| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_1563861
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_12680 |
4 |
1826 bp |
MLOC_12680.3 |
Available |
Available |
LOC_Os10g32730.1, FRAME:-2, EVALUE:0.0, 13110.m02864 protein haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed |
CDS Structure of MLOC_12680
Contig Sequence (7331 bp)
>contig_1563861 7331 assembly3_WGSMorex_rbca.fasta
ATGATCGCCGGGGGCGGCGTCGCCTAAGCTGATGCTCCCCTGTTTCCAATCAAAGACGAA
GAGGCGACGTGAGTGGAGCGGTGGTGAATGGGTGGATTGTGTGATGGTCAAGGGGCTAGA
CGCAAAAAAAAGACGGCCACGCCTCCACAGTTCAACACCTAGCCTGGAGGACCGGTCAAC
ACGTGTTCAACCGCGTACGTGCCATAGTGACCGTATTTTCACATCAAATTGCATTCGGTG
ACCTATTAAGCGTATTTCAAAGTTGAATGACTGTATTGTGCTTCCGTTGCAATTACAGTG
GCCGTGGGTGTATTTATCTCATTATATTTTCAGGGTTGCAAATGGCCAGTTGGCTTTGGC
CTTGTGTTGGATGCAGTATGCACGGGCTACTCAATTTCATGCATCGTGGGATAAGTGATT
GCTCACAAGGGGCAGGCAATATGTACATGATCTCATCTGCAATTGCTGCTCAGTTTCAGA
TCGATGCTAACGAGTACAGCACCAAGTAACAGCAGGGAAGAAAGAGATGGCAAGTAAAGC
TTTCCACTCACAACATGCCATCTTCACAATTCTCATTGTATTGTATAATGGGAATCCAAG
TATACACAGTAGAATAGCAATCAACATCCCTGTTTGTGTTTGGGCAATGACCAAACTGGC
CATAACGCAGTGGCACCGCCGCTACTCTTAAAATAGTGACATTGTTTCTGCATCAGAAGA
AATGCCTTTTATCTCCGACGTAGAGAATGTGTGGTGGCCTCTCACTGGGCGCTTCAAGAA
ACTTATATAAACTCTGGCTCTGCCTCGTTCCCGTCAGCAGAAGCGCCCTGTTGCAAGGGG
TTTCTCAAATACGGCGAGTCTTTGTACTTGGCATACTCCGGCAAATCTAGGGCGTTCTCT
GCGATTCTCCCGTCCTCGTGAATCCTTTCTATCAAGCTCTCGAGCGAAGGAAAGTTTGCC
TAAGCATTTCAAAAGTAGTTTCACTATCTAGTCACTGAAAACAGAACCTATTCTTTGCCA
GTATAAATGTCGTTTGGTTCTCAGTTACCTCGGGTCGTATGTACCCAACAATAACAAGGC
GCAGCTCCTCTCCATAGAAGTCCTCATCAAAACCATGAAGCAGCCATGGTTCCTGAAACC
AATGCAACTTAGAGCAAAATAATACAGCTAAACAAGGAACGGCCTGTGTAAAGAGCACTC
ACGATAGTCTTCTCTGTGTTATCAAAGTAAGGGTTCCAGCCAATGCTCATGACCATCTTG
TATATGCCTCGCTTCGAAAGTCCAGCCCACCCGAAGTATACACCTGATGTATGCTCTGAC
AGTATGTCGGAAAAGTTTTCTGCAGCCAAGTTCGCTACAAGACAGGTAAAAAATTATCAG
TGACCAAGAAGAATTGAGTGCACTACTTACTACCAAGAAAATTAAAAGGGGAAACTGGTA
GAGCATATATTTTAGTTACAACAGGATATATTTCACCCAAAATGGGACAAAATTTCCAGA
GTTTCAGGACTGTCCTTTTTTTATCATGTGAAACTAGTTTCCCTGTGACATTTCTATATA
TCTGGTCGACTAATTAAGTTGACGCACGCATATTTAACCCGAGTCATTAAGTAGACCTAC
CAAAGTTGCTTTGTCATATAATTGAAGGGGACAAGTCTAAATATAAACCAAAACCCAGTG
TTCCTAAACAACATCCAATTCGGTTAGGTGCTCACCAACCAGCTTCAAACGATTGATGTA
TCTAAGAAACACACAGCGTCAGCTATTCTAGAGGCATGGGTTTCTCAAAGCAATTTTTCT
AGTAATGCAAAACACAGAACTGATATTTGGAAGTAGGCCAGCTAACTGGGGTAGCATCTG
AAATGGTCAATCAATGAACAAAATGAATAACATAGTACTCCCTCCGTACCAAAATAAGGG
TCACTGATCTAGTACAACTTCATGACAAAACCATTTATAGAAGTGATAGCATGCAAAGTC
AGTGAATTGTTCTAGACACTTAAAACCTTGAAAACATGCTAGTGATATCTTTACTTATAT
AATATTAATATGTCAACCATACCTGTTGGTATTCCTAGTACTTTAGAACCACGGCCGAAT
CCTTTGATCACAGGTCCACCAATAAACCATGGGTCTATTGGTAAGGTACCTTCAATCCCT
GGGCAGAAAATTGATAAACAGTTAAGTTGAATATGTCGATATTGTTCTAAGATAATCATA
AATGGATAGTCCCAAGAGTTAGATCATACAATCATTGAAGGGTGGCAAACCCCATTTTTC
AGGCTTTAAGTCAAGGAGGGAGTTGATAATCTCATCAGCAGAACTGAATTCATCGGTCCT
TTTGGGTACTGAAGGGACAGCAATGACATGCATTCCTGCAGCTTTGCCAGCCGTAACACC
TGGCCTGGCACAATCATTAGTTGGAAATATCAAAGGTAATATGGTTACTAAAACACTGCA
CGCTAAAATATAAGTTTGGGGACCAGTAATGTTAGTGTAGATGTGGTGGATGTAAACATA
ATATCTACAGAAATATATGGAACAGTGATGCATCTGCATTTCTACATAATTCAAAATTCT
GTGCTGTGCACATTGGCATAGCTTTCTAATTAGTATTATTAATTAAATTCATCAAGTTGT
ACAACTGTAAGCTGTTATGGTGTGGAAGATCAATCATATCAGAATTTATCTGTCAAAAAG
ACAGACATTGTTCTTCTTTTAACATAAAGCAAGAATAACATTTTTTTGACATTCATAAAA
GCTATCAGATGGTTACTGAAGCTATGTTTTTATTACTATGTAGCTTTAAGAGAAAAGAAA
ACCAAACTTCCATGCCTATTCAAGCATATCAAAAGAATGAATTTCTGTTCCATCAAAAAG
TGCTAGGTGTTCCACTGAAAACATGTCAATATTACTTAACCAAGGAAGAACTTACACAGA
ATCCTCAATTACTAGGCAATTTGAAGGATCGGCATTCATTCTTTTTGCAGCTTCCAGAAA
TCTTGAATATCACCACACCAGCAGAACATGAGTAACTAAATGAGATCAGTTTGATAAATC
TATAGGGTATCAGTAACGAAAACGTTATATAGCACAATGCCTTACATTTCTGGGGATGGC
TTTCCTAACTCTACTTCATCAGCACCAACAAGTGCAGAGAAATACTCTTTCCATCCTATC
CATCATAAGAGTAAAACTAAGTCATATATCATTCCATCAAATACAAAGAAGAACACGAAA
AAAATCCAGGTATCCCTGAAGCATGGAAAACTGGAAAAGGATACCTTGATGGCACGAGAT
TTTGGACTCAATGTTTGATCTTGAAGAGTTGGAAGCTATAGCAGCTGGCACCCTGCTACT
CTTCAAATGTTTTATTAACCGATTAGCTCCAGGAAGAGCTTTTAAGTTACCCCATCTGCA
ATATGAAATTTAATATGCTACTCATATATCTGAAGGAAGCAAGTGAAAATTCCACAGGCC
AGTTTTTTTCTTCAAGACAAATCATGCACATTACAGCATGAGAAAATTGTAGTAGTTCTA
TCATCATGCCCAATACCAGTCACAACCTTACAACAAGTTACTGTAAGGGAATCTTTACAA
ATGCTTTCATTAGACACGAGACATTTCCTTTTCATTTCTATTAAAGTACTTTCTGCACTA
TACATGAAGTTCACTTTGGTGCTTAAATTGCATCAAAAGAGCGTTGACCTAAGAACTAAA
CTAATTCTGCTGCTGATTTACAGAAATTCTTCTGTAGTGACTTGTCAAACGGACTGTGCA
ATCTAAAAGCATATAGTAGCATAATTTAAGTATGTACTAATAAAAGACAGAGATATTGAA
GTCACCCTACATACATATAAATCACATTGTATTATTATCATATTCATAGTATAACCAACA
TGCAGATGTTAATGTATAACATGTGCACATGCAGATGTTAATGTATAACATGTGCACATG
CAGATGAAAACTCAAGAACATAGGCACACCTCAAAGGCATGATTTAAGACTTCTAGTGGC
AGCATTAGGGAGAGAGATTAACAAACTAGCCTATCAGGGATATTCAGTAATTCATAAGAA
ATTACAGGGAGAAAGTAAATGGGCACAAAAAGATATACATGCACGCACAAAAAAAATGTT
CTTAAAAAGACTGAACTAAATAATCTACGTTATCAAGCGAATGACCTGATGCAGCCACGA
AATGTACAAATTTTTCACTACAGTAACATGGTAATATGCATTTTGTGAAATATACACAAG
TATATAAAGAGGCTGGGTGACATTACTGCTCACTGAACATTGGATTAATCAATGAGAGGA
ACTCTTCGGTGGAGTAAGGGAGGCCGTAATCTTCTAAAACAACAGCTGCAGCTTCATAAG
GCGTCTTTCCAACATACTTGTGAGCATTCTTGCTATCCCACCTTTTCCCATTTTTAACAA
GAAATGGTTTCAGCACTTGGCTTACGATGCAATCTGCCAAATTGGACAACCAAGGTAAGC
AGAAATGAGCACTCAGCATTTATTTAACTTGGAAAGATCAAACAATAGAGGAAATATTTG
GAACTCCCGGTCACCTGTATTTAAAAGGGTACCATCCAAATCAAGAATGACATGGGAAAT
AAGGCGAGTAATGGGCTTCGGTGCTGCCATTTCCAAGGACGGGTGAGCTAAATGCAGCAA
GAGACAAATTATTTGGGAAGCCCAACCTGACATGTAGCAAAAACAATTCAGGCACAAGCA
ATGTTTTTCTGATGATTTAATATGTGTATACAATTACATATTACAACTAAAGTAGGAGTA
AAAAACAGTAAAAGATCCTATCCTTGGTTTTTAAACCTGAGACTATTTTTTTCCAAAGTA
GGACCGCTATTTACAGTAGCATAGAAATTTTACAGGAGTACAAGTGTTTGGCTGAGCTGA
CTTTGGTAATCACCTCCAAACTAGTGAGGCTACCTCGATGGTGTGCCGGGTGTATGAAGG
TCAGTGTGATTTAGTTAATCGCTGGATAAAAACAAATAACCTCATACCTCAATGCCCAAA
GACTGGGAAGGGGCAAACGCAGCAGGAACAAGATTAGGGGAACGGCAACGCGCGTGAGAG
GCGGGAGTCGGGGTGTGGTCGGGGTAGAGGCGTGATTGAGGTGCCTGTGGTGAAGCTAAG
GTACGACGTGGCGGAGGATGAATTGTTTTTTAGGTACGGCGGCCGAGACTGCCAGTGAAA
CTTCCTCGTCGCCGACCACCGTTGCCTGCTTGGCTGCGGCTACCACTCCTACTGCTAGCC
GCTAGCGCTAGGGCGTGCGTCGGTGCCGTCCGCTTGGCCGCCGGCACCACCGCTCCTCCA
AGCTGCCGCTAGCCACTAGGGTTGGCGCATCGCTTGTGGTGTGGTGTGTTCGGCTGTTCC
TGCTCGTAGTTTTCTTTCTTTCTTCGAGGAGTCCTGTTCGTGGCTTGTGAGCATCTCCAA
CAGCAAGTGTATATTTGGATGATGGTCTATAAAGATTATCTCGTATACACGTCCAATTTT
GCATCAGAATATCCATATACACAATGTCTATATTCTCTGTACTATATTTTAATATATCTT
GTAACTGCCAATTCAACTACCATTTCAGTAGTAATTCAAACGATTTATAATTGCAGTGGC
ATCAGCTACTCTTGCTCCTTAACTGGATTTATATTTCTCTAAACAAGTAGCACTAGCAAC
ATCTCTAATCACAAAATCTCGTCATAAACCTTTATCTCCTTTCATTTGCACACAAATGAC
AAGTATGATATGGTAGAGACATTCAGTAGCAGCCAAAAAATTAGTACTCAACTGTAACAA
ATTTCTCTATCTCATTTTTATATATCAACAGGAGCAATGTTCTGTATTAGCAGCAGCAGC
ATATTCAGTAGGAAGCACACACATGTATACTGCTGGACAGTGGCGGACCCAGGAATTAAA
TTAAGGGTGTGCACATTCTAAAAAAAATCTACTCAATCCAAGTGTAACATAATATGGCAA
AAGTATAACATAAATAGCTCTATTCAAATCTCAGAACCATTTAGTTCATAAAATATATCC
CAAATGTGCTCGGTTACAATACAAAAGGGCTTACATGAAAGAAACAGAAGTAGAAAATTA
CAAACTAGGTAACTCTACGTCGTTGGATTGCCATGAAAACATAACTATGTCATCTTCACT
TACTTCCATGAACACATCCCGCTCAATGAATGTCACCAAATAATTATTCAAGCAATCATC
ACCCATACTAGTCCTCAATTTATTTTTTACTAGATTCATTATAGAAAATACCTTTTAACA
CTCGCCGTTGCCACAAGTAAAATCAATATCAATTTGATGAGTAAGTAGACCAAATCATAA
AGATCATGCTTCTTTGTTGCAACAAACAAAATAGAGAGCTCACCAATATTAATTGCATTT
CTAAACCTATCATCTTGTCTCATATCATCAATAAAAGTAGCAAGTTGAAATTCTAGCCTT
ATCAAATCCGTGCTTGATATATCCATGGGATAGAATTCAGCAAGTCTTATTACCTTGAGT
GCATCATGGCTTTGAATATAATTGTTTGGTGACATTCATTGAGCAAGATGTGTTCATGAA
AGTAAGTGAAGATGACATAGTTGACGCTTTCATGGCAATACAACAACGTAGAGCTACTTA
GTGTTGTAATTTTTCTAATTCTGTTTTTTCATATAAGCCTTTTGTATTGTAACCGAGCAC
ATTTGGAATATATTTTATGAATTAAATGATTGTGAGATTTGAATTGAGTTATTTATGTTA
TTCTTTTGGCATATTTTATTACACTTGGATTAAGTAGGAAAAAAATTAGAGTGTGCACAC
CCTTCATTTCATTCATGGGTCCGCCACTGCTTCAGTTCTACAATTAAAATATAATGTCAG
CAAGACTACAATAACAAAAGAGATCCAGGCATCCAGCTGCTCTGTGTTTAAACAATTAAA
CTCACCCTGTCACCCACGAGGCCACGACTAGCAGCGTCGGAGCGGGGAAGGACCGGAGCC
CGGAGGAAACCGCGGCGGCTGGGCGGGCAGCGCCGGAACGGGGGAGGACCGGACTCACCG
GAGGAGACCACGGCGGGCGGCGGCTGGCCCTGGCCCTGGCCGGGCAGCGACGGAGCGAGG
GAGCCGGGGTGGACCGGAGGACGGGAGGAGCGGGGGAGCCGGGAACGAGACCTGAGCGGC
GGCGGCGGCGACCGCGCGCGAGCGCCAAGAAGCGGCGGCGGCCGGGCGCGAGCGGGGGGG
GGGGGGGGGGCACCCACAACTCACTCGAGACCCGCCACTTGTGAAGACGCGTTCTCGCGC
GCCTGGGCGTG
