Contig Data
morexGenes
Links



Map Locations of contig_1564083 (3170 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1564083

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12779 2 1947 bp AK366182 Available Available None





CDS Structure of MLOC_12779






Contig Sequence (3170 bp)

>contig_1564083 3170 assembly3_WGSMorex_rbca.fasta
CGCATGACCACAAATCAGAGAAAACCAGGCACCCGACCGGTTCAACTCGTCTTTGTGACT
TAAATGCACCGCAACGCAAGTTCTGTGACGGATTTTTCCAGTTTGCAAGTAGTGCGACTT
AAGTGCACCCGTAGGACAAGTTCTCAGACCGCCAGCGCCTTTTACTCGAAACTATATAAT
GTCCTGAATAAAAAAGAAGGGACATGTATTATCCTCATTCCCATGAATTTGGGTATGTGC
TCATACAACAAATCAAATAATGAACATAACGAATTGTTCTAATCATACTCCAGAGTGACA
GATGGTAAACCCTATCCATAAGGTCTCGCTTAACTTCGCTTCAATATCAATCATGCAACT
GAAACTTGACCATTGTGAGGTCAAGGGTCTCAGTTCTTGCTAGATCCTTCAAAAGAAATG
TGATTAAAGGGAGAAGTTCCCTCGCTTGACTCTGCGTTGTTAGGTAGAAATGAGGCGAGT
GGGCGAGCTCATGTGCGTGTGCTCTAGACAACCAACCGCTCCTCGGTTCCCATTGCTAGC
TTCCTCAATGTGCTTCTTGTCTTCGACATCACTAGGCAGATCAAGTCCCGTCGATATCTT
CCCAGGGAAATCATATGTAGGGGTATCTGATCCAAGCTTACTGCAACGTTGCAAAGCAAA
TCCACATTATAAAAGGCCATCAATTGCAGCGTAATCATTGAAGCAAAACAAGAACTGACC
TTCTGTCGACCAGCACCATCGACCGGAGCTCGCAGTTTGCAAAGCTGGATATAACCAAGG
CAGAATTAGCAACATGCTCTTGTGATGATAAAATTAACCATGGTCTCAATATTTTATGGC
CCTTGCAGAATGTTGTGGGTTGATTGGTAGACAATTACCACAGAAAAGAAAAACTTACCG
CTTGCGCATATCCTCTGCTATGGTTGGATGACACTCTTTACTGTACTTGTTCAAAGTGAA
ATCCAAGAAGCTACTATGGGTGACAATAGCTATCTCATTTTCTTCTCTTGTCCATAACCT
GCAAGCACATTGAGAGATTAGTTTAATTTAATCCGGCTACCAAAATAAAATTACTGCTTG
ACTCAACATGTCATCTAAAATCTGAGGTTTGTCTTTCTCAATACATGCTACACATAAATT
TTCTGCATCTAGGACTTTCTAATGTCAAATAGTCACTCAGTGATAACTCACTGGTAACAG
ATCATTAGGCCTGTATTTTCAAAGAAATTAATGAAAAGAAACCGATCAGTCTTAGAATGG
AAAATTACCAGTCAAGGAACTTCATGCCCCTTGCAGCAACAACGTCAATTGCTTCTCTGA
CATCGGGTTCCCAAAGAACATCTTCATCATTCTCTATCTGTAAAAAGCGCGAGCATACAT
ATATTTAAAAAACTATCGAGACACCGTCTCTGAAACTGAACTCGTGAACTAGCAACGCTA
GGTACTTGCCAAGGAAAAATCAATGGCAGGAAAGAGAGCACGGTATTCTGTTACGCTGCT
CCTCTTATCACAGGGATGAACACCCTGCATTTTAATAAAATAAATTAAAATGAGGCACAA
AATGATGAGTACGTATTTGGTAACAAAATGATTGCTCTGTTTTATTTGTGTTCTTCAGGA
AGGGGATTACCAGGCGCTCCCTGCAGGCCTCGACTGCAAGAAATGGTGGGCAGTTCAAAC
TTGAAATCGCCTGACGTCCACTGTGTCCAGCACCTTCTACCATTAGTAATGGTGATGCAC
TTACTCCATCAGTACAGTTCTCACCACCAAAGACCCCCACTGCAGTTTGCATAGTCCTGT
GAGATTGATTCAAGTGAACATGAAAAGGTTAGAAGACGAAGATCCAGAACACTGAACATA
TGTACAAGAAGGTTAGAAAGTCAAGGAAAACTATACCTCATTAGAGGGGAAACAACAACC
AGCTCAATCTTTTTCGCTAGTCCGCATTCTGTCACATGCTCTCGCAGGCAATCAACCTAC
AAACACATGTAAATCAGCATCCATGGAACTTGAAAATGCCACATGAAAAAGAAAACTTGA
GCCATAACAACATTATTTTGTCAGGGCCAGAAAGGAGAAAAGGAAACAAGAAATCTTACT
TGACTCCAGCCCAAAGGGGTGATGCGAGCATCGACCAGCGCAGGCGACTTGTAGGCGCTA
TGATCCTTGTCGCCTTCCACGTTATGGATACCCTGAGCATGCCTCACCTGCAGTACGTTG
GTTAGAGTTAATCAGATGGAACTCTTTTTGCATCTTTGGTACGTACAGGTTTGATGCTGA
AAACTGAGGTGGTGGTAGTACCAGGTATACGTTTTTGCAGCGGCGCTGAGGATACAGGGC
AGTGCTAGAACTGGCCTCCATTTCTGCCCAACAAAAATCAAACAATCATTACCATGTTAT
ATAATCCACCGAAGGGTTACACAGAAAACAACAGTGGGAAGAGACAGTTGCAGCGCCGAT
TCGTAACTTTCCCGACTGTACTTGATTCTTCACTACGGAAAGGCATATCGATTCGGCAAA
AATGGAACATCCAAACGGCACGGTTTCAGGCAACCAAAGAACGTATGGCAATGACAGGTG
TGGATGATGCTCCCTTGGCTAGAAAGAAACCATGTGCGCAGCACGCGTGTTGCTCTAGTA
TCACCAAGGGGCAGTAGTTGGAATTGGATGGAGAAACCAAAAGTTGTGATTTGCCAAGAG
CACCAAATCGTACGGGTGGAGCAATTTTCTGTGGGATTAAACTACTCCCTCCAGCTCCAG
ATACAAAGTTGTACTAAAACTGGGACAGGTAATATGGGATAGAAGGAGGGAGTAGTAATA
AGCTTGAAAACATGAACCTCCTCTCAATTCTCAAGGGGAGAAAAGAAAGCAGCCCCGTCC
GGATGCAAACAAATGGAACTAGTACTCTGTTTTGACAATGCTACCTACGGTACTTTGCAT
CCAACCATACCCTGAAAGCTGTTCAAGACACTCTGTTTTTTTTGTCCCTTTTGGTGACGG
AGAGGGCCATTTTCAGCGGCGCCATGTGGTCGAGAGTATTAAATATAAGTTTTTAAAAAA
ATACTACGTATTACTCTCTTCGGTCCTTTTTAGTCTGCATATAAGTTTTGTCGGAAGTCA
AAGTATCTCTACTTTGACCAAACTTATAGAAAAAATTATCAACATTCACC