Contig Data
morexGenes
Links



Map Locations of contig_1564175 (3575 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1564175

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12822 2 2123 bp AK251925.1 Available Available None





CDS Structure of MLOC_12822






Contig Sequence (3575 bp)

>contig_1564175 3575 assembly3_WGSMorex_rbca.fasta
TGCGTTCCCTCTAGCCCACAGCCTGAACTTTGATGTAGCCCCTTTGTGTTCTCCCTTTTT
GGGGATTTTTGTACTGCACATGAATAGGCATTAGGCTCGTCTGTGCTGTACAGATTGCTT
CGCGGCTGGGCTGGAGATTGTGAAATGAGCTGATGGTGGCCATGTGTTTCTGCAGGTCTC
TGGCTGCTGCTGCTGCTGACTGCGGTGATGAATTCGAGGCCGATCGTGCTCGTCTTCCTC
CTGCTCGTGCTCATCATATCATCGCAGTTCGAGTGGAAGCAGCAGATCGGCGAGGCCGAG
GCGAGCCCGGATGCTACGCGGCGCAGGCAGCCAGCGCTGGTCGTAAGGGAAGACGCCGTT
AAAGAGAAAGTGAGTGGGCCGCTCGTGGCGTTCTTGTCGTTTGTCTGATTGCACTCGCTC
TAGGTTGATTTTAGCACATGCCCCCGCCATTCTATGTCACGGAAAATTATCTACTATCTT
CTTGGAGGCAACCCCATTTATTGCCATTGTTTGTTGTGCTACCTTGTTTTGTACACGTTG
GGAAAGAACTGGTGCTGGCATATGGTAGCGCTTTTAGAACTCTGAACACACATAGATTGC
AAATTGGAAACTACCACCACAAGTGTTCTCTATGATTACAGATTGAAACCTGGGATGTGT
GACCAACTTACTTCTTTTGGTTGCATTTCATCCTCTCTAGCAGCCAACTTTTCTGTCTGA
CCTTTTCTTCTGATGCTACTATAGCCATAGTTCAAAGAAGCGCTAGGCGTTAATTGTGCG
TTTTGCCACCGCCTTGTGCTTTTCTGATCAAAGCGCATGCTTATGCACACATTAAGCGCA
GTTATGCGCTAGGTGTTTTGCTAGCGCCTAGAGCTTAGATTGGAATATTAAATTGTATGG
CATGACACTAGTAGCTATCTTTAGAATAATTGCGTGTATTTATGTTGGAATGCTCTATAT
TTCCTCTTTTTACTTTCCATTTAATTGCACACTGTAGTTCAGTTTCAAGAAAGTCAGTTT
TGAGTTTAGCGCATCCCCTAAACTTTGACAATCTATGCAAGTATTGCTTAGTGAAGAAGT
TGAGTGACCTGTGGAAGTTTCGTGATCACCTGTCCACTTTCTGATATATTTGGAGCAGAC
AAATTTAGCCCTGTTTCTTTGTCATGATGGCGCTAATTATTACTCCTTCGCAATGCCTAT
CTTTGTGATGGATCTGACGGTAGAACGGGAATAGCATAAGTTTGTTATCTGAAGAAAGAG
CCAAAGGCTTTATTTTTAGAAGGTGTATGCAATGCAAACTTCCTGAAATAATTGATACAT
TATATGCAGCTAGGCTTACTATCATAGTGGTTGCTTTATCATGCAAGAACTTTTAGGGAA
GGATTGCGCTTCTTGCGACAGTTTTTGATAAGCAGGTGCTCAGTACCAGTACCTACGACA
CGCAAGGCGGTTTTCTTGTTGCCATCCCTTTTGTGTGAATTCAGATTAACATTCAACACT
CACAAGTTTATCTATCACCTGCAGATAATACTGGCGCAGGAGAAGAACATCCAACAACTC
ACCGAGCTCATCCAGAGCCTCCAGGTGCAGCTACTGCATTGCCGTGGCAGCAACAACACT
GCTCAGGGTGCCTCCTCGACTCAGTCTTCATCCAGTTACACCGAAGCGGACAGACATCAG
ATAATCGATGACTGATCGCCCATCAGCATGCCCAGGTCGTTTGCATCAGCAGACGGCGAT
CAAGGACATGCTCCTGAATGGATATGGAAGACACCGGGACCACTATGTAGTTAGGGTCCT
GGTCTCCTGGAGTCTAGGGAGCTGTCTTAGTGTACTGATGTGCCTTGCTATTGACAGCAC
TATGACCACCGCCTTCACCCTCGGCTGTATAGGGTTATATTGTAACTGTATCATGTAAAT
TTAGCCCACCTTCCTCATTGGGATTGAGATTGTACTCATACAGATTCCTGCCGCGATCAT
CATCGATTCTTTCCTTCCATCTTCTACGAACATCTGCAGCAGCCTGTATGTGTAGAGCAA
TTTCTCTGCGATGTGGTGGTCTGCAGGAAAGAGGTAAAGCAGGCACTCTACAACCTACAT
GAGCCTTTGCAAGCATGTGTTTTTAGTTACTCTCTCCGTCCCATAATATAAGAACGTTTT
TGACACCACACTAGTGTAGAAAACACACTTATGTTATGGGATGGAGGGAAAGGTGGCATC
ATCAGAATATGTACACATGACGATTGTTCAGAAAAGCATATATATTATCAAAGAATCAAG
GAGAAAAGGCAGCATGAAGAATCAAGCATCGCATGCTCAATGAACAGGGTACGCAAGCCA
CAGAGCACACAAATCAACAGTCACAGCGATGACTGAACTCAATGCAGCTAGTTTTCTGTC
AGGAATCCATCCATGAAACCAAAAACATGTAGAAGAAGAATAAGAATCGAAGATGAATTC
ATGGATGATGATGATGATGATGATGGATTGGATGGACGAACGGACGGATGGCTACTTCTT
GAGGAACTGGAGGCCGTTGGCCTGGGAGTAGCGCTCCATGAAGCGCATGAATCGGTCCCA
GTCCCTGGGGGTGCGCATCACGTACTTGGCCTCCACGGCCGCCGGCTTGCCGTTGACGAA
CTTGGCGCTGACGTCCACGGAGCTCAGCGTGCCCTCCTCGTCGACCATGTAGAATCCGGT
GATGTCGCCCAGCTCCGCCGACGAGTCGAACACCGACGGCTGCTCGAAGGTGAAGATGGC
CACCCCGTTGCTGCCGTCCCGGGACTTGGTCAGCCGCACGTCCGGGATCGTCTGCTCGTC
CGTGCCCTGGATGAACTGGATCGACGGACGCGACAACATCGCCACCGCCACCACTGACGA
TGATGATCGCCGGGAACTGGTCGCCGTTGGGCTCAGCGGTTTGTGCAGCTGCACCGTGAC
GCCGCTGAAGGAGGTGTGCAGTTGGCTCGTCCTCCTCTGGCACCACGAGCCTGAAAATTG
GGAGAGCATGTGTCACATATATACTGAAACTTGTTGGAGATTCATAGTGCACGTTGCTAT
GTTGTACAATTCGGCTTTACAATCTAATAAATAAATTGTTTGGACAGATTCTACGATTAT
GCAGTAGAATCAAAATGATTTGAAATCTTATCACAGGTTTCCGATCCGATTCATAATCGA
TGATTCTGAAACCATTGGCTTGTCTGTGTGGTCGACTAACACTGTCATGCATAACAGAAG
CTGAGTGTCTGCAGAGATAAACTTGCTTTTCTGAGAATTAGACAATATGGCTCTGTTCGT
TTCGATCCTGATTTGGTTTGGAACTCCACGACTTTGCGATCCTACCGCGGGGTTTTGAAC
CGATTACGACTCTGACAGCGTTGGCTCTTGATGTAATGTATACTATCACAACCATGCTCC
CAATGCAGCATCATGCGTAATACTCCCACCGTTCCTAAATATAAGTCTTTAAAGAGGTTT
CATTAATGGATTACATACGAATGTATATAGNNATACTTTAGAGTGTAAATTCACTCATTT
TGTTCCATATGTAGACTCCTAATGAAATATCTTAA