Contig Data
morexGenes
Links



Map Locations of contig_1564053 (4801 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1564053

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12766 10 2379 bp MLOC_12766.3 Available Available LOC_Os02g53780.2, FRAME:-1, EVALUE:2e-93, 13102.m06152 protein expressed protein





CDS Structure of MLOC_12766






Contig Sequence (4801 bp)

>contig_1564053 4801 assembly3_WGSMorex_rbca.fasta
TTGTGATCATCGACGACATCGACAACGTACAACTCCAATATCATCTTCTCTTCTTCAACT
CTTTTCAATTTTCCTTTCAAATCCTCGTTTTCTTTTTCAACTAAATTTAACTTCTCGACA
ATAGAGTCCATTGGAATTTCTGGTTCAACTACCTCCTAGATAAAAATATCTATGTCAACT
TCATGGGCATAATTGTCATAAACACGAAATGCAACAAATAGTAAAAAAGAGAATATACCA
GATACGGATCGTAAACCGAACGAGGACCGATGGGCACGGATATCAAAACCATGGCACTAT
GTATAACAAAAAATCATACAAGTAAGAAAATTATACAAGTAACTATCTAAATCATACAAA
TAAGATAGTTTTTATAAAAAGGATAAGAACAAGGGGCTCACCAAGGTGGTGCCGACGGCG
ATGAGACGGTGCGGGCGATCGACGGTGCGTTGCGAGGGAATATCATCAACACAACCAAAA
GTCTGTACTGATGGAAAGGGCTAGTGCAATTTATGTGAAGTTACTTGGTATGTGGTGATG
ATATTCCCTCGCAACGGCGCCAGAAATCCTTCTTATACTTGTGATATGCGTTGGGTTTTT
CGTGAAGAGGAACGGGTTATCGCAGCATAATATGGGTAAGTATTTACCTCAGTTATCAAA
CCAAGGTTTATCGAACCAATAGGAATATCAACCACGACAGTCTTCAGCGGCTACACACAA
AAAAGAAAATAACTTGCACCCAACATTGGCAAGAGGGTTGTCATTCCCCTTGATATTGTT
ATTTGCAATCAAGTGGGGTGTGTAGATAATTGTAAATTGCAAAATAAAATAAAAACAAGT
AAAGGGAAGCAAGGTATTGAAGGTTTTGTAAATATATGATCAATAAACCCCGAGGTCATA
GTTTTCCCTAATGACATCTCTCATGAAAACAGCATGCACTGGGTAAACAAATTACTATTG
GGCAGTTGATAGAAAAAAAAAGATAGTTATGTGATATTCACGGTAATGATCANNNNNNNN
TAGGCATCACGTCCACAAACAAATAGACCGACTCCTTCCTGTACATATTACTATTATTCC
ACTCATTGACCGCTAGCTAACATGCATCTAGAGTATTAAGTANNNNNNNNNNNNNNNNNN
NNNNNNNNGACATGATGTAGACAAAATAAACTCGTAAACTCAAGCAATTTGAATAAACCC
CATTGTGTTATCCTTAGTAGCAGCAACACAAAAACGCATCTTGTCTCGTTCTGTCACTGG
GATATAAAAATTCGTCAGGTTGAACCTACTACANNNNNNNNNNNNCACCAAAGAAATATC
AATCTAGTTGTCCAATCTATATCAACAGATCAAAGAGAATTATGAAGCTGTCATAATCAT
GCACATAAGAATCATATTAGTGTTCAGAGAAGACTTAAATATTTATCATGAATAATATGA
ACATAAGCCCAGGTAGAACAGTTGTTTGGTTGGCCGCTGGCCCGTCCGGGGTAGTGAATT
TATGTATGAAAGACCGTAACCCGGATGTTCCTTGATTAATACAAGTTTCATACCTGCAAC
AACAACAAAAATGTTGGTTACTTAATGTATCAAGTTTGCATCTTTGTATTCCCCGTGGTC
TGTTGATTGCTTCCCTTCTTAAAATCAACATTCTTTTAGTTTTGACTTTTGAGCAAAATA
TATTTTTAAGCAAAACATACCATATAATTGGAGTATCAGCTAAAAGGGACACTCAGTGTG
TTTCAGTACAAACCAGGAGCATTTTCCCTCAGAAGAATCAAAAGAATCTCATGTGCTTAG
TTTTCCCCAGATGAACCCAGTTCCTCATTCTGCTAAACTTTGTTAAAAAAAATGTTCCGT
TTGATATCTTCCAAGAGTGATATGTCTATTGCAATATACTCCCTCTGTACCTAAATACTT
GTGTTGGAGAAACTAGTACAAGATCCCCCAGCTACAAGTATTGTGGTACAAGAGTGACAT
GACAGCTTATGCGGGTCGACTTTATTTAGAATTTTAGCTCCTGAACCTGAAAGCTCACAG
GCTCATGCTTCTCCACATAGACATACATAGATGATGTGTTTTTTTCAAGGTCAACAGTTC
ACCGCCTTTACTGTCGTAAAAAAAAAAAGTTGACCACCTTCCATTTTGTAATCTGTCAGA
AAATAACACACCACTTTTTACATGCCGAGATGTCACTGCAGAAGCATCAAATAGAAAGGC
TCAAGATCCAACCAAGCCAATGCTACATCCCCCAATACTCCATTAAGGCATTAACCAACT
CTTTTCAGATTTATACACAAACTGTGCATTCACAAGAGCTGCCGCATATGCATATTCCTT
CCTTCTGATGCAAATCAGGCAGCATACTGATCTTGTACTATGTTATAATTTTTAGTGAAA
CTGTTGATGCTCCTGAACTGCCAACAGTCAGGGGTTTCGGGTTTGTAGTTCTAATACCTC
ACATGAGATGATCATCTTTGATCAGTTGTCCTGGGCGAAACCTTCAGCAGCTGAAGAGTC
GTTAACCAGCTAACACACACCACCAGATGAATCTATTCTATTCCTAGAACAGGGGAATCA
GGCGTGTTGCTCCTTATGCAATTGGCCTCGGAATTTCGCAATGCTCTTCCGCAGTTCAAT
GTTTGACAGTCGCTCTGCCTCCAGTGCCCGTTCAAGCTGTTGAGCGCATCCAAAAAATTA
TGATGGGGAAGAGTATGAAAATGCCACAGGTCAAACAATAGCACTTCAATTATCCAGAGT
ACCTTTGCTGCTCGAGAACTCCATTCTCCAAGAATAGCTCTGAGTCTATCATTTTCTTCA
ACATACTGCACCCAGCATGTTCATAATCAAGTAAGAATGCTTTGCAAGCAGGCGTAGAAA
GCACTGCGTTGATCATCACGCTATGGAAGAATGGTATTTGCTAAAACATACCTGATTATT
GCTCAAACGAATACGCTGGATCTCCGAGTCCTTTTCATCAATTAGGCCACGAGCAAGCTG
AAGCTCTGAGTGCACTTGGTTCATCTGAACATTTAATTAGTACGGGATACTTCACGATGG
AAGGTTCACTAACGGTGTTAAAGATGAATGACTCAAGTAAATGGTTCTCATATCAGTATT
CACAGATTTTCTAAATTATAGTATGATTTCAAATTAAAAGACTAGACAATTAACACAAAC
AGTCAACTAGTTTGCACAGTAGACATACATGCAATAAGTTTATGTAAGCATTTCCCTTAA
GTGGCCCGAGACAGGTGATTTCACCTTGGGCACATGCCTTGCAAGCTCATGAAAAATGGC
CTGGCTTAAGATAGTAGAGATTATTACCTCGGCGGAGAGTGCGCGAAGTTCTTGGTCACG
AGATGCTAAAAGATGGACAAGATCAACCTGCCGAATTAGAAAAGGGAATAACTTCAGGCA
ATCCACCACTTCATATAACATCTAAGAAGTTTATTCTCTGATTTTGAGCCTCTGCAAGTG
CCAGTTGAAGAAAACTAATGCAGGGCAGTCAGTGTAGTGCAGACCTGAGGAGTGTTCCCA
ACATCAGTTCTCTGATATTTGCTCAAGCATTCTTGCAAGCGCAGCACCTTTCAAGAAAAG
AAAAAGGAAACGGCTGGTCAACAACCAAAGTTCTAAAAGTGCAACTAATTTAGTATTATA
ATCCGTGTTAATTTGACCAGAAAGGTAATCCAATTTTTCAGTGCAAAGTAGTGATCTGCC
TGAGCAAGGCAGCAAAGAATTAGAAAGGTCCAGCTCATTCCTCCTTTCAGGAAATAGTAT
GAATAAAAGTTCAGCTGCTTATGTTGCATAAAGATATAAATAAAACAATGGCAATCACAG
TTGTTTTCATAGTTGTGTTACATGTTACCTCCTCTAAAAATGTTACATAAGGCAATAAGA
TTTAAAAAACGCACATAGTTGTGTTACATGTTACCTTCTCTAAAACTGTTACAAAGGGTC
TAAGTATACAAACGAGAATAGATTTAGTAAGATGGGTCTTGATTATTCAGCATCACAGTT
GTTTTCATTTTCTACGTACCTCCTCACTCAGGTAATGAATATTCTCCCTTTGGTATTGAA
GTAATGCCATCTGCTGGTCAGAAAGACGGCCATCATAATATCTGGTGGAAAATAAATGCA
TCAGTACGCCTAGCTCTACTAGCAGTACCATGTCCGGTGACATAGTTTTAACTCTTTGAA
GTCGCTTGCTGCTAGACGTGAGTTCAGTAGATAAGTTTGAATTCTTTTTCTGTAGATATG
AGTTAAACAATCCTGTCCGAAACAGTAAACTCACATGCACACACACACCTAAGCCTGCAG
TGGTGCAAACTGTGTGAAGAAGACAGATGTTGTATGTGCAGTTCATAATATCTTTTGTGT
CAGCTGGCTGCCGATGCTGAGTATCGATCAATATTTTGGTTATATCAGTCGATATTTCAA
TCATAACAATCCTTTCAAGCCAAACCAATATGAACCCAATGTCCAATATTTTGAACCTTG
ATGTGCAGAGACAATAGTAACCAGCGAATTTTCAAATATGAAATATAAGATACATATCAA
TTAACATAGAAAAGTCTAGCATATCGGCAGTGCCCTGTTATTACTACTTGGGTACCTTCG
ATCTTCCAAAGTCGTTGTAGATGGTTGAAGTGCAGAATATAATGACCGCAATATATCAGG
CCGCCCATCCAAAGAATTGTACTTATGGATATACCCTGTAAAAGGAACCGTCAGGCATTG
CATCTTAAGACCATCTAATGGTACCAAACATGCATTTCTAAGGGGGGGGGGGGGGGGGGG
G