Contig Data
morexGenes
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Map Locations of contig_1564183 (3589 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1564183

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12824 4 2216 bp MLOC_12824.2 Available Available LOC_Os02g18660.1, FRAME:-2, EVALUE:9e-83, 13102.m02091 protein expressed protein





CDS Structure of MLOC_12824






Contig Sequence (3589 bp)

>contig_1564183 3589 assembly3_WGSMorex_rbca.fasta
TAGTTTTTTTTTTTAATTTAATGTAACACGGAGGCAACGCGTGGATTATCGATATTTAAT
GTTTTTTTCTCACAGGCAAAAAATGAGTCTGATCAACGTTGGACGCATGAGCCGATCCAT
TTACGAAAGTGGATGTTCGTGTCCGTCTGGCCGATCCAAACGGACAAAAACCGTTGGACG
CATGAGCCGATCCATTTACGGAAGTGGATGTTCGTGTCCGTCTGGCCGATCCAAACGGAC
AAAAAACCGAACGAAATCGCTGTCCGTTTGGGTCAGCCCGTTGGAGTTGCCCTATGAACA
TACGATATTTTTTCTCCCACTTGTAACGCATGGACATATCTGCTAGTAGAACGTCAAAAG
GCTCAACCCAAGCCAATACGACTGATCGTTGGCCTCCAGCCTCTACCACCACCGAAGAAT
TCAGAAGCAACATTACACAGCCAAGAAGACCAACTCAATGAGCAGAAGAAACAGAAATTC
AAGTCATAGTCAGCAGTACCACGCCACATTTTCTAGACATGACACCAACATAGGTACTGG
CATAAGACAGTATGAGTCAGCTGACCACCACCAACCATAAACAAAATAATAGCCGGCCAC
AACAGTAGCTCGTCACCATGTCTCACGCCCATCCATCAGTTCCACGTTGAAGCAACCTTT
TGATACTTCAATCGGTTTTTCTACCCAGCAGCAACATGGCAATCAAAGCGAACAAAACCA
GAAGTTCGATCAGGAACGGAACATCATATATTGCTGTAACATGCAAATACACACTTATTT
CAACAGAAATACAATTTCAGTACAGGGAGTGTGCACAGAAATAAAACAAAGCATGGATGC
ACGTGCACTTCTGGGATCACCATTTGCAAAAAAAAGGGAATATTTACTATTAACCAAATA
CGGTGGGAATATTTTCAAAGTTAGAGGCCAACATGAACAAAAATGCAACAGTTATTCTTT
CTAGGACACTGAAGGGAAAGCCAAAAATATATGATATCCAAGAGATTCAAATTTTCTGAA
CGTATGTACAATTGTCCAAAATGCAGTGCTACTGAAAAAAAACGTTGTCAATACGATAAT
AAATACACTTAACTAATCAACCATTGTCTTATATAACTTTATAAGTTGCTCGAAAATGAG
ACATAAGGTTAAATGTAAGTCATTAAAATGACAGCCATAATACAATAACGGTAATGTTGA
CACCCACAATGCAATAACAGTAACCGACACTAGAATTGGATGAAGATTTACAAGTCAGTA
CTGCAAAAAAAAAAACGGTGTATCCCAATACGGTGGAACCATGTTTGAATAGATGCATAA
TCCATCTCATGTCCCTTGGCCCTTGTTACAGACTTTCAGTTGCCACGAATTCAGTGTGCC
TCACTGCCTGCACAGAATTATACTGGATATATGTCCACCCAAACTTCCAACTCACATGCA
TCCGCCTAATCTTTCTAACCATTTAGGGTGGTTGGAAATTGGTTGCAGATATATAAAGCT
AGACTTGAAGTAAACTAGGCTACTAGAGAAGTAGGATGTTTCACATTGAGTTATATGAGA
ATCTTCATTATATCATCACGATAAAACATAATAACACAGGCATAAGTAGAATGGCATACC
GCATAAATGGGTTGACAACAACAGAAGGGCTTAGTTCAGCAATCCTATAAATATGTTGGT
CACCTCCTTTTTTGTGTCAGCTCGGCGCATCTCCATCCTCAACTCAGATACTCTTTGCTT
CTTGATCTTGGATTCCAAAGCAGATGCCTTCTCATCATTAATGAACTCAAATACTCTCTT
CAGTGTCTCCCCACATGGATGCTGGGCCTGGATCTCCTCCACAAAAGAGGTAAGGTTAGG
GTACAATTTCTGCAATTCATCAAAACCTTTGCGCGTGCCTTTCACGTTAGCATCAGTGTC
CATTTTCTCGTCATGAGTTTCCCCTTCCTTCTTAAACAGATCAAGGGTGACAGCATTTTG
AGTGTCAGCCATATCCTCCTTTAGCGTGGGGCTCTCTGCATCTTCATCCGCTTTCTCTTT
GTCAGACTTTCCACTCTTGCTCCTCACCGAAGTGCCACCATTTTGAGCGGTAGTATCCAC
AGTCTCCTTTGCAGTGCCAGTTTTTGCATCGCCTTCCAATTCCTCCTTGTGGTTTACCCG
CTTTCTACTCTTAGCAGGAGTATCAGCAGTTCTAGCTTTCTTTGATGACCTGCCTTTGCT
ATCTTCGTCTACCTTCTCTTCGGTGGCCTGCCCCTTGTTAAGCTCGGTCGAAGTTCCGAC
ATTTTCATCGACGGCAATGGTGGTGTCCTCCTTCACTGTACCACCCTTTGAATAACCCTC
TGTTTTCTCTTTGCTAGTCTGCCCCTTCTTCTTGCTCTTTGAGGAAGCAGCCTCATTTTG
GGCCATGGTGGCTGCAGCGACCTGCTTTGCATTTTCTCCCCAGACTTGCTCCGAGAGCTT
GAACTTGCGGAGGTCATCATCTTTCTCTGGCAGAGCGCCTGTGCTCACCGCTTTCTCATA
GCGCAGCTTAAGAGTTCGCACTTTCTCATATATTTCCGTCTTGGTGCAGTTCTTCCTTTC
GAGGCTGCCACCAACCGCAGCAATAAGCTCACCAGCGCCCGGACGGGTGCCATTGGCCTT
GACGTGGTGAACAAGAGCCTCCAGGATCTTGAGCTCGTCCTCGGCTGTCCAGCGCCTGAG
GTGACCAGGTTTCTCAGGCTTGCTCCACGGTGTAGTCTTCTCCGGCTGGGCCTTGCGCTT
CTTCTTACCCTCACTGGAAGGAGTGAGCACGGAGGGTGCCTTCTCCGCCGCCCCGGCCTT
AGCCTTCTTGGCCTTGCCGGACGGAGAGGGATCCGCCCCAGCCTTAGCCCTCTTCTTTCC
CTTGCCCTGCGGAGAAGGCTCGTGGTCGTCGGATTCGAGCTCGGAAGCCGCAGCCGCCGG
CGGGTTGGAGGAGGCGATCTGGCGCAGCTCAAAGGCCTCGGCGTCGATCTTCCCCGACTC
GGAGGACTCCTCGTCGCTTCCATCCGACGAATCGGCGTCTGCGTCGTCGGCCGTGGCGGC
GGAAGAGGGGCTGGGGGGATTTTGGGTTGTGGGGGTGGCCTCCGCCGCCCCCTCCTCCTC
CTCCTCCTCGGCGGAGCTGGATTCCTCGGAGGAAGACTCCTCCTCCGGAGGCGGGGGCGG
CGGCGGCGACGGCTCGCGGCGCTTGCGGCCCATCCTCGCCGCTAGGGTTTCGGGAGCAGG
AGCGGCGGAGAGGGTGGCGAGCAGAGGGTGTTAGGTGGAACCGTGGAAAAGAGGAGACGG
CAGCGACGCGGTGGCCGCGCTGTGAATGCGTTGGAGCATCGAGGGCATGAACGGAATTTG
TAGGCCTATGCCACCTTGTTTTCTTTTAAGAAACTAGCAAAATGTCCCGTGTGCGTTGCT
ACGAAAAAAAAACATAATCTTCAACGATGATGTTCACATTATGTTCACATATCATCGTTT
GATTTTGAAATTTTATGCACAAATGCAAGGAAATGTTTTTTCTTTTAAATTTATTCACAA
GTTGAAGCAATCTTTACATTTTCAAAATATATATATCATGGTTGTCAAA