| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_1564232
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_12844 |
3 |
4061 bp |
MLOC_12844.1 |
Available |
Available |
LOC_Os02g52640.1, FRAME:-3, EVALUE:0.0, 13102.m06001 protein xyloglucan fucosyltransferase, putative, expressed |
| MLOC_12843 |
3 |
1319 bp |
MLOC_12843.2 |
Available |
Available |
LOC_Os02g52650.1, FRAME:+1, EVALUE:9e-146, 13102.m06002 protein chlorophyll A-B binding protein, putative, expressed |
CDS Structure of MLOC_12844
CDS Structure of MLOC_12843
Contig Sequence (9288 bp)
>contig_1564232 9288 assembly3_WGSMorex_rbca.fasta
GAGGGGAAGGGAGGGAGAGAGAGGATAAGGTGCGATCTGATGGAGGTCTCGAGGGATATG
GACGATTGGTGGAAGCGGTCATGCACGGGTCCACATGATACGTGTTGCGCAAGCGACGCG
GCTTAAACAAGAAGAAAATCAGTTTGTCATTTTCGAACTTAAATTATCATGAGATTCTCT
TCAATGATTTATCATATACAGTAGAGAGAATAAACGAAGGAACGCGGGTTTCTTTCCCTG
TCAAGGGAAGAAATCCAAGGGGCCTCTCTCCGTCAACCCATCTCTGATCGTGTAGATTCT
ATTCCGTATTATGGACAGACAGAGGAGTCTGATCGTGTTTAGATTTGTTAACAAACACTA
TATAACTGAAAAATGCAGGAGTGAAAAGGGCTTTGCGAATTGAGATGTCATGTTTTTGAT
CTCCCCGGTCTCATACAGCCACATTATTAAAAAAAGTCCTACAAATGATCTCTCAAAAGT
AGTCACTTTTTGAAAAAGTCAAAGTAAAATGATAAATAAAATTACCACAACCGATAAAAA
TAAAACAAGATGACTAAAACGCTTATTTTATTATTGAACCATTATCTAAACCGGTTGTAA
TTATCTCGTGCTATCGTTATTCATCGTTTGCACCCAATAAACATATACTTCCTGACTACC
GCATGACTGAGTAATGGCCATATACGAATACAAGCAGTAACTCTCGGAAAAACCGGTAAA
AGTTTATAAGAGTTTATCTGTTAAAAATCATGTCATTTCTGTAGTTTCATATAGCCCAGA
GTAATACACATAGTCATACTACTTGGCTCCACTCCATGAAGTCACGTCCCAAATAACGTG
TTAATACTAGTTGGATGGCTAACATTAAAAGCTAGATGAATAGTTCGTCATCAAAGTTCT
CCTAGAAGACATATGAGAAAGAGGTGTTTTATATTTCCATCCCGATCATGAAACCAACAT
CGTTTACTACCCTCACATCATTATTTGGCTAAGCTTCCTTAGTTAAAATCTCTTCCTTGT
GCACAAATCACATGAATATTTCGATTCTCAAAGAAGCTTTAATCTTCCAAATATGAATAG
ATTTCAGAATTGGACCAGAGTTTATTAGGTCTAAATACATGGACTTGACACAGAATATCC
CATTGACGGATAGTTTTCAATGAATCCTATTCGGCTCATCAGAGAGTTGAACATCCATCA
ACCTCCGCACGAGATGTAACTAGTTGTCCCATGGTTCACCTACTAGGGACCTTGCGAACT
CGATATTTAAAGGGACGAACTATAATATTGTAGAAACATAAGCATCCTTATGTTGCAAAG
TATTGTATAGAGAAGAATATTGTGTGGCTACTGGTGTCTTTCCTAACCAAGTATCTTCTC
AGAATCTAGTCGTATTACCGTTTTCAATGATAAATTTGGTTTAATGAAAGAATGCAACTC
TTGTTCCCACTAGCCCCTTCTAGAAATGAGAGTCATTGGAACTAAACCTAAATCAGAGTC
TTGGAATGTAGGTACTTATTTCGCAAAAAAATGTAACCACATTCTCTCGGTCTCCATCAA
AAGCATGTACATCCATTTGTTGAGCAAGCATTTATTCTTAACGTCCAAGTTCTCAATCCC
TAGCCCACCCTGGTCGTTCGGTCTACATATAATATCCCACTTAATAAGCATGAATTTTTT
ACTTCTTTTCATCGCTTTGCCAAAAAAATCATGATCAGTAGAAGTCTAACCATTTTCGTA
CCCCTACAGGCACTTCAAAGAAAGACGTAGAAACATCGACATACTAATCAACACTAAGTC
AATCAAAGCAAGTCGTCCATCATAAGACATAAGCTTACCTTTCTAACAGCTTAGTTTTTC
AAACGATCTGCAATGCATTTTCACTCCTTATCGGATATGTTACAATGATGAATTGGGATA
CCTACATAACTAAATGGTAGGGAGCCCAATTCACATCCAAACAATTGTCTGTAAGCTTTC
TCTCCTTCCTTGCTCTCCCGAAGCAGAACAATTCACTTTTGTTAAATTCGATCTTCAATC
CTGATATTTTCTCCAAAAGCCATAGGACTAGCTTCATATTTCTAGCCCTTGTCATCTCAT
GTTTCATGAAAAGAATTGTGTCGTTTGCATATTTTAGAATGGACGCATCATCGTTCACTA
CATGGGTACCAGTCCACCTACTTGACCGCCTTCCTTGGAAAGAAATGTCAACATGTCTGC
CACTATGTTGAAAAAAATAGTCGACATCGAGTCCCCTTGTCGTAGTCCCTTTTGTGTGTG
AAAATAATGCCAGGTGGCATCATTTTCCCTAGTCTCAACACTATTTTTTTGAACAAAGGA
TTCAACCCGGTTCTTCTAGGAATCGTCAAAACTCTTCATACGTAAGGCCCGTTGGAGGAA
CGACTGCTTAACCTTATCATACGCCTTCTCAAAATCTACTTTGAAGATAACCACATCTGG
TTTCTTCGAATGGATTTAATATAATGTTTCATGTAAGACAACAACACCCTCTAATATATG
TCTGGCCGACATGGAAGCCGTCTGAGTTGGTTAAACCACACTATGTGCAATCCACTTCAG
TCAGTTATGAGAAATAAGAACCAAAAAAGTAGGTTAGCCAAACTGCCTAGGCAGTCAAAC
AGGTGAATCCGCCAAACGGTCAAGCATCCTTGGGCAACTTCTTTCTTTTTTGTGAGTTGT
ATGCTTGGGCAACCTCTAAGCTGCATTTCACACAAAGACTGAAGAAAGAAAACATAAAAC
GCAACCTCGTGTTTGCGTTCATCCCAAACACATATCTTTAAAATTTCACCCTTGTTTCCT
TTTAGCTGAAAGGCAAATCTCCTATACCCATATGATATGCACAAATATTTTCATTCATTT
TTCCTTTTTATATTTATTTATTTACTCAACAAATTTTCTGGAATTTAAAAATATTCATAT
TTCTTAAATTTGTTCATTTTTTCAGATTTCATTCCGGTTTTCAAATTTCATTTTCCTATT
CTTTATTTTGTTTTCTGTTTCTTTTTTATTTTTTCTATTTCAAGGTTATTTTATATTGTT
TAAACCAAGTTCATGTTTGAAAATTGTTCTTAAATTTCAAAAAAGTTCTTGTTTGAAAAT
ATATTCTAAATTTTAAAAATGATCGTTTTAAAAAAATGTTAATTACTTCAAAAAATGTAC
CGGATTTTCAACAAATATTCTTGTTTTTCAAAATTTGTTCTTGTTTCGCCAAAAATATTT
TTTTTGTGTGTTTTCTTTCTTTCTCTTATTTCTTTTCCTTTTCCTATTTCTTTTGTTTGA
CATTTTCAAATTTTTGTTCTGAATTTCGGAAAATGTTTTCTTTTCCAAAATAATTATTTC
ATAAGAATATTTCTGTTTCAAAATTGTTCACTTTTTCAAAATTTGTTCACGATTTTCATA
AAATGTTTGTGTTTACAAAAATAGTCTCATACTCGATTTTTTTCATGATTTTCATAAAAA
TGTTTTTGTTTCAAAAAGTGTCCAGGAATTTCAAAAAAAAGAATCTCTTTCTAAAATTGT
GTTCACAATTTAAGAATAATTTTTGTGTTTCAATTTTTTTTATGAATTCATAAAAATGTT
CCGTTTTCAACAGTATGTTCAAAATTTCAAAAAGTTTCCCATGTATCAAAATGTGTGTTC
TTTTACGAACAATATTAGAAAATTTGGAAATCTGAAGAAATTATTAATTTCAAAAATTGA
GACTCCCAACTAATGTTTGTGTTTTGAAAAGGAATTCTCTTTCCCAAAATCAGAATTAAA
TTTTTTATAAAATTTGAAATCTGCCGCATAGTGAGGCGAAGCATCCTTTGTGTGAAGCCA
TGACTTGTGGAGCCACAATGAATTGGCCGGCCCAGGCGAGGTGCCCCCGTGGGAAGCCAC
AATTCCTTGCCGCATTAAGCGGCATATAGAAGGCCCCGGACGAAATCACTAATTAGGGAG
TAATCCTTTCAAAGATCACTACAAGTGGCACGCTACATGCATGTCGCTTGTCGTAACCTA
TGAGTTTTTTTCGTAGATTCATATTTTCAAACCGTGTGTCTCGCGGAAGCAAAACCGTAT
CTCTTACAAAAATAATAATAAAAAACACATTTTTCCGTTTCCGAGAGGCACGGCCATGTC
TCTCACGAAATCAAAACTGTACTTCTCGCGAAAGCAAAATCGTGCCTCTCACGAAAAAAC
CAAAAAATATGCTTTCTTGCCTTTAGAGATGTGCGAAAAACGAAACACAAAAAAAAACGA
AAACGCGGGTGGAAAAATAAAAAATTATCAAAGTAAGCGCTTAAAACGTGATACGTGATG
GCAACTGAGAATGTGCCAAATAGCGGCGCATGAAAGTGACTTCCGGAGGACGAGACGTGG
CAGCAAACCGTAGGCGGACGACGGCCCAACCAGGCCGTTGGAGGAAAATCCTGGGCCCAA
ACCGTTCAACGCACTCCAGCCTGGAACCAGCGCGCAAAGCTGCAGACTCGGGAGCCACTG
GAGCTACGAAGTAGGAACGCCTCTTGTTCCATATCCACGGCTTTGATCCGTCCGACACAC
CACCCACACGCCCCAGCGGAACAGCAGCAGCTAAGGAGCGAAGGACCCTCATCGCCGGCA
GCAGTCAGGCCAGCAAGGCATCAGCCAGCCGAGTCCGGCGACGGCCATGGCGTTAGCAGC
TAACGCACATGGAAGAGTCTGCACCCTCTCCTCCAGGCCGCCCGCGCCTTTCAGCAGCAG
GAGCACGGTCGCTATGCCTGGGCACCATTCTGAGTCGCCGCGAGCCCGGTTTGCTGTCCG
GGCCATCGCGGAGCGCGCGACCTGGCTGCCGGGGCTGGACCCGCCGGCGTACCTCGACGG
CACGTCAGTCACCTGTGGCAATCTCTGCCGGCGGCGATGGTTGGTTGATAGGCTGATGGA
TTTTGCTTGGCGTTTGTTGTTGTAGGCTGCCTGGTGACTACGGGTTCGACCCCCTGGGCC
TCGGGGAGCAGCCTGAGGACTTGAAGTGGTACGTCCAGGCCGAGCTCGTGCACTGCCGGT
TCGCCATGGCAGGGGTCGCCGGCATCCTCGGAACCGATGTAAGCTGCTCACTTGACCTCT
TTGTTAATTCCTGCAAAATGCCGACATGTTCTCAGTAACCATAGCACATTAGCACTCAAG
CTTGATTTTGCAAAAAAATAGGTGTAGGGGTGCCTAAATTAGGATAAACTATGCAAAACT
GAGTGAGAAACCCAGCATGACTTCTGAATTTTGATAATGGAAATGGAAGGGTGATCCCCT
CTTGTCAAAAAAATAAAATAGGAAGAGAAACCAAAGATATGAGACAGGGAACTATTGATC
CAAATGAAAATAACAATCTCAACCAGCAAAATCATATCCAACATATCAGCTCCATAAGAG
CATCTCAGGATTTCATTTTCCAAGATTCATAGTAGCATTCTTACCACATTGAAGCATCCT
TGCTTACAGGAACCAAACATGAAATCGATGGCCTCGGTGCTCCCCTGAGCTTCTATCATA
CAGCATGGTCTAATTGGTGTGTTTCTGTCTAGTTGATCCGTGTGTCAGGAATCGGCAACC
TACCAGTGTGGTTTGAAGCAGGTGCCACGAAATTTGACTTTGCCAACACCACAGCACTCT
TCTTTGTCCAGCTTCTCTTGATGGGGTAATTCAACATCCAACTGAAACATTGATTCAGCT
GTATAAGAGTTCTCCCAGTAACTCGGATGTTTTAAATGGTGTAGACTGTAATGACTTCAA
ACAGGACAAGACTGACCTGTTTCTATCATAACTCTGATCCTCCGCAGATTTGTCGAAACC
AAGAGGTACATGGACTTCGTTAGTCCAGGATCACAAGCAAAGGAAGGGACATTCCTTGGT
ATAGAAGCTTCACTTGAAGGTTTACAGCCAGGGTAAGTGCTGCAAAATCCTCCAAACCAA
AGACTGAAAACATTTCCCCTGGCAAGTTTCTGGCTCTCTGCTTTAATTAAATTACCATCA
CAATTCTCAAATCTGAACAGGTACCCTGGGGGTCCACTATTTAACCCAATGGGGCTGGCC
AAAGATATAGAGAATGCGAATGAAGTGAAGCTGAAAGAAATCAAGAATGGTAGGTTCGAT
GTCTCTAAGTACAATTGCTTGCAAGATAATCCTGTAGTAACATTTGTAATTTGCTGATAT
TATTTCTACCAATCGCAGGGAGGTTGGCGATGGTTGCTATGCTTGGCTTTATTGTGCAAG
CGTCCGTGACTCATGCTGGGCCCATCGATAATCTTTTGACCCATCTTTCAGACCCGTTCA
ACAAAAATATCATTCATGCACTAACCTTGTCTTGAAAACTCTTTGTCTCGAAACTTCGTT
TATTTTCCCTTGTCCTCATCTGAAGGTGTGGCACAACAGACCACTATGGTTTCTTACAGG
AAGCGCATTTCTTCTCAGGTCCCTTCGTTTGCAAGGTTCTATTAGTCACAAAACTGAATG
TGGAACTTACGTGGGAGGAACTATAAAAAACTTACTACACAGTTGACAGTACAGGTGCGG
TGACAAATTGATTTTCTTCAAATGCAAATAAGATACATTTGTAGTTTATCGAAACAATGG
TGCTTCTTGTCCTTGCAATTGATCCTAATATGCAATCTATGCTTGCGCTTTTTCCGATGA
AACTCTGTAATGGCAGCATTTTTGCAGTTCTCAGATATGGCAGCTTTTCGGCAAAACTCT
GCCGCAGCAGCAGAAATGGCATGTTTTCGCTGTTGCCGCAGAAAAATGCTGCCATGGTTT
TTTGCATATGCTTCAATGCAAGTAGCAGAACACGAAAATAATACAGACAAGGAAAATTAT
ACTAGCATGTCTTGCAAGCTGCAGAGCATATCTTTGAGAACAAATGCAGCAGTTCATGCA
ATTGCATCTATATCAATCAAGCCAAAAAAGGCTTTCCTGTAATATAGAAACAGAGTTGTA
CCCTATATCACACAACTAAGCATATATTAGCTTGCACTATACATATATGAATTGGATAGA
AAACACGCACCACATCTACCACTAACTCGGATTGACTAGCTTAAGCCCCCAGCTCATATC
TTCACAATGTGTTACATGCGGGACAAGTTTTCCCGTATCAACTCCTCTCTTAGCTTTGCA
ATCATAGAAAGGTGGAGCATGGAAACAAGGTTCCATGGACAGAACTTGGCGGCAAGGCGG
GTCAGGGGCAGTGCGGTTTTCAGGCTTGAACAGAAGCCATGGCTTCAAACCACTGAGACC
CTGGGCAACATACCCAAAAGTTGACCATGCACTAGTCACCATGGCATCAGATAAGCTTAA
CAGATATATCTCTGCCCAGGCTTTCCTGTTGTGCATTTTCTTGTCTGAGTTTTGATGTTC
CTCGTGACTTGGCTGGTGGAAGCTAATCGTCTCACCATTTGCCGTAGGATGTTCCCAGTA
CATGTCTCTGAATTTTTCATAGTATCCTGAGTTTAAAGAAGTAACTAGAACAACTTTCGA
CTTGGCCTTCGTTGGTGAGACCATTGGCTCTTGAGTATTAACCTCTGGCAACAAGTGTTC
CTTTATCGTACATGCAAGGACCTGATCCAGGACATGCTGAAACGGACCAGTTTCCGTGTC
GAAGACTCTGATCTGGATACCCAACTTTTCATCAGCTCTGGCAAGATAAGAATCATAGTA
TCTCGTAATCATGCCCCAGACGGCATTGCTAGGGTGAAACAAGTAGCGTCCCAAGTGATG
GAAAACAGCATCTCTCTGGGGGAAAAGCTTCATGAGTTCCTCTTGGTATGCCGGGATCAG
GAAAAGTGAAGGTACAAAGTAATTATCTGATTTCAGGATCAGCCATGGGATTGTTCGAAG
ATACTGCTGATTATCTTCACAGAAGAAAAGCTTATCGTATTCACTATAGTCATGAGCCAA
ATGAAGGTAGACAAAAGCAGGGCTAGGGTGAACAACTTTACTCTTCAGCATGTTTCCATA
ATTCTCGGGAGAGCCAGTGCTGAAGTTCTTGAACTGCTTAATGGGGAAACCAGACGGTAG
CAACCATGAAGTCTCCGGAAATGGTTCGCAGAAGAGATCTGCGGTGCCTTTATCTTCGTC
GACAAGTAAGACTCTGTTTGTAAGGATGGCATACAGAAATGCTGATGCAATTGTCAAGAT
CCTGTTCCCTAGACCACTGTAAGCTGTCCAGACCAGATAGTTGCAGTCCATAACCTTAAT
ATGCTGACCAGACTTAAGCTGGTCAATAGATTTCTTGTATAATTCAGTATGCGGGCCGCA
CTTCTTCTGGAGGGCCTCTTGTTCCCTTAGTCTTTCCAAGAGGTAGGTAGATGGAAAGTG
GGGCGATATTCGACGATACAGTACTGATTGGTACCTACTTAGGCATGATTGTTCATCAAA
ACCAGGAACTAGCAAGCCTCCAAGTAATTTGTCCCTGACAACTTCCGGAGATCCTGAGGT
GCCATCTTCTGAAAACACAAAAGCAGAAAAATCTTTGCATCAGAATTCATGTACAGAACA
TATATAAACTAGACAAATCTGACACTGACACACTGTTTGTCATGGCAAATGATGATAAAG
TAATTTAGCATCAATGCTCATGTGCTATGGATATCACGTTATACGAAGTAATTTAGCAAT
TAGTACAAACACACACACACACATGTAATGAGAGCTCGGGGCAGCATTCAGAACCCCAAC
CGTTCTGCAGGCAATGGTGTTCACTGCGCTCATATTGCACGATTACCATCACACACTCTA
AACATCAGTAAACAACAAGCGTATCAAAACCTAGCAACTTGCAACATTTCAAAGTTTAAG
GGCCACACTGACGCAAAAAAATACTGGGAAAAGAACTCGGGAAGTTTTGCACATGTCGAA
ACAGAGGGACAGAGTCATGGAGCCCAGACGTTGAAGGCGCCATGCTTGGCATTCCTGAAC
GTAACGTCGCCATCCACAGGTAGGTACCAGTACCACAGTACTAGCCGGAGAGTTCAGAGT
TGCCTTACACGAAAACCTGTGGTCCGGCCGAACTACAAAAATGGAAACCGTCGCCGCCAT
ACTTTTGGTTCGTTGCCGCGTACGGAGTACGTACGTACCGTCTCGCGGCGGCCGGACGGG
GCGCGGGCCATCGCGGCCGGAGGAAGGACCCGCGTCGAGGAGGCGGCCCCTCCGCGCGGC
GGAGCCCCCGGCGAGCAGGAGGAGGAGGACGGCGCAGATGACGAGCGCCCCGGCCGGCAG
GGACCACCGCAGCGTCGCCGCCGCCCCGCCCTTCCTCCCCCCCGGCGC
