCAGAAGCCCAATTTAGTTT
TTATAAGGATCCTGGCCGAGCAGTAGTGCGTCTCAGGCCGCAGCGAAAGCAGAGGGAGAG
GCCGAGTGCTACGTTTCTTGGAAGGATTGATCGGGAGCATGTGACGAGGGACTGCTCCCC
CGTTCCCAAGTCCCCACCCCACAATTTCTTCTTCGTTCTCCTCTGGTCTGCGTCCAGGTC
TTCTTCCTCCTCTCAATTGCTCCTCCCCTAGTCCCCTAAATAGCCAAGTCTTCTTCATCC
TTGGCTCCTCCCCGTCTTCACTAGTCCCCCACTTCCCTAACTCCATGAGCAAGTGGCTTG
CTACTGGATTTTTGAAAGAATCTATGAAAAAAGAGAATGAGATGAGGATTTGGGGGCTGG
ATTGGGAGGGGACTCATGCACTTGCTCATGGAGTTAGGGAAGTGGGGGACTAGTGAAGAC
GGAAAAAAACAAATCACCACCCACATGAATTTGCAAAAATCCAGTAGCAGCAAGCATGTA
GCAGCAAATTCATGTGGGTGGCGATTTGTTTTTTGCAAGTTACAAGTTGTGAATGGTTAG
ACATTATAGTAGCTTTCTCAGCTTGCAAATTACAAGCTGGGAATGGTTAGACATTATAGT
CCATGATGTCTAACTATCCATGCTTGATTCGTATTTTGCTAAATGGTTAGGTGCTCTTTG
AAGTTGCTAGAAGCCTAAATATGCTTAGCTGCTGTTAGATTGCTATAGTTTGTGAATATC
TTTATATATTAATATATAAGTGCATAATCTTCAATGGATACATAGATGAACTTGCATTTT
CTTGTTGTCACTTGATATTTTTTTCATAAATCTAAATCAGTTGCCCCCCCCTCATTCTTG
CTTCACCTTCCACCTCTGCCTACTCCCTCGCCCGCTCTTGTTCTCATCCAATACTCATTG
CCCACATTCATGTTGATATGGAGCGACCGCACTACATTGAACGGACGTGATTTTTCATTG
GCTCGGTCATTGAAGCGACGTGCCGACCGTCCGATGCATGCTCGGCACACTCAAACATCT
GTACTAAACCCGCACGTTGACTCGACAACACCGGATCGAAAACTGTGACCGTCCAGGATT
AGTCCTGAAAGAATGTGTGGTACGTCCGGATTTTGACCAGTCCGCTCGAGAAAAATCTTA
GCTAGAACACTATCTTTCACTTATAACGAGACATTACAAATTCTCGTCCGAAGAGTCTAC
AGTAATTGACCAATACATTGGCTTCTAGCTTAAAAGAAGGGAAAGTCTTTCGTCCCACCG
GCTGATCCGGTGGATCTATCATCCCTTTCCTCGTCCGTCGATCTGGCATCCATCTGAC