Contig Data
morexGenes
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Map Locations of contig_1563617 (3669 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1563617

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12573 5 2335 bp MLOC_12573.3 Available Available LOC_Os04g36740.1, FRAME:-3, EVALUE:7e-40, 13104.m03553 protein potassium channel SKOR, putative, expressed
MLOC_12572 1 714 bp MLOC_12572.1 Available Available None





CDS Structure of MLOC_12573






CDS Structure of MLOC_12572






Contig Sequence (3669 bp)

>contig_1563617 3669 assembly3_WGSMorex_rbca.fasta
GCCAAGTGGTCATCAACTAGATCTGCCGGAATACCGTATGCCAGCATACGCAAAGCGGCG
GTCACCTTTTGGAAGGTGCTATGCCCGAGTTCTCCGGCGGCATTCCTCCTTTGCTGAAAA
AACCGATCATTCCTCGCCAGTTTCTCCGCAATGTGTTTGAACAACTCGATGCTCATCCTA
AAACGGCGTCGAAAGTAGGACTTGGGGTATGTGGGATTCTCCACGAAATAGTTCCTCATC
TATCTGTTGTGGGCATCGATCCTTTCCCTACACAATTTCTGATGACCAAAAACCGAACCA
CCATGCTTCGGCTTTTTATTGATGTGGATAACTAGGAACATTGCGAATATATACCTTGCA
AGTGTTTTGTCAAACACCTTGTGGGCGCGAAGCTGAAACGGCCATCGGGCGCTGTTCGTC
GGAGGAACGGTGTGCTCGAGGGGCGGCGGCGAGGAGATAAGGTAGAAGAAGCAGGGGCGG
CCACCGGGAGAAGCAGGGGAAGCGGCGGCGTGCTGGGGAGAGACGGGGGAAGCGCCGACG
GCAGGTACGGGCGGAGGCGCCAGCACCAGGAGGTTTTAGATCCGGCGGTTGATGAGATTC
GCGCGCACGATTTGCTTGTCCAGCACGCTGGAGCGGGCGCACCAAATAAGCCGCTCGCAA
TGCAGCTTTTTCCAGCGTGCTGGCTCCTGTTTACCGCGCACGGAATTATAGCGCGGCTTT
TGGAGCGCTACTTTCAGCAGGGCGCGTGCTATATAGCCTTTTTTTTCAGCTCGCGGCTTA
TTTAGCGCTCTTGTTTAGCGCATCTGTTGGAGATGCTCTTAAGCATTTCTTAATGTCTAG
TGATGTTCTAACTTCAATCAGTGAATGCTTCATCGTTTACATTTTCAACTGTATTTATCG
CCTAAAGTATCTTCTAGATGTCATGATGGTTGGATAATTTTGCAACTGTTTCACATTTTT
TATGGTGCATAGATTGCAGTGTTGTCATTATCATTTTCAGCCATTCATGTTTTTTCTTCG
GCAAAAATGGGCTAGATGTAATGTGTTTTTCAAACTTGGTATTCTTTGGCTAAGATGGGC
AATAATACTCCTGCTTGTTCTTGTCTAAGAACCGAACTTGGAGGACCAAATTGCTTTTCA
CTTCAACTCATACTGACAGATTTGTGCAACTTCTTGAGATAAACCATCATACCTACTTCA
TCAACTGCTGCTGTCTTCTAAAGTTCAAATGATAGTGCTGGGTCCTGAACCTATTTGGCA
TGGTTCTCCTTTACGTTCTTGCTTCTGAACATAGGTTGTTTTGTGATGCATGCCATTTCT
ATGCCAGCCTAGATAGGTGCATACGGAGTACGGTGTTTAGTTTGATATGATGCAATGACT
GTTATCATGGAGTTTGATAATGGTGTTTAAGTGGCACTTGTACTTTGGTTGCAGGGAACA
ACTCTTCAAGTTGATCAATCGTCTTCCCACTGTCTATGAAGCTGTGAAAGGAAGCTATGA
GAGGCAAGCACAGACCCCCAACAGCAGCAGGAAAAATAAGTCCAGCTCTCAGGTAAACAT
ACGCTGACCACACGGCATTCCTTATTTGCTGTCCATATCAATACATGCTTTATCACTCAT
TCCGCGTCCCATTCCAGCCACCAAACCAAATCACTTCTAACTGCAAGCCGGTGACACCGG
CCCTGCCGATGCTCAAGCAAGAGAACTACGCCGATTTTAACAGCTGGGCGGTAACGGCGA
ACTGGCCGACGATGCTTAAGGAAGAGGATGATGGTGGCAAGGAGGGTGGAGGCGGCGAGG
ATCAAGCCATGAGTAAGTGTGCCGGTTGCGAGGAGATCTACAGTGCTAACGACGGGCACC
TATGGATTGGCTGCGACCACTGTCAGAGGTGGTTCCACGGCAAGTGTGTCAGGGTGACTA
CTGAGATGGCGGACCGAATCGAGAATTACATGTGCCCTAGCTGCAGTTACAAAGCAAGGA
TGAAACCTTCTGACTCAGCGGTGCCGATGAAAGCTTTTGACTCATGATGGTGGTGACTGG
TGATGCTTGAATCATGGGAAATTTCTTATTTCCTGACGATACTGTTTGCTCCGTTGTTGC
ATTAGTTTGGTGATGACTTGTTAGGATTTTGGCTGGTGATGGGAACATGAGGTGGATTTC
TACAGGCATCTGAATGTGGTGTTCCTTTTTTGAATTTTGACACAGTTTCAAGACAAAGTC
ATCCGAGCGGACATAGTCTAGCTACTTAGGTAGCCATCTCATATGTTGGCAGTATAAGCC
GCTGTTGATGGACCGTTGAGCGTGGAAACCTGCCTGGAAACCCAGGTCTAGAGTAATGAA
ATGATTGGTCAGTGAATTGAAATGCCATCCGTTTGCTTTCTCTGCCATTGTTACTCTCAC
AACCTACTTCTCTTTGAAATGAATCCGTGATAGATGCTCTCGTTGCCCCCAGAAAGAATA
TCGCATTACCAATAATAATAGTTCCTACCCATAGCCTACATGAGCTACTACAGTCTACTG
ATGTCCTCCCAACCAAATGGATTGATGAACCTAATCACTGATTGGCTGCAGCAGCAGCAG
CAGCAGCAGCTCTAGCATGCTCCAGGATCCTCACCAGCGGCTTGCAGCCGCACCGTCGTG
CTTCGTCGAGTGGGGTGTTGCCCCACCTGTCCGTAGCCGCAAGGTCAGCCCCGAACTCCA
CCAGCATCCCGGCGACGAGGTGCAGGCCCTCGCTAGCGGCGACGTGGAGCGGCGTCCTCC
GGTCGTAGTTCCTGCAGTTGGGGTCGATGCCGAAGCTGAGCAGCCTCCTCAGCAGGTCGA
TCTTGCCCTGGGCGACCACCCTGCACAGGTACCCTCCTGCGTCCTCCAGGTTCAGCGCCG
CGCCGTGCGCCACCAGGACCGAGATGATCCTCTCGTGCCCTGATTTCACCGCTTGCAGCA
GCGGCGACTTCCCAGACTTATCTGCATTTTTAAGATGTGTGTGTGTGTGTGGTAGTGATC
TGAACTGTTTCTTCTTAAAATGGAAAAAAGGAAATCGTACCTATGCTGTTGACGTTTGCT
CCTCGCTTGATGAGGAACCTGACGATGTCTTCGTATCCTCTTGATGCTGCCACATGCTGC
AAGGCAAAGGTGTGGGAAAAGTTGAAGAGTTGTTAGTGTGTAAATAGAATCTTGACGACT
GATGATTTTTGCAGTGAACATTTACTAGTTAGTGTGTGGAACTCCTGTAATCATTTGGCT
GACGATTCATCTGCAAGGGTTCACGTACCAAGGAGGTCCTCCCGTCGTAATCCGGTTTAC
TCGGATCTGCTCCTGCACCGATCAAGCCTTTCAACCGAAGCAAGTCTCCATGGTAGGCAG
CATTGTTGACTCCAAGGACAAGGTCAGCTTCTTGCTTGGCTATCAGGTATGTGATATCTG
ATTCCAGTTGCTTCCCCTTTGACTCTGTTTGTTTCCCCTGCAGAAGAAATGCTTCAGTAC
CGCTATTATTATTATTATTTTGCGTCGAAGGGCTAGCATTTACTACTCCCTCCGTTCCTA
AANNTAAGACCTTTTAGAGATTTCAATATAGACTAGATACAAAGCAAAATGAGTGAATCT
ACATTCTAAAATATGACTACATATATCCGTATGTAGTTTATAGTAAAATTCTAAAAGGTC
TTATATTTA