Contig Data
morexGenes
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Map Locations of contig_1563453 (6368 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1563453

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12514 4 1407 bp MLOC_12514.1 Available Available LOC_Os11g31770.1, FRAME:-3, EVALUE:3e-71, 13111.m03085 protein expressed protein





CDS Structure of MLOC_12514






Contig Sequence (6368 bp)

>contig_1563453 6368 assembly3_WGSMorex_rbca.fasta
CCGTTACTAGCTCAGCCGCCACACACAAAAAACACAGCTGCTGGAGGTACTCCTCTCTCC
CTCCCGTACTCCTCTCTCCCTCCCGTTCCTACATTATGTATGACTCAAGAGGCCTCTACA
TGGACACAAAGGAGGGCTACCAACAATTTTTAATAAATTGCGAAAGTCAAGACTTGAACT
CAAGACCTTAACTTCGGATACCATGTTAACCTTCATGCATAGCCAATGCAACCAAAAGTC
CGAACTGATGGAAAGGGCTAATACAATTCACATATACTGTAACAGCAGCCAGCGACATTC
CTGAATTCACGACTTATTTTTTAGATGTTCATGATCCAGTTTACTGCTCGTGTCTCTGTT
TTCTAGTGGAAGAATCTCAGATTTATCTAGATACTGGTTGGAGGATTTGGACTGCCTCCC
CAATGATATGATGTTTGTATGAACCCTAATTCTATTATTTAAATACTGGTTGGAGGCTTT
GAACTGCATTCTGAATTATATGATGTTCGTATGAACCCTAATTCTGTATTTCTGTGGGTT
TAAAGTTTTGGCATATTAAGACGCAGCAAGATTAGTATAACGATATACTCTGGATCTGCC
AATCCTGCTTAATATGTAGTTATGAGAACAAAGCAAACAAATGACAAAAAAAAAGTTGGG
TGGTGTGGCATGAAGCGGAGTCAGGTCGCTAATGGTGGCAAGCCAACAACAATGAGGCAG
TTTTGGATATGTGAAGCAGTGGAGAAGAGATCAAGGGAGGGCAGAGCTAAAGATAGGAGT
GGCTGCAACGTGGGAACAGGTTCATTATGTGGCAGCTTATGCGGTACAGTTATACTCCCT
CCGTTTCTAAATACAAGTCTTTTTAGAGGTTCCACTAGAAGACTACATACGGATGTATAT
AAACATATTTTAAAGTGTAGATTCATTCATTTTGTTCCGTATGTGATCTCCTAGTGAAAT
CTCTTGTACTGTCCCAAAATAAATGTCTCAACTTTATACTAGCTCTAGTATAAAGTTGTA
CTAAACTTGAGACACTTATTTTGGGACGGAGGGAGCATTTAGGAATGGAGGGGTTTCATA
CAACAAATTTTCCAGTACAGTGCATGAGGATTCAAAAAACACTCACCTCCTCAAGAGGTT
GTCTAAGCATGTTGTAGTATCCATGTTCATAATGCCTTGTGTCCCTCCAAAACTGAAGAA
GCAAACCAAATAGTGAACACAACAACACAATAGTCCCAAAGTTACAGCAAGATATATATA
CTTCAACATACATGCTCAAGATTTCCCTTCCACACCTTGTTTGCATGATCAACCTGTCAA
AAGTTGCCGATGAATGTATATTTAACTGAAGGAAAATTACCATGAACAAATGAGTTATAA
GTTGACCTTTAGGAGGAGGTCTGCCATTTGAACAGTGTCATGACATGTATCATCTTTTCT
TGGTAAGAATTTTTGAAGATCCTGATATTCGAGAAAAAGAATCGAGCCTAATCAACCATG
GCATATGAGACAATTTAGATAGCAAAAGAAGTATACCATTATTCCTTGGATTGCATAGCA
TCCATCAAAGCAATTCTCAGTTAAATCATTAAATTTCTCCACCAATTTCGTAAACGATTC
CTTAGCCTTCAAAGGAAAAAAACATGGTCACTATGAAATATGGAATTAAATATAACAGTT
ATGAATAAGAGAAGTACCCAATCAATAGAAGAATCATCAGTGCTGAAAAAGCCTTCTTCA
TCCAGCAGATCCATCAAACTTGCAAGTTGATCTTTTACCTGGAAGTTTCCAATGTGAATA
CATGGTTGAAATGAGCATAATCACAAGAGATCAATGTTAATCCATAGTTCAATTGAGGAT
TTTGCACCAAAACAAATTATTGGATAGTCAAGATATTCAAAATTAGTACGGAAATCTTGT
CTTGGGAAACAAAACAAACAGGAAATTCAGCATGATGTGCAAAGTCTGAAGTTTTTTTAT
CCTAGAAGAATTGCATTAAATTATTATTGAGAAGCAGAGCCCTCCATGGCAAAGGACAAG
CATCGCCAGGGAGAGAAGACTACACCAAACCTCGCTGAAAAGTTAAGTTGAAAATGCGGA
ACAGGTTTCCATACCTTATCATTAAGAAGGAGATCTCTCAACTTTTGAGTGTAAGAGTTC
ATTTCGTGTCCCCGCTTAACAATTTTGGCCTTTCGCTATAATAAAAGAGTAAAAGTGTGT
AGGAGAATAATTTGTAACATAAATCATCAAAAACAGAAGTAGAAGAGTGTAAAATCGATC
AAGGAATTCATGCGAATTAACAAGTACCTCAAAGGACATTTTGGCAAGATCGGCATCCAG
TTCTGCAAACTGAGCATCCTCATCATCTCTACGAGCACTTTCCTGAAAAAAGTGAGCATA
CAAACAATGCATAAAGGAAATAACAGATAGATGTGTGGAGCTATACAGTGGAACGTTTCC
AAGAACAGAAAATGATGTTCTACCATGAAAGAATGGAAGTCAATAGCATGATCCCATGTG
CATGTAGCCAAATAATTATCGAACTCTTCATGCAGACGTACTTGTTTTTTAGCTGTATAA
TACTGGAAAAAAGGACCTCACAAGTTAGTACAGACTAGAAAGTGACCAAGTTAAAAGAGC
TAAAGCACCAACAAGTCAAAATTAGTAGTCCTGAGATGGTAACAACAATATAGGTACAGA
ATATAAGGCTGAATAAAAGAATATATAGATTACCATTTTTGAAACTATAGGTTTCCATTG
AGTTGTATTTTAAAGGGACAAATGATAGGCTAGAGAATGCAGGAGTAGGTCGAAAAGCAA
GAACACATTATTTTTGCAACTGAATTTCAAGAGAATTATACTCCATATGACACCCTGGCC
TTATTTAGAGTGGGCGAGTGGCTGTTGAATCCATTATCGACAATGGTGAGACGACCAAGT
TCTGGTCTAACTGCTGGTTGCAAGGTAGAACAGTGGCGGAGTTGGCTCCTAATTTGTTCT
CTTTAATTCCCAAATGAGACATTAATCGGTGACGCTGGCTCAAGCTCATACCAACCAAAG
ATGGGTGGCTGACATTAAGGGAGCACTAATTGTGCAAGTCATTGTCGAATATCTTCAAAT
ATGGGAATTGGTTGACAACCTTGTCTTACACCATGATGTGCCGAATCAGCACAAACGGTG
CCTTAACTCAATCAGGCTCATATACCAGTAAGTCAGCCTATGATTCTTGCTCTCTGGGAT
CCACATCGAGTTTGCGCCCTGGAAAAGGATCTGGAAATCTTGGGCTCTGTTGCTTCGATT
TTTCATCTGGTTGGCTGTCAAGAAACGCTGCTGGGCAGCTGATTGGTTATCTAAGTGTGG
GCTGCCGCACTCTCCTGCTTAACCTTTGTGTGATCAGGAAGAAGAAGAAATTTCAGCACA
TCCTGGTTTCTTGTCTGTTCTCATGGCAAGTCTGGATGCTGGTCCTCCAAGAGTTGGTAT
GTCAGCTACTGCCCCCTAACCTGGCGCAACTTCTTTCTCCAGGTGGTTGTGCGGTGTTAT
CAAGAGGGCTCCTAAAGAGATGAGGAAAGGTCTCAAGTCCCTCATCATTCTGGTTGCCTG
GGAATTATGGAAGCACAGGAATGCTTGTGTGCTGAGGGAGCAAACCCAGTATTCCTATGG
TTTTACAAGTGGTGGCTAGTGCAAGTCGTTTGCGGTGCTTTGCTGGAGCTTCAGCACTCC
ACAAATTGCTCCAGTGGTCGCGTATCCTGGATACTTAGCCCACCCTGGGGTAGTGTGTGG
TAGTGGTCACTGTTCTTCTGTGTGTGGCGCAACTGTTTTTTGCGTGTGTTCTGGGAGCAA
GCCTGTCAGCCTCTCCTTTGTGTACTTTATTCCTTTCTGAAATGACACGCAGCTCCCCCT
GTATCGTTCGAGAAGAAGAAAAAAGGCAAGCTTATAAATATGTGTTCTTGTGGCTTATAA
GCCAAAACTAAGCCCAACAAAACAACCCTAAGCTTAAGGCAGTAACCTTTGTAAGCTTGC
ACCTCCGTTCAGCACTCAAAGTTAAACCTCAAACGGAGCATAAACTGAGTTTACTGAAAC
AGATTTCAGAGCTTAACTAACAGCTAATGTATAATTTTGTGAAGGGTCCTGAAACTCACT
TTTGGCAGAAAAATTGGACTAGGTTGTTTTCTCTGGCTTCTTTGCCTAGAATAATACTTA
TATTTTGTCAGGACACCATACAAGTAACCCTGTAACACCGATGCTAGAAGACACCAACAG
GCAAATTAACAACTCTGGCATTCCTCCATCTCTGTTGGTGATATACTATATTCCAATGAA
GTAACTTATGCCGGACTTCACTAAGTCCACGCAGGTTAATCCTCCAACAATAAAATCTTA
TAAGTATATCCAACCATTTAAACAATCAAAGCTTGTCCGCTGGGAGAAGTGTATAAGAAG
TTGAACCAACAAGTCTACTGATGTACTATAACATATACATAACAAAAGAGAACTCATAGT
TCTCTTCACACAGATTCAACAATTGCATGCATTCACATCATGTGCTAGTTTTAGATATAA
ATATATCTTCCACATATGAGCATGTGCACACCAAAAGTTATACGATAGCTATGCTTATAG
CCCTATACTTGCATGTAACAGTCCTCAGTTCAAAAAAACAGCCCCTCGGTTACTAGCTTA
ATAGGTACTCCCTCCATGCTTGAAAAGAAGACATACAAGTTTTGCCTAAAGGCGCAAAGT
TTGAATTGAGTTTGTAGGAGAAACTATCAACAACAATACTAGATAGGTATAATATGAAAG
CATAATTTTATTGTACATTCAGTTATACTAATTTGGTATTGTAGTTGTTGATAGTTTTTG
TATAAACTTGGTGAAGCCTGACACTGCTGGACTTCAATCAAAATTTGTAAGCCTTCTTTT
CAAGCACGGAGGGAGTACATAATTGTGTTACACAGTTCTAGTAGTCCCATGACACGTTTA
ATGTACCATCTGACCATCTCGTCAGCAATAGCCTAATCCATTAGAATATCAGTGCACATA
GCACAGTTTGGATTTAAAATATGCATGAATACAACTTTGGGGATGGGGAAATACAATTAA
AAATAGTAATGGCGTACCCCAGACTGTTCCTTCCTTGTCTTGATGTATACCGATGCATAT
GGCCGCAAATGCGCCAAGAAATCAGCAGGGTCAGGTTTTAGTGGCTGTGAGAAGGAACTA
GATTAATAAAGTTCTGGCCATGCCTCCCAAAAAAGAAAATTAATGCACAAACCTGAAAAA
CTGCACACCCTTCAGCTAACTCACGGGCACTTGTTAGCAGTAGCTCCTTGTGGTTGTGGT
GCTAGAAAATGTTACTTTATTTAGCTTGCAACATAGGCGGAAAAAAAAAGGTAGGATACA
TATGAAACAACTTCAAGACAACATAATAACCTCACGTATCAAGGGATGAAACTGAGGCTC
CCAGAAAACCAACAACCAATCAAGGAAAATCTACAAGAGAGATAGTCAGTCCAACCTTCC
GTCAAATAAATTACAGAGTAAACTAATACTTACATCAACTGCCCTTAGTGCATAAACTTC
CCAAAGGTCAGATTGTGGATGACAGCTTTCCTCAAGACGATCCATAACATCATCCGGACA
ATCATTTTGCTGTAAATGATAGACAAGTTAGGGATGTCCCTGTTACAGAAAAGTAAGAAC
CAGGTCAAATACCTTAATGTAAGGTTTCAGATTGATAAGTTGGACCAAAAATTTGTAGAT
CTCATCAGTACGTCGCCGACAGCATACATCACGCTCCTTTCTCTTAAAAAACAACAAAAT
AAACTAACATCAAACAGGGATAAAATGCACGTGCATATTGCAAGCTGAAGGTTATCAAGA
ATACAGTACTCACCGGTAGCATACGGGACATGATTTGCAAATAAGGATGTTGCAAGCTGT
TAATGGCATACTTTGCCTTAAACTCTGGGTTCAATCTCTCAAGAAGAGCATCCCCATTTA
AATATTTATGCTGCAAAATTAGTTCATTGGTGCAACTTACAGAGCTACAGTTTTATTAAC
AAAATATAAAGTCATAAAAAATTGTAGTGTTCTTAAATTAATCCCCAATAAAGTTATGTT
GTACCGTACAAAACAAAGCTTTTGAAGGCAACTCCAGAAGGTAATACCTGTAGGAACGGG
AGGGAGAGAGGAGTACCTCCAGCAGCTGTGTTTTGTGTGTGGCGGCTAGTTCTGGGAACG
GGATGGCTGGGAGCCTCCTTTTATGTCAGTCCCACTACATGGGCCTGGGCCCTAAGAGAT
AACTTGATGGGCTGGGCCATACCGGTTCAACACTCCCCCTCAAGATGGGTGGTAGATATC
TATCATTC