Contig Data
morexGenes
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Map Locations of contig_1563724 (4784 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1563724

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12615 1 1749 bp MLOC_12615.1 Available Available LOC_Os08g33720.1, FRAME:-3, EVALUE:0.0, 13108.m03518 protein lactate/malate dehydrogenase, putative, expressed





CDS Structure of MLOC_12615






Contig Sequence (4784 bp)

>contig_1563724 4784 assembly3_WGSMorex_rbca.fasta
AATGCTAACATAGTAGAATCATATAATCATCCCTCAACATGCGACAAAGAATCACTCCAA
AGTTTATATCTAGTAGAGAACATAAGATCAAATTGTTTTAGATAGTAAAACTACCTCAAA
GTTATTATTTCTGATCAATCCATTGAGCTATTCCGGTGTTTCAAGCCACGAAGTCATGGG
CTCCATTCTTGTGTGATTTGCATGAACCCAAACACTGCTAGGAGCTCAAGATACTGGGTT
TGACTAGTAGAAAGGGGCGCACCTAAAATGTGGAAAAGGAGCTGATCAGGACAGCACAAA
ATGCATATCCTTTTACATTTACCTTTTTTTTTTGGAGCAGAAACCCAAAAACATCAAATA
ACTCCCCCCCTACTTTCTTCTTTAATCCTTGCACGTTGCAGCTAGCAAAAGAACAATAGG
AACAAAACAACACAGCCAAAATTCTTTAGAGCAACTCTAGCCCGCAAACCAGGCCATCCG
GTAAAATAACCGTCGATTTACGGGACAGAGGCAAATTTGTTGGCCGGAACAGATCCCGCA
TATTCATCCATTCGTTTTTTCTCCGAGGATCCTCCAAACCGTGACCCACTTCCTCCGTAT
TTATGGGAGGAGCATCTGTTTTTGCCGGTTCCCCATTCCTTGGCACGGACCTCCTTTCCG
TTTGCTTTCGTTCCCGCCTCCATTCTCCATCGCCGTCACCGCTCCTCTTGAATCATCCGA
CGATGACAACAAGGACAAACTCCAATCCATTTAAAAAAATGCACGCTCGGTGGCGGCATT
TCTCGAGACCTACCGGAACACACCACCAACTCAAGCATGATCTTATTAAGTATCGTTGGC
AACTTCTATGGGGGATAGATTCCCATTTTTATTAATTTGTATTTGTGTCATTCGAACAAT
TTGGCGTTGTAATAATAATTCGAATTCGAACATTTTTTAGTAACGAGGAAGATTGTTGTA
CCGTGAATTGCTTTTTGAACAGTTTACATCCATATGTTTAATTTATATACGACTGCCGGA
GGACTCGCGGTACCGCAAAAAAGTTTTAGAGGAGCACGTAAACGATTTCTGCGGGACACG
GGTTTCCCAGATCTACTAGAGTTGCCCATATATACCATTAATGGAGCGATCATGTATGAC
GCAGAAATCAAAACAGAATTAACAGAAAAGACGCGGGACACGGGTTTCCCAGATCTACTA
GAGTTGCTCTTATATACCATTAATGGAGCGATCATGTATGACGCAGAAATCAAAACAGAA
TTAACAGAAAAGAACATAGGGTGGATAGCGAAGAACCGAATAAAAAGGTGAGAACTTCCT
GTCCCTGCCTTCTGAGAGCAACCAGGCTTTTATCCCAAACTACACTGAAATACTTATGTT
ATTAATTCCCCGAGTATGTGATGCAAACACATGGAACGTATCAGGAGATAAATTCCCCTG
ATTATATTCAGAATGCAGCAATTGCCTCCTGATATGGATGAACAATTTATGCTTATGCAA
AACATGATGGAAGTTGTATAATACTCGGACAATCAGATCCTGGATCTGTACAAAGGACGA
TGGTATTGCACGAAAATCTTGCACAAAGTAGTGTTCATCCCACTGGCTCATCTTACAACA
GTCATTAGTAACCTATGACGCCATTCAATATGATGCCACGAGCAGGGGCAGGTATAGATG
GTATGCTTTGGTATTGATCAAAGATGTGCTTTATTACTATTCCACAGTTCATCAACTTCA
GAAGCTACAAGAACAGTAGATGGAATAAGGACCAAAATTTATGTGTCAAACAAAACAAAG
GACCCAGAACAGGGTGCAAGTTTGGGGCTACACGCCCTCATGTAAACTGGAATCATAACA
AACTGACCAACAATTGAGAAATATAGCTGCTCCAGGGCATACTGCTACATGTCAACACTC
TAGGCTGCAAAACTAGAAGACAAGAAGAATCATTTCGCCTTCTCTTCGTATGGAATTGTC
GTACTCCTCACTTCAAACAGACGCCGCGGCTCCCTGCTGTTTGTGCGCAAACTCAATGCC
CTTCTCGATGCTGGCCTTCAGCTCAGGCTTCAATGCCTCGAGTGCATTGGCCTCATACTC
GGTCAGTCCCTCCAGGTCGGAAGAAATGATGGACTCAACGCCATTCTTCCCAAGCTTAAC
TCTGGAAGCAAAGAATGGCAACTCAGTTAACTCAGACTGAACATATGTGCACTCGTAAAC
ATCTGGATCACCAGCCAGTGCGCGGAGTGAAGACTCGACAAATCTGGCAGCGGCATAAGC
CATGGACAGGGTAGCAGATCCAGCGCCCGCTTTCGCCTCCACCACCTCTGTCCCGGCGTT
CTGTATCCTCTTCGTCAGCTCTTCAGTTTCCTCGTCCGTGAAGGTGACAGATGGCCTGGT
CTTCGACAACAAAGGCAGGATTGTAATTCCAGCATGACCACCAACAACTGGGACATCAAC
GTCAATGAGCTTGAGGCCCTTCTTCTGCGCTACAAATGTGTTAGCTCTGACAACATCTAG
GGTGGAAACTCCGAAAAGCTTCTTGGGGTTGTATACACCCTTCTGTTTCAGAATTTCAGC
AGCAATCGGCACTGTGGAGTTGACTGGGTTGCTGATAATATGGATGAAGGCCTCAGGGCA
ATTGTCAGCAACAGCCTCTATAAGTGACTTGACAATGCCGGCGTTGATGTTGAAAAGGTC
ATCACGGGTCATCCCTGGCTTTCTTGGGACACCGGCGGGGATGACAACAACATCCACACC
TTTCAGGCAGCTGGCCAATTCCGCGGGGCCAGTGAAGTCCATAACCTGGGAAGGCGTGTT
GCAGTGGCTGAGATCAGCGGCGACTCCCTTGACATTTGCAATATCGTACAGGCGCAGTTC
TGAGACCAAAGGAGACATCTTGATCAACAGGCCCAATGGTTGGCCGATGCCCCCAGCAGC
ACCAAGTACCGCCACTTTGTAAGATGCCTCCGGTAGTATCCGAGCCACCGGCTTTGCCTT
TGGCGCAAACCTTGTGGTTACAGATGCCCGAAGAGACGCCGTCTTGCCCAGGAATGAGGA
CCCCAATCCGAAGCTAATTGATGAGGATGCCTTTGTGCCACTGATGCCATGATTCTTTGG
CTTTGAAACCAGAGCGGCCTGAGCGCCAAGTGAACTGATGGTAGCAGATGATGATGCCAT
GTCCAACTGTAGGAACAGAATTATATCAGTTTCGCAGAAACATAAAAAATCTCTTGCAAG
CATCGATACAACGGGCTGGTGACACACTTCGGGGGCACACAACTGATCCAGATCTTGGAC
ACTAATACACGATCCAGGGGCGGATCTAGTAGTTTCTTGTTTGCAGGGCGTGCCCGCAGA
GATTGTGAAGGTCCCTCCCTAACCTAGTGGGATTGAAATTAACAACAAAGAGAAGTGATG
CTGCGCTGGATGAAAACAACCTAGCTGCTGCTCGTACCTCCAAGGAAGGAAGGAGACCCA
GGTGGCCGGAGACGGGCTGGGTGGAGGCGGCAGCAGGATGTGCCGGGGGGCGAGGAAGAA
GGGAAACGGCGGTGCGCGTCCCCGAGAGGCGGGATCGAGGCGGCGGCGGTGACGCTGAGG
TATGGCACGGCACGGAATGGGCCACCAACCGCTGGCCGATCCCTAGCCTTGGTTGCATCG
AACTGGTTTTGACCGCACGATGTGAGTTGTTTCCAGCGTCAGAGTCCAAATAATGAACAT
TTGCATGAAAAAAATCGTATAAAATTCAAATGACAAAATTTAAAATTTTAAAAAAAATCT
GAAAACACAAAGATTTGAAAAAACAGAGGATGCACTTCTTGCATAAAAAAAGAATGCTCA
CAGTATTACGTCTCGTAAGTCATACATAGCTCTGACGAGCCATTTTCTTACTCGTGGTGC
ATCTTACTTAATACGGTTTTGCTATTTTTCAGGTACCTAAGTTTTTATGTTTCGCCGGTC
ACTTTTTTCTTCATCCTTCATTCTTTCCCATCTTGTCAGAGAAAAACACCCCACTGTCCA
TCTTAGGGGATGGTCGCGATCGGCAAGGGCAAGCAACGACGGTGGGAGGAGATTGAGGGG
AGGGTTAGGCGGTGCGCGGTAGCGCCCGCACCCGCTGGGCGCGCGGGGTGGAGGTCAACG
GTTGCAAGAGAAGTATGGACCAGATCATGGTTGAGAGGAGGAAGACAGTTGGGACGAGGA
AGATGATGTGTGAGTTGTTGGATGTGATCGATGCCAAAAATTTCTTTTAGGTATCTAACA
TTTAAATGTTCCTTCAGGTAGGGTCAATTTTTTAGGTGGCTTAATAAAACAAGTTGGTCC
CTAAATTTGTTAGGACTTCTAAATACTTAATAATTAGTACATAAGCCTCATAGAATGAGA
TAGGTCCGTTTATGAAAAAAACTGAGAAGGAGACGACTAATTTTTTGGGCCGCCAAATGA
ACTAATCTTTAATACTCCCTCCGTCACAGTTTAGAAGGCATGCACGTGTACCTAGATCGT
TAATTTGGCTTATATAAAACTAGCAAAAGAGCCCGTGCATTACAACGGAAGAGAAAATAA
CACACACTCTAAACGTAATATATTTTCACATGGCATTACATTTGTGTTACCGACGATGGC
TTTAGTGCTCTCATAATGAAAACACGTTTGAATGTACAGTCACTCAGAGTAAGATGAAAA
ATATATTGTTTCTCCCCACAAGGTTTTTCAAAGGTGAGCATGTGTGGTTAACGATATTTT
CTTTCCTTTCAATTTGGTTTTAATTTAATGGATGTTTATTGCAA