Contig Data
morexGenes
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Map Locations of contig_1564143 (3977 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1564143

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12809 2 2074 bp MLOC_12809.1 Available Available LOC_Os01g10850.1, FRAME:+2, EVALUE:1e-165, 13101.m01171 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_12809






Contig Sequence (3977 bp)

>contig_1564143 3977 assembly3_WGSMorex_rbca.fasta
GTTTCAGTGTGGGGGGGGGGGGATTTTTACCAATAGTTCCCAACATCTCTTGATGACCAA
TGTGAAACAATTGATGGCCGGTCAGCGGCGCACCATCGATGATCGATCATCTGCCGTGGT
CTCGAAGCCATGACAACAATTGTGCAAATCAAGCAACGAGAGCATGCACGCACGCATGCA
TACGACCATGATTTCCGAAGCATGCTTCCAAATCAGTACAACTACAGCCGGTCTGCCCAT
TACCGAGGAGAAGAAGTGCAACCTAGTGGCCATGGGCAAAGCTTCGTTGATACGTAGCGT
GGATATGGTATGGATGGAATGGACGGATTCAGCAATTATTACAGGCTTGTAACCACGAGA
GGGAGGGAAGGCAAACGAACACCGAACAGAACCAGCTTATCTCCCTGCTTATTTCACCGT
CCGATTTACGAGTTAATCATCGACCTAGTGTTCCGATTTAGGAGTACGGGGATGGCCCGG
CCGTTTGTCCGGACGCGTCGCAACTTGCAACGTACTGACTGATTGATGCTCGCTGCTGGT
TGGTGCCACATGCATTGCCATGCACGCGACACTCCTCCGGTGGCCATTGGCGTGTGTCTC
TGCCCGGGTGACTCCATCCATCCATGGGGCTCTGCTCGGTGCGCGTGCGCCCATCCCGGC
CGTGTCTCGACCGCCGTGCTCTCCCCGGCTGGCGCTACCATCCACGGCCGCACACAGCCA
CAGCCCAAACAGTCTTACTGCCTGTCACTTGTCACCTTCCAAACAGTAATAGCGACAAGA
TCCCCTCCTACTACCTATCAGCTGGCTGCCTCCGCCCCATCGGTCCGTGCTAGCTAGCCA
CGCCTTCCGATCCAGCAGCGAACAGCGCACAGGCTGCCGCCGCATCCAACGTTTGATCAG
CGTGCCCATATATACGTGCGCGCGCGCGGCGGGCTCGTGCGTGGCCAGAGCACCGCCTCG
CCAGCGGAGCTCGCTCGAGTACTTAACACTTCACTCTCCCTGCAGCGGAGGATCTTCCCT
TCCTCTTCTTCAGCTGTTGCTTTCTGGAAGTGCCGCGAGGTGATGGGGATGCTCCTGGCG
CGCGTAGCCGTGTCTGTTCTCGCCGTGGCGACGGCCGTTGTTGTCGTCGTCGATGGCCAG
ATGTCGCCGGCGTTCTACGACGCCACGTGCCCGGGGCTGCAGTCCGTCGTGCGCCGCGGC
ATGGCGCAGGCCGTGCAGAAGGAGGCGCGCATGGGCGCGTCCATCCTCCGCCTCTTCTTC
CACGACTGCTTCGTCAATGTACGTTTTGGCTCCGGTCGGTCACAGATTAAATCCTGCCAA
CTGCTGCGTGCTGAGAGAGTGGGTGCGTGCATGCGCAGGGGTGCGACGCCTCCGTCTTGC
TGGACGACACGGCCAACTTCACGGGGGAGAAGAACGCGGGGCCGAACGCCAACTCGCTGC
GCGGCTACGAGGTCATCGATGCCATCAAGGCGCAGGTCGAGGCTTCCTGCAAGGCCACCG
TCTCCTGCGCCGACATCGTCGCGCTCGCCGCCCGCGACGCCGTCAGCCTGGTCGGTACCA
ACCTGCTTCTCTCTCTTTCGTATCCTGGTTGGTGGCAATGGCATTGTTAATGGTGGCCAC
GTGCGTGCGTGCAGCTCGGGGGGCCGAGCTGGACGGTGCAGCTGGGCCGGCGAGACGGGC
GCTCGGCGAACCAGAACGCGGCGAACACCAACCTGCCGCCGCCGGATGCGAGGCTCGCCG
ACCTCCTCACCAGGTTCAGCGACAAGGGCCTGGACGCGCGCGACCTGACCGCGCTGTCCG
GGGCGCACACCGTGGGCTGGGCACGGTGCACCACCTTCCGCGCGCACATCTACAACGACA
CCGGTAACGCGGCCGTGGACGCCGCCTTCGCCACGCAGATACGCGCCAAGGCCTGCCCTT
CCGCCGGCGGTGACGGAAACCTCGCGCCGCTCGAGCTGCGCGCCCCCTCCGCATTCGACA
ACGGCTACTTCCAGGACCTCGTCGCTCGCCGCGTGCTCCTGCGGTCCGACCAGGAGCTCT
ACGGGAGCGGCGCGGGCAACGGCAGCACGGACGCGATCGTGCGAGCATACGCCGCCAACG
CCACGCTCTTCGCGGTAGACTTCGCCGCCGCCATGGTGAGGATGGGCAACCTGGCGCTCA
CCGGGAAGAACGGCGAAGTCCGGCTAAACTGCCGGCGAGTGAACTGAGCTGAATGAGTAG
AATCAGTGAATGGATTCCTGATGTATGCATCGCAAAGGCATAAAGTTATTGACAAAGATA
CAAATGGGCGCTGGTGTTCGAGCACTGGATTTTCTCCCGTTTGGATCGGCGTGAGCAGCT
AATCTCTGACACAAAAATCCTGTAGGCCTTGTTTGGCAGAAAGGGGTTGGGGAGGATTGT
GGAGGGGTTCACAGGATTAGGTGAATCCCTTCTTTCTACCAAATCCTCTCAATTGCCAAA
TCCCTGAACCATGAGATAAGTTTTTCTGAACCGCGTGGGTAAAAAGAAATCAAGGGGATT
AGAGAGGATTGAAGGGATTTGCTCATCACAAACCCTGTCCACCAAATAGACATGCAGGGA
ATCGCGGGGTTTCTGATCCCCTCGGGAATAATCCCCTACAAACCTCCTCAAACCCTGCGC
ACCAAACAAGGCCGTAGGGGCAGGCAAACTTCGGGGCCGACAGTTTGCTCAGTAATGCCA
CGTTAAGTATCGTTGCTTACCAACGGGCAACGGCGACCCTAGAACGGACATACAGTGATA
CAAGAGCCGGTATCTATGTACCTCAAATATCAGTATATATTTCAAGCAGAATTCAAACAC
CATACAAATTCCATGCAAATCGGCTGATTTTTATTTAAAGCGAACCATACATGTTACATT
TTTGACATATTTCATTAAATAAAAACATCCCAAAGTTAACCTAGCCTAAATCTTCAAAGG
TGTCCATCCTCAAGGTCCTTGTTTTCTCAAATGCCTGACTTCCTGGACGATCGTCAGCTC
CAGGTAGCCGCGGTTCGTCGGCGAGTAAGAATAAAACATGGGACAGGAAATGCGCACATA
GGACACATACACCTTCGTCTTCCGTGTCTAGGGATGTAGGCGGGCATCCGCATAAGCCTG
CATAATATAATATTAGTTCAAACTAAGGAAAAGCTGACAAAAAATTTATAACTAACCAAA
GATATTTTAACTTGTAAGCGGGGCTGATCAGATGCCGCTCTACATTGGCGTCTATGATTG
GACATGCACTTGTCGACCTCATTGCCGTAGCGGCCTGACACAAACGTGCAGGCGGTGCGA
ACAAAGCCCATCTGTCGGCGTTCCTGTCTATGATCGCCTTCGTCACATCCACGGGCGACT
GCGGTCCACAGGAGCGCACGTGGCCTCGTAGATCGCTTGCTGGTCGGCAATGAAATTTTG
GTTCTCCTCAACCCTGCCCGTCACGACCTTCTCGCTTGCGAACTCGTCGTAAGTTTAGCC
CTCCACTAGTCGGCGATATGCGAGGAAGGAAGTGACGTAGCGCTCCTCCTCGTGCGCTTG
TTGGAGCGTCGACACCAGCTGCGGTGCTGGTTGCTCCTCCGCCATGACGACGTTGAATTT
TGCCTGCGCCTGCTCCATGGAAAGGCAAGGGCGTGGGTGTAGGCTTGTCATGAGACGCCT
TCTCCAGTGTGGGGTTGTCGTCGGTAACCTCCGGCGAGCTCGCCCTCGGGTGTTTATACC
GATGAGCCCTGGTGTCGGGGCCCGGGCGCTTGCGTTTGGAATCAGGCTCGAGGCTACTTG
CTTCCATGAGTTTGGGAGTTGAGTGTCGACTATGTTGAGAGCAGGAGGCAGCAACCCCAC
ACAATCAAAAACTATGGCCACCTTAGTTCCATCAATAGTCTCTTGGTAAAATATCTCATC
CTAGAATATGAGATCTACATGAGGGTGTTGGGGAACGTTGTTGGGTAACGTAGTATAAAT
TCAAAATTTTCCTACGC